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Volumn 191, Issue 12, 2009, Pages 3881-3891

Microarray identification of Clostridium difficile core components and divergent regions associated with host origin

Author keywords

[No Author keywords available]

Indexed keywords

CELL SURFACE PROTEIN; BACTERIAL PROTEIN;

EID: 67549102416     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00222-09     Document Type: Article
Times cited : (66)

References (49)
  • 1
    • 0033113360 scopus 로고    scopus 로고
    • An outbreak of toxin a negative, toxin B positive Clostridium difficile-associated diarrhea in a Canadian tertiary-care hospital
    • al-Barrak, A., J. Embil, B. Dyck, K. Olekson, D. Nicoll, M. Alfa, and A. Kabani. 1999. An outbreak of toxin A negative, toxin B positive Clostridium difficile-associated diarrhea in a Canadian tertiary-care hospital. Can. Commun. Dis. Rep. 25:65-69.
    • (1999) Can. Commun. Dis. Rep. , vol.25 , pp. 65-69
    • Al-Barrak, A.1    Embil, J.2    Dyck, B.3    Olekson, K.4    Nicoll, D.5    Alfa, M.6    Kabani, A.7
  • 2
    • 0033914385 scopus 로고    scopus 로고
    • Characterization of a toxin A-negative, toxin B-positive strain of Clostridium difficile responsible for a nosocomial outbreak of Clostridium difficile-associated diarrhea
    • Alfa, M. J., A. Kabani, D. Lyerly, S. Moncrief, L. M. Neville, A. Al-Barrak, G. K. Harding, B. Dyck, K. Olekson, and J. M. Embil. 2000. Characterization of a toxin A-negative, toxin B-positive strain of Clostridium difficile responsible for a nosocomial outbreak of Clostridium difficile-associated diarrhea. J. Clin. Microbiol. 38:2706-2714.
    • (2000) J. Clin. Microbiol. , vol.38 , pp. 2706-2714
    • Alfa, M.J.1    Kabani, A.2    Lyerly, D.3    Moncrief, S.4    Neville, L.M.5    Al-Barrak, A.6    Harding, G.K.7    Dyck, B.8    Olekson, K.9    Embil, J.M.10
  • 3
    • 0004225756 scopus 로고    scopus 로고
    • Allen, M. J., and W. M. Yen (ed.). Waveland Press, Long Grove, IL
    • Allen, M. J., and W. M. Yen (ed.). 2002. Introduction to measurement theory. Waveland Press, Long Grove, IL.
    • (2002) Introduction to Measurement Theory
  • 4
    • 15544374402 scopus 로고    scopus 로고
    • PCR ribotyping of Clostridium difficile isolates originating from human and animal sources
    • Arroyo, L. G., S. A. Kruth, B. M. Willey, H. R. Staempfli, D. E. Low, and J. S. Weese. 2005. PCR ribotyping of Clostridium difficile isolates originating from human and animal sources. J. Med. Microbiol. 54:163-166.
    • (2005) J. Med. Microbiol. , vol.54 , pp. 163-166
    • Arroyo, L.G.1    Kruth, S.A.2    Willey, B.M.3    Staempfli, H.R.4    Low, D.E.5    Weese, J.S.6
  • 6
    • 34447094682 scopus 로고    scopus 로고
    • The challenges posed by reemerging Clostridium difficile infection
    • Blossom, D. B., and L. C. McDonald. 2007. The challenges posed by reemerging Clostridium difficile infection. Clin. Infect. Dis. 45:222-227.
    • (2007) Clin. Infect. Dis. , vol.45 , pp. 222-227
    • Blossom, D.B.1    McDonald, L.C.2
  • 7
    • 0024967143 scopus 로고
    • Sleuthing out bacterial identities
    • Bochner, B. R. 1989. Sleuthing out bacterial identities. Nature 339:157-158.
    • (1989) Nature , vol.339 , pp. 157-158
    • Bochner, B.R.1
  • 8
    • 0842312489 scopus 로고    scopus 로고
    • Molecular evolution of hisB genes
    • Brilli, M., and R. Fani. 2004. Molecular evolution of hisB genes. J. Mol. Evol. 58:225-237.
