-
1
-
-
0031010579
-
Evidence for a clade of nematodes, arthropods and other moulting animals
-
10.1038/387489a0 9168109
-
Aguinaldo AM Turbeville JM Linford LS Rivera MC Garey JR Raff RA et al Evidence for a clade of nematodes, arthropods and other moulting animals Nature 1997, 387:489-493. 10.1038/387489a0 9168109
-
(1997)
Nature
, vol.387
, pp. 489-493
-
-
Aguinaldo, A.M.1
Turbeville, J.M.2
Linford, L.S.3
Rivera, M.C.4
Garey, J.R.5
Raff, R.A.6
-
2
-
-
3242690862
-
The new view of animal phylogeny
-
10.1146/annurev.ecolsys.35.112202.130124
-
Halanych KM The new view of animal phylogeny Annu Rev Ecol Syst 2004, 35:229-256. 10.1146/annurev.ecolsys.35.112202.130124
-
(2004)
Annu Rev Ecol Syst
, vol.35
, pp. 229-256
-
-
Halanych, K.M.1
-
3
-
-
33746693659
-
Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch
-
10.1016/j.ympev.2006.04.021 16781168
-
Mallatt J Giribet G Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch Mol Phylogenet Evol 2006, 40:772-794. 10.1016/j.ympev.2006.04.021 16781168
-
(2006)
Mol Phylogenet Evol
, vol.40
, pp. 772-794
-
-
Mallatt, J.1
Giribet, G.2
-
4
-
-
0347457283
-
Ecdysozoan phylogeny and Bayesian inference: First use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin
-
10.1016/j.ympev.2003.07.013 15019618
-
Mallatt JM Garey JR Shultz JW Ecdysozoan phylogeny and Bayesian inference: First use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin Mol Phylogenet Evol 2004, 31:178-191. 10.1016/j.ympev.2003.07.013 15019618
-
(2004)
Mol Phylogenet Evol
, vol.31
, pp. 178-191
-
-
Mallatt, J.M.1
Garey, J.R.2
Shultz, J.W.3
-
5
-
-
0036184428
-
Testing the new animal phylogeny: First use of combined large-subunit and small-subunit rRNA gene sequences to classify the protostomes
-
11861888
-
Mallatt J Winchell CJ Testing the new animal phylogeny: First use of combined large-subunit and small-subunit rRNA gene sequences to classify the protostomes Mol Biol Evol 2002, 19:289-301. 11861888
-
(2002)
Mol Biol Evol
, vol.19
, pp. 289-301
-
-
Mallatt, J.1
Winchell, C.J.2
-
6
-
-
0036097948
-
Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data
-
11961109
-
Winchell CJ Sullivan J Cameron CB Swalla BJ Mallatt J Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data Mol Biol Evol 2002, 19:762-776. 11961109
-
(2002)
Mol Biol Evol
, vol.19
, pp. 762-776
-
-
Winchell, C.J.1
Sullivan, J.2
Cameron, C.B.3
Swalla, B.J.4
Mallatt, J.5
-
7
-
-
38349163697
-
The complete mitochondrial genome of the onychophoran Epiperipatus biolleyi reveals a unique transfer RNA set and provides further support for the ecdysozoa hypothesis
-
10.1093/molbev/msm223 17934206
-
Podsiadlowski L Braband A Mayer G The complete mitochondrial genome of the onychophoran Epiperipatus biolleyi reveals a unique transfer RNA set and provides further support for the ecdysozoa hypothesis Mol Biol Evol 2008, 25:42-51. 10.1093/molbev/msm223 17934206
-
(2008)
Mol Biol Evol
, vol.25
, pp. 42-51
-
-
Podsiadlowski, L.1
Braband, A.2
Mayer, G.3
-
8
-
-
33750445991
-
Mitogenomics and phylogenomics reveal priapulid worms as extant models of the ancestral Ecdysozoan
-
10.1111/j.1525-142X.2006.00123.x 17073934
-
Webster BL Copley RR Jenner RA kenzie-Dodds JA Bourlat SJ Rota-Stabelli O et al Mitogenomics and phylogenomics reveal priapulid worms as extant models of the ancestral Ecdysozoan Evol Dev 2006, 8:502-510. 10.1111/ j.1525-142X.2006.00123.x 17073934
