메뉴 건너뛰기




Volumn 9, Issue , 2009, Pages

Mass spectrometry analysis of the variants of histone H3 and H4 of soybean and their post-translational modifications

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; GLYCINE MAX;

EID: 69549084781     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-9-98     Document Type: Article
Times cited : (37)

References (47)
  • 2
    • 33646048752 scopus 로고    scopus 로고
    • Chromosomal histone modification patterns - From conservation to diversity
    • 10.1016/j.tplants.2006.02.008 16546438
    • Chromosomal histone modification patterns - from conservation to diversity. J Fuchs D Demidov A Houben I Schubert, Trends Plant Sci 2006 11 199 208 10.1016/j.tplants.2006.02.008 16546438
    • (2006) Trends Plant Sci , vol.11 , pp. 199-208
    • Fuchs, J.1    Demidov, D.2    Houben, A.3    Schubert, I.4
  • 3
    • 13544271154 scopus 로고    scopus 로고
    • Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications
    • DOI 10.1093/nar/gkh992
    • Mass spectrometry analysis of Arabidopsis histone H3 reveals distinct combinations of post-translational modifications. L Johnson S Mollah BA Garcia TL Muratore J Shabanowitz DF Hunt SE Jacobsen, Nucleic Acids Res 2004 32 6511 6518 15598823 10.1093/nar/gkh992 (Pubitemid 40220362)
    • (2004) Nucleic Acids Research , vol.32 , Issue.22 , pp. 6511-6518
    • Johnson, L.1    Mollah, S.2    Garcia, B.A.3    Muratore, T.L.4    Shabanowitz, J.5    Hunt, D.F.6    Jacobsen, S.E.7
  • 5
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin Modifications and Their Function
    • DOI 10.1016/j.cell.2007.02.005, PII S0092867407001845
    • Chromatin modifications and their function. T Kouzarides, Cell 2007 128 693 705 10.1016/j.cell.2007.02.005 17320507 (Pubitemid 46273577)
    • (2007) Cell , vol.128 , Issue.4 , pp. 693-705
    • Kouzarides, T.1
  • 6
    • 33847386172 scopus 로고    scopus 로고
    • The Site-Specific Installation of Methyl-Lysine Analogs into Recombinant Histones
    • DOI 10.1016/j.cell.2006.12.041, PII S0092867407001158
    • The site-specific installation of methyl-Lysine analogs into recombinant histones. MD Simon F Chu LR Racki CC de la Cruz AL Burlingame B Panning GJ Narlikar KM Shokat, Cell 2007 128 1003 1012 10.1016/j.cell.2006.12.041 17350582 (Pubitemid 46341408)
    • (2007) Cell , vol.128 , Issue.5 , pp. 1003-1012
    • Simon, M.D.1    Chu, F.2    Racki, L.R.3    De La Cruz, C.C.4    Burlingame, A.L.5    Panning, B.6    Narlikar, G.J.7    Shokat, K.M.8
  • 7
    • 0842324785 scopus 로고    scopus 로고
    • The Nucleosome: From Genomic Organization to Genomic Regulation
    • DOI 10.1016/S0092-8674(04)00044-3
    • The nucleosome: from genomic organization to genomic regulation. S Khorasanizadeh, Cell 2004 116 259 272 10.1016/S0092-8674(04)00044-3 14744436 (Pubitemid 38167316)
    • (2004) Cell , vol.116 , Issue.2 , pp. 259-272
    • Khorasanizadeh, S.1
  • 8
    • 37249034083 scopus 로고    scopus 로고
    • Coupling and coordination in gene expression processes: A systems biology view
    • DOI 10.1038/nrg2223, PII NRG2223
    • Coupling and coordination in gene expression processes: a systems biology view. S Komili PA Silver, Nat Rev Genet 2008 9 38 48 10.1038/nrg2223 18071322 (Pubitemid 350277299)
    • (2008) Nature Reviews Genetics , vol.9 , Issue.1 , pp. 38-48
    • Komili, S.1    Silver, P.A.2
  • 9
    • 34249299791 scopus 로고    scopus 로고
    • The complex language of chromatin regulation during transcription