    • (2004) J. Mol. Evol. , vol.58 , pp. 225-237
    • Brilli, M.1    Fani, R.2
  • 10
    • 33845945922 scopus 로고
    • Coefficient alpha and the internal structure of tests
    • Cronbach, L. J. 1951. Coefficient alpha and the internal structure of tests. Psychometrika 16:297-334.
    • (1951) Psychometrika , vol.16 , pp. 297-334
    • Cronbach, L.J.1
  • 11
    • 33846253977 scopus 로고    scopus 로고
    • tcdC genotypes associated with severe TcdC truncation in an epidemic clone and other strains of Clostridium difficile
    • Curry, S. R., J. W. Marsh, C. A. Muto, M. M. O'Leary, A. W. Pasculle, and L. H. Harrison. 2007. tcdC genotypes associated with severe TcdC truncation in an epidemic clone and other strains of Clostridium difficile. J. Clin. Microbiol. 45:215-221.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 215-221
    • Curry, S.R.1    Marsh, J.W.2    Muto, C.A.3    O'Leary, M.M.4    Pasculle, A.W.5    Harrison, L.H.6
  • 12
    • 0021995029 scopus 로고
    • Serogrouping of Clostridium difficile strains by slide agglutination
    • Delmee, M., M. Homel, and G. Wauters. 1985. Serogrouping of Clostridium difficile strains by slide agglutination. J. Clin. Microbiol. 21:323-327.
    • (1985) J. Clin. Microbiol. , vol.21 , pp. 323-327
    • Delmee, M.1    Homel, M.2    Wauters, G.3
  • 14
    • 45249095548 scopus 로고    scopus 로고
    • Clostridium difficile toxin synthesis is negatively regulated by TcdC
    • Dupuy, B., R. Govind, A. Antunes, and S. Matamouros. 2008. Clostridium difficile toxin synthesis is negatively regulated by TcdC. J. Med. Microbiol. 57:685-689.
    • (2008) J. Med. Microbiol. , vol.57 , pp. 685-689
    • Dupuy, B.1    Govind, R.2    Antunes, A.3    Matamouros, S.4
  • 15
    • 33645761368 scopus 로고    scopus 로고
    • Binary toxin-producing, large clostridial toxin-negative Clostridium difficile strains are enterotoxic but do not cause disease in hamsters
    • Geric, B., R. J. Carman, M. Rupnik, C. W. Genheimer, S. P. Sambol, D. M. Lyerly, D. N. Gerding, and S. Johnson. 2006. Binary toxin-producing, large clostridial toxin-negative Clostridium difficile strains are enterotoxic but do not cause disease in hamsters. J. Infect. Dis. 193:1143-1150.
    • (2006) J. Infect. Dis. , vol.193 , pp. 1143-1150
    • Geric, B.1    Carman, R.J.2    Rupnik, M.3    Genheimer, C.W.4    Sambol, S.P.5    Lyerly, D.M.6    Gerding, D.N.7    Johnson, S.8
  • 17
    • 0037190698 scopus 로고    scopus 로고
    • The spectrum of pseudomembranous enterocolitis and antibiotic-associated diarrhea
    • Hurley, B. W., and C. C. Nguyen. 2002. The spectrum of pseudomembranous enterocolitis and antibiotic-associated diarrhea. Arch. Intern. Med. 162:2177-2184.
    • (2002) Arch. Intern. Med. , vol.162 , pp. 2177-2184
    • Hurley, B.W.1    Nguyen, C.C.2
  • 18
    • 0031958706 scopus 로고    scopus 로고
    • Clostridium difficile infection
    • Kelly, C. P., and J. T. LaMont. 1998. Clostridium difficile infection. Annu. Rev. Med. 49:375-390.
    • (1998) Annu. Rev. Med. , vol.49 , pp. 375-390
    • Kelly, C.P.1    LaMont, J.T.2
  • 19
    • 38949178833 scopus 로고    scopus 로고
    • Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: Restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing
    • Killgore, G., A. Thompson, S. Johnson, J. Brazier, E. Kuijper, J. Pepin, E. H. Frost, P. Savelkoul, B. Nicholson, R. J. van den Berg, H. Kato, S. P. Sambol, W. Zukowski, C. Woods, B. Limbago, D. N. Gerding, and L. C. McDonald. 2008. Comparison of seven techniques for typing international epidemic strains of Clostridium difficile: restriction endonuclease analysis, pulsed-field gel electrophoresis, PCR-ribotyping, multilocus sequence typing, multilocus variable-number tandem-repeat analysis, amplified fragment length polymorphism, and surface layer protein A gene sequence typing. J. Clin. Microbiol. 46:431-437.