-
(2006)
Evol Dev
, vol.8
, pp. 502-510
-
-
Webster, B.L.1
Copley, R.R.2
Jenner, R.A.3
Kenzie-Dodds, J.A.4
Bourlat, S.J.5
Rota-Stabelli, O.6
-
9
-
-
33750585486
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida
-
10.1038/nature05241 17051155
-
Bourlat SJ Juliusdottir T Lowe CJ Freeman R Aronowicz J Kirschner M et al Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida Nature 2006, 444:85-88. 10.1038/nature05241 17051155
-
(2006)
Nature
, vol.444
, pp. 85-88
-
-
Bourlat, S.J.1
Juliusdottir, T.2
Lowe, C.J.3
Freeman, R.4
Aronowicz, J.5
Kirschner, M.6
-
10
-
-
37549050188
-
Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta
-
10.1093/molbev/msm214 17921486
-
Hausdorf B Helmkampf M Meyer A Witek A Herlyn H Bruchhaus I et al Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta Mol Biol Evol 2007, 24:2723-2729. 10.1093/ molbev/msm214 17921486
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2723-2729
-
-
Hausdorf, B.1
Helmkampf, M.2
Meyer, A.3
Witek, A.4
Herlyn, H.5
Bruchhaus, I.6
-
12
-
-
42149157760
-
Broad phylogenomic sampling improves resolution of the animal tree of life
-
10.1038/nature06614 18322464
-
Dunn CW Hejnol A Matus DQ Pang K Browne WE Smith SA et al Broad phylogenomic sampling improves resolution of the animal tree of life Nature 2008, 452:745-765. 10.1038/nature06614 18322464
-
(2008)
Nature
, vol.452
, pp. 745-765
-
-
Dunn, C.W.1
Hejnol, A.2
Matus, D.Q.3
Pang, K.4
Browne, W.E.5
Smith, S.A.6
-
13
-
-
40849113099
-
Phylogenetic position of nemertea derived from phylogenomic data
-
10.1093/molbev/msn019 18222945
-
Struck TH Fisse F Phylogenetic position of nemertea derived from phylogenomic data Mol Biol Evol 2008, 25:728-736. 10.1093/molbev/msn019 18222945
-
(2008)
Mol Biol Evol
, vol.25
, pp. 728-736
-
-
Struck, T.H.1
Fisse, F.2
-
14
-
-
0029527107
-
Nemertean genera and species of the world: An annotated checklist of original names and description citations, synonyms, current taxonomic status, habitats and recorded zoogeographic distribution
-
10.1080/00222939500770161
-
Gibson T Nemertean genera and species of the world: An annotated checklist of original names and description citations, synonyms, current taxonomic status, habitats and recorded zoogeographic distribution J Nat Hist 1995, 29:271-562. 10.1080/00222939500770161
-
(1995)
J Nat Hist
, vol.29
, pp. 271-562
-
-
Gibson, T.1
-
16
-
-
3042854699
-
Vestigial prototroch in a basal nemertean, Carinoma tremaphoros (Nemertea; Palaeonemertea)
-
10.1111/j.1525-142X.2004.04027.x
-
Maslakova SA Martindale MQ Norenburg JL Vestigial prototroch in a basal nemertean, Carinoma tremaphoros (Nemertea; Palaeonemertea) Evol Dev 2004, 6:226. 10.1111/j.1525-142X.2004.04027.x
-
(2004)
Evol Dev
, vol.6
, pp. 226
-
-
Maslakova, S.A.1
Martindale, M.Q.2
Norenburg, J.L.3
-
17
-
-
0036625772
-
Progress in nemertean biology: Development and phylogeny
-
10.1093/icb/42.3.692
-
Turbeville JM Progress in nemertean biology: Development and phylogeny Integr Comp Biol 2002, 42:692-703. 10.1093/icb/42.3.692
-
(2002)
Integr Comp Biol
, vol.42
, pp. 692-703
-
-
Turbeville, J.M.1
-
18
-
-
0026510079
-
Phylogenetic position of phylum Nemertini, inferred from 18S rRNA sequences: Molecular data as a test of morphological character homology
-