    • DOI 10.1038/nature05915, PII NATURE05915
    • The complex language of chromatin regulationduring transcription. SL Berger, Nature 2007 447 407 412 10.1038/nature05915 17522673 (Pubitemid 46816746)
    • (2007) Nature , vol.447 , Issue.7143 , pp. 407-412
    • Berger, S.L.1
  • 10
    • 33847070442 scopus 로고    scopus 로고
    • The Role of Chromatin during Transcription
    • DOI 10.1016/j.cell.2007.01.015, PII S0092867407001092
    • The role of chromatin during transcription. B Li M Carey JL Workman, Cell 2007 128 707 719 10.1016/j.cell.2007.01.015 17320508 (Pubitemid 46273570)
    • (2007) Cell , vol.128 , Issue.4 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 12
    • 33847070442 scopus 로고    scopus 로고
    • The Role of Chromatin during Transcription
    • DOI 10.1016/j.cell.2007.01.015, PII S0092867407001092
    • The role of chromatin during transcription. B Li M Carey JL Workman, Cell 2007 128 707 719 10.1016/j.cell.2007.01.015 17320508 (Pubitemid 46273570)
    • (2007) Cell , vol.128 , Issue.4 , pp. 707-719
    • Li, B.1    Carey, M.2    Workman, J.L.3
  • 13
    • 0035815360 scopus 로고    scopus 로고
    • Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly
    • DOI 10.1126/science.1060118
    • Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly. J Nakayama JC Rice BD Strahl CD Allis SI Grewal, Science 2001 292 110 113 10.1126/science.1060118 11283354 (Pubitemid 32289138)
    • (2001) Science , vol.292 , Issue.5514 , pp. 110-113
    • Nakayama, J.1    Rice, J.C.2    Strahl, B.D.3    Allis, C.D.4    Grewal, S.I.S.5
  • 14
    • 0037143444 scopus 로고    scopus 로고
    • Interplay between two epigenetic marks: DNA methylation and histone H3 lysine 9 methylation
    • DOI 10.1016/S0960-9822(02)00976-4, PII S0960982202009764
    • Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation. L Johnson X Cao S Jacobsen, Curr Biol 2002 12 1360 1367 10.1016/S0960-9822(02)00976-4 12194816 (Pubitemid 34915537)
    • (2002) Current Biology , vol.12 , Issue.16 , pp. 1360-1367
    • Johnson, L.M.1    Cao, X.2    Jacobsen, S.E.3
  • 15
    • 0036499971 scopus 로고    scopus 로고
    • Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing
    • DOI 10.1093/emboj/21.5.1121
    • Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing. G Schotta A Ebert V Krauss A Fischer J Hoffmann S Rea T Jenuwein R Dorn G Reuter, EMBO J 2002 21 1121 1131 11867540 10.1093/emboj/21.5.1121 (Pubitemid 34206185)
    • (2002) EMBO Journal , vol.21 , Issue.5 , pp. 1121-1131
    • Schotta, G.1    Ebert, A.2    Krauss, V.3    Fischer, A.4    Hoffmann, J.5    Rea, S.6    Jenuwein, T.7    Dorn, R.8    Reuter, G.9
  • 17
    • 43249091345 scopus 로고    scopus 로고
    • Distinctive core histone post-translational modification patterns in Arabidopsis thaliana
    • DOI 10.1371/journal.pone.0001210
    • Distinctive Core Histone Post-Translational Modification Patterns in Arabidopsis thaliana. K Zhang VV Sridhar J Zhu A Kapoor JK Zhu, PLoS ONE 2007 2 e1210 18030344 10.1371/journal.pone.0001210 (Pubitemid 351649979)
    • (2007) PLoS ONE , vol.2 , Issue.11
    • Zhang, K.1    Sridhar, V.V.2    Zhu, J.3    Kapoor, A.4    Zhu, J.-K.5
  • 18
    • 34948813595 scopus 로고    scopus 로고
    • Characterization of post-translational modifications of histone H2B-variants isolated from Arabidopsis thaliana
    • DOI 10.1021/pr0702159
    • Characterization of post-translational modifications of histone H2B-variants isolated from Arabidopsis thaliana. E Bergmuller PM Gehrig W Gruissem, J Proteome Res 2007 6 3655 3668 10.1021/pr0702159 17691833 (Pubitemid 47522755)