    • (2008) J. Clin. Microbiol. , vol.46 , pp. 431-437
    • Killgore, G.1    Thompson, A.2    Johnson, S.3    Brazier, J.4    Kuijper, E.5    Pepin, J.6    Frost, E.H.7    Savelkoul, P.8    Nicholson, B.9    Van Den Berg, R.J.10    Kato, H.11    Sambol, S.P.12    Zukowski, W.13    Woods, C.14    Limbago, B.15    Gerding, D.N.16    McDonald, L.C.17
  • 20
    • 0037195198 scopus 로고    scopus 로고
    • Improved analytical methods for microarray-based genome-composition analysis
    • RESEARCH0065
    • Kim, C. C., E. A. Joyce, K. Chan, and S. Falkow. 2002. Improved analytical methods for microarray-based genome-composition analysis. Genome Biol. 3:RESEARCH0065.
    • (2002) Genome Biol. , vol.3
    • Kim, C.C.1    Joyce, E.A.2    Chan, K.3    Falkow, S.4
  • 21
    • 0036135677 scopus 로고    scopus 로고
    • Molecular fingerprinting of Clostridium difficile isolates: Pulsed-field gel electrophoresis versus amplified fragment length polymorphism
    • Klaassen, C. H., H. A. van Haren, and A. M. Horrevorts. 2002. Molecular fingerprinting of Clostridium difficile isolates: pulsed-field gel electrophoresis versus amplified fragment length polymorphism. J. Clin. Microbiol. 40:101-104.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 101-104
    • Klaassen, C.H.1    Van Haren, H.A.2    Horrevorts, A.M.3
  • 23
    • 34548724460 scopus 로고    scopus 로고
    • Distribution and physiology of ABC-type transporters contributing to multidrug resistance in bacteria
    • Lubelski, J., W. N. Konings, and A. J. Driessen. 2007. Distribution and physiology of ABC-type transporters contributing to multidrug resistance in bacteria. Microbiol. Mol. Biol. Rev. 71:463-476.
    • (2007) Microbiol. Mol. Biol. Rev. , vol.71 , pp. 463-476
    • Lubelski, J.1    Konings, W.N.2    Driessen, A.J.3
  • 24
    • 3242795952 scopus 로고    scopus 로고
    • Advances in spotted microarray resources for expression profiling
    • Lyons, P. 2003. Advances in spotted microarray resources for expression profiling. Brief. Funct. Genomic. Proteomic. 2:21-30.
    • (2003) Brief. Funct. Genomic. Proteomic. , vol.2 , pp. 21-30
    • Lyons, P.1
  • 25
    • 33750363448 scopus 로고    scopus 로고
    • Intramembrane-sensing histidine kinases: A new family of cell envelope stress sensors in Firmicutes bacteria
    • Mascher, T. 2006. Intramembrane-sensing histidine kinases: a new family of cell envelope stress sensors in Firmicutes bacteria. FEMS Microbiol. Lett. 264:133-144.
    • (2006) FEMS Microbiol. Lett. , vol.264 , pp. 133-144
    • Mascher, T.1
  • 26
    • 34249782307 scopus 로고    scopus 로고
    • Clostridium difficile toxin expression is inhibited by the novel regulator TcdC
    • Matamouros, S., P. England, and B. Dupuy. 2007. Clostridium difficile toxin expression is inhibited by the novel regulator TcdC. Mol. Microbiol. 64: 1274-1288.
    • (2007) Mol. Microbiol. , vol.64 , pp. 1274-1288
    • Matamouros, S.1    England, P.2    Dupuy, B.3
  • 27
    • 0032584169 scopus 로고    scopus 로고
    • "Black holes" and bacterial pathogenicity: A large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli
    • Maurelli, A. T., R. E. Fernandez, C. A. Bloch, C. K. Rode, and A. Fasano. 1998. "Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli. Proc. Natl. Acad. Sci. USA 95:3943-3948.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 3943-3948
    • Maurelli, A.T.1    Fernandez, R.E.2    Bloch, C.A.3    Rode, C.K.4    Fasano, A.5
  • 29
    • 33644523410 scopus 로고    scopus 로고
    • Clostridium difficile infection in patients discharged from US short-stay hospitals, 1996-2003
    • McDonald, L. C., M. Owings, and D. B. Jernigan. 2006. Clostridium difficile infection in patients discharged from US short-stay hospitals, 1996-2003. Emerg. Infect. Dis. 12:409-415.