1560760
-
Turbeville JM Field KG Raff RA Phylogenetic position of phylum Nemertini, inferred from 18S rRNA sequences: Molecular data as a test of morphological character homology Mol Biol Evol 1992, 9:235-249. 1560760
-
(1992)
Mol Biol Evol
, vol.9
, pp. 235-249
-
-
Turbeville, J.M.1
Field, K.G.2
Raff, R.A.3
-
19
-
-
33745135433
-
Lophotrochozoan phylogeny assessed with LSU and SSU data: Evidence of lophophorate polyphyly
-
10.1016/j.ympev.2006.02.001 16556507
-
Passamaneck Y Halanych KM Lophotrochozoan phylogeny assessed with LSU and SSU data: Evidence of lophophorate polyphyly Mol Phylogenet Evol 2006, 40:20-28. 10.1016/j.ympev.2006.02.001 16556507
-
(2006)
Mol Phylogenet Evol
, vol.40
, pp. 20-28
-
-
Passamaneck, Y.1
Halanych, K.M.2
-
20
-
-
34248642565
-
The partial mitochondrial genome of the Cephalothrix rufifrons (Nemertea, Palaeonemertea): Characterization and implications for the phylogenetic position of Nemertea
-
10.1016/j.ympev.2006.10.025 17210260
-
Turbeville JM Smith DM The partial mitochondrial genome of the Cephalothrix rufifrons (Nemertea, Palaeonemertea): Characterization and implications for the phylogenetic position of Nemertea Mol Phylogenet Evol 2007, 43:1056-1065. 10.1016/j.ympev.2006.10.025 17210260
-
(2007)
Mol Phylogenet Evol
, vol.43
, pp. 1056-1065
-
-
Turbeville, J.M.1
Smith, D.M.2
-
21
-
-
37249017533
-
Multigene analysis of lophophorate and chaetognath phylogenetic relationships
-
10.1016/j.ympev.2007.09.004 17937996
-
Helmkampf M Bruchhaus I Hausdorf B Multigene analysis of lophophorate and chaetognath phylogenetic relationships Mol Phylogenet Evol 2008, 46:206-214. 10.1016/j.ympev.2007.09.004 17937996
-
(2008)
Mol Phylogenet Evol
, vol.46
, pp. 206-214
-
-
Helmkampf, M.1
Bruchhaus, I.2
Hausdorf, B.3
-
22
-
-
0034350325
-
Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Plathelminthes, and Chaetognatha: A combined approach of 18S rDNA sequences and morphology
-
10.1080/10635159950127385 12116426
-
Giribet G Distel DL Polz M Sterrer W Wheeler WC Triploblastic relationships with emphasis on the acoelomates and the position of Gnathostomulida, Cycliophora, Plathelminthes, and Chaetognatha: A combined approach of 18S rDNA sequences and morphology Syst Biol 2000, 49:539-562. 10.1080/10635159950127385 12116426
-
(2000)
Syst Biol
, vol.49
, pp. 539-562
-
-
Giribet, G.1
Distel, D.L.2
Polz, M.3
Sterrer, W.4
Wheeler, W.C.5
-
23
-
-
0034945410
-
Animal phylogeny and the ancestry of bilaterians: Inferences from morphology and 18S rDNA gene sequences
-
10.1046/j.1525-142x.2001.003003170.x 11440251
-
Peterson KJ Eernisse DJ Animal phylogeny and the ancestry of bilaterians: Inferences from morphology and 18S rDNA gene sequences Evol Dev 2001, 3:170-205. 10.1046/j.1525-142x.2001.003003170.x 11440251
-
(2001)
Evol Dev
, vol.3
, pp. 170-205
-
-
Peterson, K.J.1
Eernisse, D.J.2
-
24
-
-
46249130006
-
Phylogenomic analyses of lophophorates (brachiopods, phoronids and bryozoans) confirm the Lophotrochozoa concept
-
10.1098/rspb.2008.0372
-
Helmkampf M Bruchhaus I Hausdorf B Phylogenomic analyses of lophophorates (brachiopods, phoronids and bryozoans) confirm the Lophotrochozoa concept Proc R Soc Lond B Biol Sci 2008, 275:1927-1933. 10.1098/rspb.2008.0372
-
(2008)
Proc R Soc Lond B Biol Sci
, vol.275
, pp. 1927-1933
-
-
Helmkampf, M.1
Bruchhaus, I.2