    • (2007) Journal of Proteome Research , vol.6 , Issue.9 , pp. 3655-3668
    • Bergmuller, E.1    Gehrig, P.M.2    Gruissem, W.3
  • 19
    • 42549085238 scopus 로고    scopus 로고
    • The epigenetic landscape of plants
    • DOI 10.1126/science.1153996
    • The epigenetic landscape of plants. X Zhang, Science 2008 320 489 492 10.1126/science.1153996 18436779 (Pubitemid 351590632)
    • (2008) Science , vol.320 , Issue.5875 , pp. 489-492
    • Zhang, X.1
  • 20
    • 34249787308 scopus 로고    scopus 로고
    • Roles of dynamic and reversible histone acetylation in plant development and polyploidy
    • 17556080
    • Roles of dynamic and reversible histone acetylation in plant development and polyploidy. ZJ Chen L Tian, Biochim Biophys Acta 2007 1769 295 307 17556080
    • (2007) Biochim Biophys Acta , vol.1769 , pp. 295-307
    • Chen, Z.J.1    Tian, L.2
  • 21
    • 38649111293 scopus 로고    scopus 로고
    • Histone arginine methylation is required for vernalization-induced epigenetic silencing of FLC in winter-annual Arabidopsis thaliana
    • DOI 10.1073/pnas.0710423104
    • Histone arginine methylation is required for vernalization-induced epigenetic silencing of FLC in winter-annual Arabidopsis thaliana. RJ Schmitz S Sung RM Amasino, Proc Natl Acad Sci USA 2008 105 411 416 18178621 10.1073/pnas.0710423104 (Pubitemid 351171788)
    • (2008) Proceedings of the National Academy of Sciences of the United States of America , vol.105 , Issue.2 , pp. 411-416
    • Schmitz, R.J.1    Sung, S.2    Amasino, R.M.3
  • 22
    • 0345189367 scopus 로고    scopus 로고
    • Regulation of Flowering Time by Histone Acetylation in Arabidopsis
    • DOI 10.1126/science.1091109
    • Regulation of flowering time by histone acetylation in Arabidopsis. Y He SD Michaels RM Amasino, Science 2003 302 1751 1754 10.1126/science.1091109 14593187 (Pubitemid 37505736)
    • (2003) Science , vol.302 , Issue.5651 , pp. 1751-1754
    • He, Y.1    Michaels, S.D.2    Amasino, R.M.3
  • 23
    • 38949126530 scopus 로고    scopus 로고
    • Di- and tri- but not monomethylation on histone H3 lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana
    • DOI 10.1128/MCB.01607-07
    • Di- and tri- but not mono-methylation on histone H3 Lysine 36 marks active transcription of genes involved in flowering time regulation and other processes in Arabidopsis thaliana. L Xu Z Zhao A Dong L Soubigou-Taconnat JP Renou A Steinmetz WH Shen, Mol Cell Biol 2008 28 1348 1360 18070919 10.1128/MCB.01607-07 (Pubitemid 351214136)
    • (2008) Molecular and Cellular Biology , vol.28 , Issue.4 , pp. 1348-1360
    • Xu, L.1    Zhao, Z.2    Dong, A.3    Soubigou-Taconnat, L.4    Renou, J.-P.5    Steinmetz, A.6    Shen, W.-H.7
  • 24
    • 48249095591 scopus 로고    scopus 로고
    • Arabidopsis Trithorax1 dynamically regulates Flowering Locus C activation via histone 3 lysine 4 trimethylation
    • DOI 10.1105/tpc.108.058172
    • ARABIDOPSIS TRITHORAX1 Dynamically Regulates FLOWERING LOCUS C Activation via Histone 3 Lysine 4 Trimethylation. S Pien D Fleury JS Mylne P Crevillen D Inzé Z Avramova C Dean U Grossniklaus, Plant Cell 2008 20 580 588 18375656 10.1105/tpc.108.058172 (Pubitemid 352843994)
    • (2008) Plant Cell , vol.20 , Issue.3 , pp. 580-588
    • Pien, S.1    Fleury, D.2    Mylne, J.S.3    Crevillen, P.4    Inze, D.5    Avramova, Z.6    Dean, C.7    Grossniklaus, U.8
  • 25
    • 11844260676 scopus 로고    scopus 로고