    • (2006) Emerg. Infect. Dis. , vol.12 , pp. 409-415
    • McDonald, L.C.1    Owings, M.2    Jernigan, D.B.3
  • 31
    • 0027484742 scopus 로고
    • A molecular characterization of Clostridium difficile isolates from humans, animals and their environments
    • O'Neill, G., J. E. Adams, R. A. Bowman, and T. V. Riley. 1993. A molecular characterization of Clostridium difficile isolates from humans, animals and their environments. Epidemiol. Infect. 111:257-264.
    • (1993) Epidemiol. Infect. , vol.111 , pp. 257-264
    • O'Neill, G.1    Adams, J.E.2    Bowman, R.A.3    Riley, T.V.4
  • 33
    • 0033759220 scopus 로고    scopus 로고
    • Iron metabolism in pathogenic bacteria
    • Ratledge, C., and L. G. Dover. 2000. Iron metabolism in pathogenic bacteria. Annu. Rev. Microbiol. 54:881-941.
    • (2000) Annu. Rev. Microbiol. , vol.54 , pp. 881-941
    • Ratledge, C.1    Dover, L.G.2
  • 34
    • 42149172381 scopus 로고    scopus 로고
    • Heterogeneity of large clostridial toxins: Importance of Clostridium difficile toxinotypes
    • Rupnik, M. 2008. Heterogeneity of large clostridial toxins: importance of Clostridium difficile toxinotypes. FEMS Microbiol. Rev. 32:541-555.
    • (2008) FEMS Microbiol. Rev. , vol.32 , pp. 541-555
    • Rupnik, M.1
  • 35
    • 0031878772 scopus 로고    scopus 로고
    • A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates
    • Rupnik, M., V. Avesani, M. Janc, C. von Eichel-Streiber, and M. Delmee. 1998. A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates. J. Clin. Microbiol. 36:2240-2247.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 2240-2247
    • Rupnik, M.1    Avesani, V.2    Janc, M.3    Von Eichel-Streiber, C.4    Delmee, M.5
  • 37
    • 0038782147 scopus 로고    scopus 로고
    • Transcription and analysis of polymorphism in a cluster of genes encoding surface-associated proteins of Clostridium difficile
    • DOI 10.1128/JB.185.15.4461-4470.2003
    • Savariau-Lacomme, M. P., C. Lebarbier, T. Karjalainen, A. Collignon, and C. Janoir. 2003. Transcription and analysis of polymorphism in a cluster of genes encoding surface-associated proteins of Clostridium difficile. J. Bacteriol. 185:4461-4470. (Pubitemid 36890493)
    • (2003) Journal of Bacteriology , vol.185 , Issue.15 , pp. 4461-4470
    • Savariau-Lacomme, M.-P.1    Lebarbier, C.2    Karjalainen, T.3    Collignon, A.4    Janoir, C.5
  • 39
    • 53549105518 scopus 로고    scopus 로고
    • Microbial Diagnostic Array Workstation (MDAW): A web server for diagnostic array data storage, sharing and analysis
    • Scaria, J., A. Sreedharan, and Y. F. Chang. 2008. Microbial Diagnostic Array Workstation (MDAW): a web server for diagnostic array data storage, sharing and analysis. Source Code Biol. Med. 3:14.
    • (2008) Source Code Biol. Med. , vol.3 , pp. 14
    • Scaria, J.1    Sreedharan, A.2    Chang, Y.F.3
  • 41
    • 33749628473 scopus 로고    scopus 로고
    • Comparative phylogenomics of Clostridium difficile reveals clade specificity and microevolution of hypervirulent strains
    • DOI 10.1128/JB.00664-06
    • Stabler, R. A., D. N. Gerding, J. G. Songer, D. Drudy, J. S. Brazier, H. T. Trinh, A. A. Witney, J. Hinds, and B. W. Wren. 2006. Comparative phylogenomics of Clostridium difficile reveals clade specificity and microevolution of hypervirulent strains. J. Bacteriol. 188:7297-7305. (Pubitemid 44547635)
    • (2006) Journal of Bacteriology , vol.188 , Issue.20 , pp. 7297-7305
    • Stabler, R.A.1    Gerding, D.N.2    Songer, J.G.3    Drudy, D.4    Brazier, J.S.5    Trinh, H.T.6    Witney, A.A.7    Hinds, J.8    Wren, B.W.9
  • 42
    • 0027394158 scopus 로고
    • Escherichia coli K-12 ferrous iron uptake mutants are impaired in their ability to colonize the mouse intestine
    • Stojiljkovic, I., M. Cobeljic, and K. Hantke. 1993. Escherichia coli K-12 ferrous iron uptake mutants are impaired in their ability to colonize the mouse intestine. FEMS Microbiol. Lett. 108:111-115.