Hausdorf, B.3
-
25
-
-
33745988233
-
The use of genome-level characters for phylogenetic reconstruction
-
10.1016/j.tree.2006.05.009 16762445
-
Boore JL The use of genome-level characters for phylogenetic reconstruction Trends Ecol Evol 2006, 21:439-446. 10.1016/ j.tree.2006.05.009 16762445
-
(2006)
Trends Ecol Evol
, vol.21
, pp. 439-446
-
-
Boore, J.L.1
-
26
-
-
0033595767
-
Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes
-
10.1098/rspb.1999.0885
-
Stechmann A Schlegel M Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes Proc R Soc Lond B Biol Sci 1999, 266:2043-2052. 10.1098/rspb.1999.0885
-
(1999)
Proc R Soc Lond B Biol Sci
, vol.266
, pp. 2043-2052
-
-
Stechmann, A.1
Schlegel, M.2
-
27
-
-
33747350705
-
Lophotrochozoan mitochondrial genomes
-
10.1093/icb/icj056
-
Valles Y Boore JL Lophotrochozoan mitochondrial genomes Integr Comp Biol 2006, 46:544-557. 10.1093/icb/icj056
-
(2006)
Integr Comp Biol
, vol.46
, pp. 544-557
-
-
Valles, Y.1
Boore, J.L.2
-
28
-
-
38849129515
-
The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): High genome plasticity at intra-genus level
-
10.1186/1471-2148-7-155 2220002 17764550
-
Iannelli F Griggio F Pesole G Gissi C The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): High genome plasticity at intra-genus level BMC Evol Biol 2007, 7:155. 10.1186/1471-2148-7-155 2220002 17764550
-
(2007)
BMC Evol Biol
, vol.7
, pp. 155
-
-
Iannelli, F.1
Griggio, F.2
Pesole, G.3
Gissi, C.4
-
29
-
-
0029144398
-
Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris
-
1206728 8536978
-
Boore JL Brown WM Complete sequence of the mitochondrial DNA of the annelid worm Lumbricus terrestris Genetics 1995, 141:305-319. 1206728 8536978
-
(1995)
Genetics
, vol.141
, pp. 305-319
-
-
Boore, J.L.1
Brown, W.M.2
-
30
-
-
0027981455
-
Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata
-
1206160 7828825
-
Boore JL Brown WM Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata Genetics 1994, 138:423-443. 1206160 7828825
-
(1994)
Genetics
, vol.138
, pp. 423-443
-
-
Boore, J.L.1
Brown, W.M.2
-
31
-
-
0028909805
-
Evolution and structural conservation of the control region of insect mitochondrial DNA
-
10.1007/BF00164024 7769615
-
Zhang DX Szymura JM Hewitt GM Evolution and structural conservation of the control region of insect mitochondrial DNA J Mol Evol 1995, 40:382-391. 10.1007/BF00164024 7769615
-
(1995)
J Mol Evol
, vol.40
, pp. 382-391
-
-
Zhang, D.X.1
Szymura, J.M.2
Hewitt, G.M.3
-
32
-
-
33749426647
-
The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features
-
10.1186/1471-2164-7-241 1590035 16987408
-
Kilpert F Podsiadlowski L The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features BMC Genomics 2006, 7:241. 10.1186/1471-2164-7-241 1590035 16987408
-
(2006)
BMC Genomics
, vol.7
, pp. 241
-
-
Kilpert, F.1
Podsiadlowski, L.2
-
33
-
-
0019444843
-
tRNA punctuation model of RNA processing in human mitochondria
-
10.1038/290470a0 7219536
-
Ojala D Montoya J Attardi G tRNA punctuation model of RNA processing in human mitochondria Nature 1981, 290:470-474. 10.1038/290470a0 7219536
-
(1981)
Nature
, vol.290
, pp. 470-474
-
-
Ojala, D.1
Montoya, J.2
Attardi, G.3
-
34
-
-
34547697011
-
Glass sponges and bilaterian animals share derived mitochondrial genomic features: A common ancestry or parallel evolution?