    • Role of chromatin modification in flowering-time control
    • DOI 10.1016/j.tplants.2004.11.003, PII S1360138504002705
    • Role of chromatin modification in flowering-time control. Y He RM Amasino, Trends Plant Sci 2005 10 30 35 10.1016/j.tplants.2004.11.003 15642521 (Pubitemid 40084626)
    • (2005) Trends in Plant Science , vol.10 , Issue.1 , pp. 30-35
    • He, Y.1    Amasino, R.M.2
  • 26
    • 36849067000 scopus 로고    scopus 로고
    • Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications
    • DOI 10.1007/s00425-007-0612-1
    • Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications. A Sokol A Kwiatkowska A Jerzmanowski M Prymakowska-Bosak, Planta 2007 227 245 254 10.1007/s00425-007-0612-1 17721787 (Pubitemid 350222841)
    • (2007) Planta , vol.227 , Issue.1 , pp. 245-254
    • Sokol, A.1    Kwiatkowska, A.2    Jerzmanowski, A.3    Prymakowska-Bosak, M.4
  • 29
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • DOI 10.1126/science.1063127
    • Translating the histone code. T Jenuwein CD Allis, Science 2001 293 1074 1080 10.1126/science.1063127 11498575 (Pubitemid 32758077)
    • (2001) Science , vol.293 , Issue.5532 , pp. 1074-1080
    • Jenuwein, T.1    Allis, C.D.2
  • 32
    • 34249026300 scopus 로고    scopus 로고
    • High-Resolution Profiling of Histone Methylations in the Human Genome
    • DOI 10.1016/j.cell.2007.05.009, PII S0092867407006009
    • High-resolution profiling of histone methylations in the human genome. A Barski S Cuddapah K Cui TY Roh DE Schones Z Wang G Wei I Chepelev K Zhao, Cell 2007 129 823 837 10.1016/j.cell.2007.05.009 17512414 (Pubitemid 46802390)
    • (2007) Cell , vol.129 , Issue.4 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.-Y.4    Schones, D.E.5    Wang, Z.6    Wei, G.7    Chepelev, I.8    Zhao, K.9
  • 33
    • 35848955414 scopus 로고    scopus 로고
    • In vitro specificities of Arabidopsis co-activator histone acetyltransferases: Implications for histone hyperacetylation in gene activation
    • DOI 10.1111/j.1365-313X.2007.03264.x
    • In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. KW Earley MS Shook B Brower-Toland L Hicks CS Pikaard, Plant J 2007 52 615 626 10.1111/j.1365-313X.2007.03264.x 17877703 (Pubitemid 350060589)
    • (2007) Plant Journal , vol.52 , Issue.4 , pp. 615-626
    • Earley, K.W.1    Shook, M.S.2    Brower-Toland, B.3    Hicks, L.4    Pikaard, C.S.5
  • 35
    • 8844248619 scopus 로고    scopus 로고
    • Methylation of histone H4 lysine 20 controls recruitment of Crb2 to sites of DNA damage
    • DOI 10.1016/j.cell.2004.11.009, PII S0092867404010530
    • Methylation of histone H4 Lysine 20 controls recruitment of Crb2 to sites of DNA damage. SL Sanders M Portoso J Mata J Bahler RC Allshire T Kouzarides, Cell 2004 119 603 614 10.1016/j.cell.2004.11.009 15550243 (Pubitemid 39535749)
    • (2004) Cell , vol.119 , Issue.5 , pp. 603-614
    • Sanders, S.L.1    Portoso, M.2    Mata, J.3    Bahler, J.4    Allshire, R.C.5    Kouzarides, T.6
  • 37
    • 0037512273 scopus 로고    scopus 로고
    • The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II
    • DOI 10.1074/jbc.M212134200
    • The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II. B Li L Howe S Anderson JR Yates 3rd JL Workman, J Biol Chem 2003 278 8897 8903 10.1074/jbc.M212134200 12511561 (Pubitemid 36800365)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.11 , pp. 8897-8903
    • Li, B.1    Howe, L.2    Anderson, S.3    Yates III, J.R.4    Workman, J.L.5
  • 38