    • (1993) FEMS Microbiol. Lett. , vol.108 , pp. 111-115
    • Stojiljkovic, I.1    Cobeljic, M.2    Hantke, K.3
  • 43
    • 0034607782 scopus 로고    scopus 로고
    • Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile
    • Stubbs, S., M. Rupnik, M. Gibert, J. Brazier, B. Duerden, and M. Popoff. 2000. Production of actin-specific ADP-ribosyltransferase (binary toxin) by strains of Clostridium difficile. FEMS Microbiol. Lett. 186:307-312.
    • (2000) FEMS Microbiol. Lett. , vol.186 , pp. 307-312
    • Stubbs, S.1    Rupnik, M.2    Gibert, M.3    Brazier, J.4    Duerden, B.5    Popoff, M.6
  • 44
    • 0031834557 scopus 로고    scopus 로고
    • A gene system for glucitol transport and metabolism in Clostridium beijerinckii NCIMB 8052
    • Tangney, M., J. K. Brehm, N. P. Minton, and W. J. Mitchell. 1998. A gene system for glucitol transport and metabolism in Clostridium beijerinckii NCIMB 8052. Appl. Environ. Microbiol. 64:1612-1619.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 1612-1619
    • Tangney, M.1    Brehm, J.K.2    Minton, N.P.3    Mitchell, W.J.4
  • 46
    • 0035098129 scopus 로고    scopus 로고
    • Molecular characterization of fliD gene encoding flagellar cap and its expression among Clostridium difficile isolates from different serogroups
    • Tasteyre, A., T. Karjalainen, V. Avesani, M. Delmee, A. Collignon, P. Bourlioux, and M. C. Barc. 2001. Molecular characterization of fliD gene encoding flagellar cap and its expression among Clostridium difficile isolates from different serogroups. J. Clin. Microbiol. 39:1178-1183.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 1178-1183
    • Tasteyre, A.1    Karjalainen, T.2    Avesani, V.3    Delmee, M.4    Collignon, A.5    Bourlioux, P.6    Barc, M.C.7
  • 47
    • 0033105190 scopus 로고    scopus 로고
    • Bacterial tellurite resistance
    • DOI 10.1016/S0966-842X(99)01454-7, PII S0966842X99014547
    • Taylor, D. E. 1999. Bacterial tellurite resistance. Trends Microbiol. 7:111-115. (Pubitemid 29271997)
    • (1999) Trends in Microbiology , vol.7 , Issue.3 , pp. 111-115
    • Taylor, D.E.1
  • 48
    • 0030806964 scopus 로고    scopus 로고
    • The kdp system of Clostridium acetobutylicum: Cloning, sequencing, and transcriptional regulation in response to potassium concentration
    • Treuner-Lange, A., A. Kuhn, and P. Durre. 1997. The kdp system of Clostridium acetobutylicum: cloning, sequencing, and transcriptional regulation in response to potassium concentration. J. Bacteriol. 179:4501-4512. (Pubitemid 27299066)
    • (1997) Journal of Bacteriology , vol.179 , Issue.14 , pp. 4501-4512
    • Treuner-Lange, A.1    Kuhn, A.2    Durre, P.3
  • 49
    • 17444366186 scopus 로고    scopus 로고
    • Clostridium difficile toxins: Mechanism of action and role in disease
    • Voth, D. E., and J. D. Ballard. 2005. Clostridium difficile toxins: mechanism of action and role in disease. Clin. Microbiol. Rev. 18:247-263.
    • (2005) Clin. Microbiol. Rev. , vol.18 , pp. 247-263
    • Voth, D.E.1    Ballard, J.D.2


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