-
10.1093/molbev/msm070 17434903
-
Haen KM Lang BF Pomponi SA Lavrov DV Glass sponges and bilaterian animals share derived mitochondrial genomic features: A common ancestry or parallel evolution? Mol Biol Evol 2007, 24:1518-1527. 10.1093/molbev/ msm070 17434903
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1518-1527
-
-
Haen, K.M.1
Lang, B.F.2
Pomponi, S.A.3
Lavrov, D.V.4
-
35
-
-
0037460766
-
Ribbon worm relationships: A phylogeny of the phylum Nemertea
-
10.1098/rspb.2002.2254
-
Thollesson M Norenburg JL Ribbon worm relationships: A phylogeny of the phylum Nemertea Proc R Soc Lond B Biol Sci 2003, 270:407-415. 10.1098/ rspb.2002.2254
-
(2003)
Proc R Soc Lond B Biol Sci
, vol.270
, pp. 407-415
-
-
Thollesson, M.1
Norenburg, J.L.2
-
36
-
-
34547812067
-
Mitochondrial genome and nuclear sequence data support myzostomida as part of the annelid radiation
-
10.1093/molbev/msm086 17483114
-
Bleidorn C Eeckhaut I Podsiadlowski L Schult N McHugh D Halanych KM et al Mitochondrial genome and nuclear sequence data support myzostomida as part of the annelid radiation Mol Biol Evol 2007, 24:1690-1701. 10.1093/ molbev/msm086 17483114
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1690-1701
-
-
Bleidorn, C.1
Eeckhaut, I.2
Podsiadlowski, L.3
Schult, N.4
McHugh, D.5
Halanych, K.M.6
-
37
-
-
37249024664
-
The mitochondrial genome of Conus textile, coxI-coxII intergenic sequences and Conoidean evolution
-
10.1016/j.ympev.2007.08.002 2718723 17936021
-
Bandyopadhyay PK Stevenson BJ Ownby JP Cady MT Watkins M Olivera BM The mitochondrial genome of Conus textile, coxI-coxII intergenic sequences and Conoidean evolution Mol Phylogenet Evol 2008, 46:215-223. 10.1016/ j.ympev.2007.08.002 2718723 17936021
-
(2008)
Mol Phylogenet Evol
, vol.46
, pp. 215-223
-
-
Bandyopadhyay, P.K.1
Stevenson, B.J.2
Ownby, J.P.3
Cady, M.T.4
Watkins, M.5
Olivera, B.M.6
-
38
-
-
33646066557
-
Rolling circle amplification of metazoan mitochondrial genomes
-
10.1016/j.ympev.2005.11.006 16360323
-
Simison WB Lindberg DR Boore JL Rolling circle amplification of metazoan mitochondrial genomes Mol Phylogenet Evol 2006, 39:562-567. 10.1016/ j.ympev.2005.11.006 16360323
-
(2006)
Mol Phylogenet Evol
, vol.39
, pp. 562-567
-
-
Simison, W.B.1
Lindberg, D.R.2
Boore, J.L.3
-
39
-
-
33746575087
-
Complete mitochondrial DNA sequence of a Conoidean gastropod, Lophiotoma (Xenuroturris) cerithiformis: Gene order and gastropod phylogeny
-
10.1016/j.toxicon.2006.04.013 16806344
-
Bandyopadhyay PK Stevenson BJ Cady MT Olivera BM Wolstenholme DR Complete mitochondrial DNA sequence of a Conoidean gastropod, Lophiotoma (Xenuroturris) cerithiformis: Gene order and gastropod phylogeny Toxicon 2006, 48:29-43. 10.1016/j.toxicon.2006.04.013 16806344
-
(2006)
Toxicon
, vol.48
, pp. 29-43
-
-
Bandyopadhyay, P.K.1
Stevenson, B.J.2
Cady, M.T.3
Olivera, B.M.4
Wolstenholme, D.R.5
-
40
-
-
28244459701
-
Mitochondrial DNA sequence and gene organization in Australian backup abalone Haliotis rubra (leach)
-
10.1007/s10126-005-0013-z 16206015
-