    • 0345826148 scopus 로고    scopus 로고
    • Vernalization requires epigenetic silencing of FLC by histone methylation
    • DOI 10.1038/nature02269
    • Vernalization requires epigenetic silencing of FLC by histone methylation. R Bastow JS Mylne C Lister Z Lippman RA Martienssen C Dean, Nature 2004 427 164 167 10.1038/nature02269 14712277 (Pubitemid 38094957)
    • (2004) Nature , vol.427 , Issue.6970 , pp. 164-167
    • Bastow, R.1    Mylne, J.S.2    Lister, C.3    Lippman, Z.4    Martienssen, R.A.5    Dean, C.6
  • 39
    • 33947274529 scopus 로고    scopus 로고
    • Propagation of centromeric chromatin requires exit from mitosis
    • DOI 10.1083/jcb.200701066
    • Propagation of centromeric chromatin requires exit from mitosis. LE Jansen BE Black DR Foltz DW Cleveland, J Cell Biol 2007 176 795 805 17339380 10.1083/jcb.200701066 (Pubitemid 46425540)
    • (2007) Journal of Cell Biology , vol.176 , Issue.6 , pp. 795-805
    • Jansen, L.E.T.1    Black, B.E.2    Foltz, D.R.3    Cleveland, D.W.4
  • 40
    • 33750740399 scopus 로고    scopus 로고
    • The nucleosome: A little variation goes a long way
    • DOI 10.1139/O06-085
    • The nucleosome: a little variation goes a long way. E Bernstein SB Hake, Biochem Cell Biol 2006 84 505 517 10.1139/O06-085 16936823 (Pubitemid 44703654)
    • (2006) Biochemistry and Cell Biology , vol.84 , Issue.4 , pp. 505-517
    • Bernstein, E.1    Hake, S.B.2
  • 43
    • 33745272549 scopus 로고    scopus 로고
    • Isolation of nuclear proteins
    • 16739594
    • Isolation of nuclear proteins. TT Calikowski I Meier, Methods Mol Biol 2006 323 393 402 16739594
    • (2006) Methods Mol Biol , vol.323 , pp. 393-402
    • Calikowski, T.T.1    Meier, I.2
  • 44
    • 34250782684 scopus 로고    scopus 로고
    • Extraction, purification and analysis of histones
    • DOI 10.1038/nprot.2007.202, PII NPROT.2007.202
    • Extraction, purification and analysis of histones. D Shechter HL Dormann CD Allis SB Hake, Nat Protoc 2007 2 1445 1457 10.1038/nprot.2007.202 17545981 (Pubitemid 46952324)
    • (2007) Nature Protocols , vol.2 , Issue.6 , pp. 1445-1457
    • Shechter, D.1    Dormann, H.L.2    Allis, C.D.3    Hake, S.B.4
  • 45
    • 55749086829 scopus 로고    scopus 로고
    • Developmental and environmental signals induce distinct histone acetylation profiles on distal and proximal promoter elements of the C4-Pepc gene in maize
    • 18689888 10.1534/genetics.108.087411
    • Developmental and environmental signals induce distinct histone acetylation profiles on distal and proximal promoter elements of the C4-Pepc gene in maize. S Offermann B Dreesen I Horst T Danker M Jaskiewicz C Peterhansel, Genetics 2008 179 1891 1901 18689888 10.1534/genetics.108.087411
    • (2008) Genetics , vol.179 , pp. 1891-1901
    • Offermann, S.1    Dreesen, B.2    Horst, I.3    Danker, T.4    Jaskiewicz, M.5    Peterhansel, C.6
  • 47
    • 34247221117 scopus 로고    scopus 로고
    • SKB1-mediated symmetric dimethylation of histone H4R3 controls flowering time in Arabidopsis
    • DOI 10.1038/sj.emboj.7601647, PII 7601647
    • SKB1-mediated symmetric dimethylation of histone H4R3 controls flowering time in Arabidopsis. X Wang Y Zhang Q Ma Z Zhang Y Xue S Bao K Chong, EMBO J 2007 26 1934 1941 17363895 10.1038/sj.emboj.7601647 (Pubitemid 46624058)
    • (2007) EMBO Journal , vol.26 , Issue.7 , pp. 1934-1941
    • Wang, X.1    Zhang, Y.2    Ma, Q.3    Zhang, Z.4    Xue, Y.5    Bao, S.6    Chong, K.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.