Maynard BT Kerr LJ McKiernan JM Jansen ES Hanna PJ Mitochondrial DNA sequence and gene organization in Australian backup abalone Haliotis rubra (leach) Mar Biotechnol 2005, 7:645-658. 10.1007/s10126-005-0013-z 16206015
-
(2005)
Mar Biotechnol
, vol.7
, pp. 645-658
-
-
Maynard, B.T.1
Kerr, L.J.2
McKiernan, J.M.3
Jansen, E.S.4
Hanna, P.J.5
-
41
-
-
6344268961
-
Long-term conservation of six duplicated structural genes in cephalopod mitochondrial genomes
-
10.1093/molbev/msh227 15297602
-
Yokobori S Fukuda N Nakamura M Aoyama T Oshima T Long-term conservation of six duplicated structural genes in cephalopod mitochondrial genomes Mol Biol Evol 2004, 21:2034-2046. 10.1093/molbev/msh227 15297602
-
(2004)
Mol Biol Evol
, vol.21
, pp. 2034-2046
-
-
Yokobori, S.1
Fukuda, N.2
Nakamura, M.3
Aoyama, T.4
Oshima, T.5
-
42
-
-
1242352073
-
The mitochondrial genome of Phoronis architecta - Comparisons demonstrate that phoronids are lophotrochozoan protostomes
-
10.1093/molbev/msh011 14595093
-
Helfenbein KG Boore JL The mitochondrial genome of Phoronis architecta - comparisons demonstrate that phoronids are lophotrochozoan protostomes Mol Biol Evol 2004, 21:153-157. 10.1093/molbev/msh011 14595093
-
(2004)
Mol Biol Evol
, vol.21
, pp. 153-157
-
-
Helfenbein, K.G.1
Boore, J.L.2
-
43
-
-
42749097173
-
Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: Implications for lophotrochozoan phylogeny
-
10.1016/j.ympev.2008.02.013 18374604
-
Yokobori S Iseto T Asakawa S Sasaki T Shimizu N Yamagishi A et al Complete nucleotide sequences of mitochondrial genomes of two solitary entoprocts, Loxocorone allax and Loxosomella aloxiata: Implications for lophotrochozoan phylogeny Mol Phylogenet Evol 2008, 47:612-628. 10.1016/ j.ympev.2008.02.013 18374604
-
(2008)
Mol Phylogenet Evol
, vol.47
, pp. 612-628
-
-
Yokobori, S.1
Iseto, T.2
Asakawa, S.3
Sasaki, T.4
Shimizu, N.5
Yamagishi, A.6
-
44
-
-
67349159068
-
MtZoa: A general mitochondrial amino acid substitutions model for animal evolutionary studies
-
10.1016/j.ympev.2009.01.011 19475713
-
Rota-Stabelli O Yang Z Telford MJ MtZoa: A general mitochondrial amino acid substitutions model for animal evolutionary studies Mol Phylogenet Evol 2009, 52:268-272. 10.1016/j.ympev.2009.01.011 19475713
-
(2009)
Mol Phylogenet Evol
, vol.52
, pp. 268-272
-
-
Rota-Stabelli, O.1
Yang, Z.2
Telford, M.J.3
-
45
-
-
0028528103
-
DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
-
7881515
-
Folmer O Black M Hoeh W Lutz R Vrijenhoek R DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates Mol Mar Biol Biotechnol 1994, 3:294-299. 7881515
-
(1994)
Mol Mar Biol Biotechnol
, vol.3
, pp. 294-299
-
-
Folmer, O.1
Black, M.2
Hoeh, W.3
Lutz, R.4
Vrijenhoek, R.5
-
46
-
-
0030273578
-
What can molecular genetics contribute to marine biogeography? An urchin's tale
-
10.1016/0022-0981(96)02571-3
-
Palumbi SR What can molecular genetics contribute to marine biogeography? An urchin's tale J Exp Mar Biol Ecol 1996, 203:75-92. 10.1016/0022-0981(96)02571-3
-
(1996)
J Exp Mar Biol Ecol
, vol.203
, pp. 75-92
-
-
Palumbi, S.R.1
-
47
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall TA BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucl Acids Symp Ser 1999, 41:95-98.
-
(1999)
Nucl Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
48
-
-
38349180130
-
ARWEN: A program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
-
10.1093/bioinformatics/btm573 18033792
-
Laslett D Canback B ARWEN: A program to detect tRNA genes in metazoan mitochondrial nucleotide sequences Bioinformatics 2008, 24:172-175. 10.1093/bioinformatics/btm573 18033792
-
(2008)
Bioinformatics
, vol.24
, pp. 172-175
-
-
Laslett, D.1
Canback, B.2
-
49
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
10.1093/nar/25.5.955 146525 9023104
-
Lowe TM Eddy SR tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence Nucleic Acids Res 1997, 25:955-964. 10.1093/nar/25.5.955 146525 9023104
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
50
-
-
0029049426
-
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
-
10.1007/BF01215182 7563121
-
Perna NT Kocher TD Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes J Mol Evol 1995, 41:353-358. 10.1007/BF01215182 7563121
-
(1995)
J Mol Evol
, vol.41
, pp. 353-358
-
-
Perna, N.T.1
Kocher, T.D.2
-
51
-
-
0027968068
-
Clustal-W - Improving the Sensitivity of Progressive Multiple Sequence Alignment Through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice
-
10.1093/nar/22.22.4673 308517 7984417
-
Thompson JD Higgins DG Gibson TJ Clustal-W - Improving the Sensitivity of Progressive Multiple Sequence Alignment Through Sequence Weighting, Position-Specific Gap Penalties and Weight Matrix Choice Nucleic Acids Res 1994, 22:4673-4680. 10.1093/nar/22.22.4673 308517 7984417
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
52
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
10742046
-
Castresana J Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis Mol Biol Evol 2000, 17:540-552. 10742046
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
53
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
10.1093/bioinformatics/btl446 16928733
-
Stamatakis A RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models Bioinformatics 2006, 22:2688-2690. 10.1093/bioinformatics/btl446 16928733
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
54
-
-
50249100595
-
A rapid bootstrap algorithm for the RAxML web servers
-
10.1080/10635150802429642 18853362
-
Stamatakis A Hoover P Rougemont J A rapid bootstrap algorithm for the RAxML web servers Syst Biol 2008, 57:758-771. 10.1080/10635150802429642 18853362
-
(2008)
Syst Biol
, vol.57
, pp. 758-771
-
-
Stamatakis, A.1
Hoover, P.2
Rougemont, J.3
-
55
-
-
13444259388
-
TREEFINDER: A powerful graphical analysis environment for molecular phylogenetics
-
10.1186/1471-2148-4-18 459214 15222900
-
Jobb G von Haeseler A Strimmer K TREEFINDER: A powerful graphical analysis environment for molecular phylogenetics BMC Evol Biol 2004, 4:18. 10.1186/1471-2148-4-18 459214 15222900
-
(2004)
BMC Evol Biol
, vol.4
, pp. 18
-
-
Jobb, G.1
von Haeseler, A.2
Strimmer, K.3
-
56
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
10.1093/bioinformatics/17.8.754 11524383
-
Huelsenbeck JP Ronquist F MRBAYES: Bayesian inference of phylogenetic trees Bioinformatics 2001, 17:754-755. 10.1093/bioinformatics/17.8.754 11524383
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
57
-
-
0036623258
-
An approximately unbiased test of phylogenetic tree selection
-
10.1080/10635150290069913 12079646
-
Shimodaira H An approximately unbiased test of phylogenetic tree selection Syst Biol 2002, 51:492-508. 10.1080/10635150290069913 12079646
-
(2002)
Syst Biol
, vol.51
, pp. 492-508
-
-
Shimodaira, H.1
-
58
-
-
0036139287
-
CONSEL: For assessing the confidence of phylogenetic tree selection
-
10.1093/bioinformatics/17.12.1246 11751242
-
Shimodaira H Hasegawa M CONSEL: For assessing the confidence of phylogenetic tree selection Bioinformatics 2001, 17:1246-1247. 10.1093/ bioinformatics/17.12.1246 11751242
-
(2001)
Bioinformatics
, vol.17
, pp. 1246-1247
-
-
Shimodaira, H.1
Hasegawa, M.2
|