-
1
-
-
0029104066
-
The shikimate pathway as an entry to aromatic secondary metabolism. plant
-
Herrmann, K. M. The shikimate pathway as an entry to aromatic secondary metabolism. plant Physiol. 1995, 107, 7.
-
(1995)
Physiol
, vol.107
, pp. 7
-
-
Herrmann, K.M.1
-
2
-
-
0028857259
-
The shikimate pathway: Early steps in the biosynthesis of aromatic compounds. plant
-
Herrmann, K. M. The shikimate pathway: Early steps in the biosynthesis of aromatic compounds. plant Cell 1995, 7, 907.
-
(1995)
Cell
, vol.7
, pp. 907
-
-
Herrmann, K.M.1
-
4
-
-
0028813444
-
Molecular organization of the shikimate pathway in higher plants
-
Schmid, J.; Amrhein, N. Molecular organization of the shikimate pathway in higher plants. Phytochemistrv 1995, 39, 737.
-
(1995)
Phytochemistrv
, vol.39
, pp. 737
-
-
Schmid, J.1
Amrhein, N.2
-
5
-
-
0018932939
-
The herbicide glyphosate is a potent inhibitor of 5-enolpyruvyl-shikimic acid-3-phosphate synthase
-
Steinrücken, H. C.; Amrhein, N. The herbicide glyphosate is a potent inhibitor of 5-enolpyruvyl-shikimic acid-3-phosphate synthase. Biochem. Biophys. Res. Commun. 1980, 94, 1207.
-
(1980)
Biochem. Biophys. Res. Commun
, vol.94
, pp. 1207
-
-
Steinrücken, H.C.1
Amrhein, N.2
-
6
-
-
0032979147
-
The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction
-
Gourley, D. G.; Shrive, A. K.; Polikarpov, I.; Krell, T.; Coggins, J. R.; Hawkins, A. R.; Isaacs, N. W.; Sawyer, L. The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction. Nat. Struct. Biol. 1999, 6, 521.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 521
-
-
Gourley, D.G.1
Shrive, A.K.2
Polikarpov, I.3
Krell, T.4
Coggins, J.R.5
Hawkins, A.R.6
Isaacs, N.W.7
Sawyer, L.8
-
7
-
-
0027237831
-
Evidence for opposite stereochemical courses for the reaction catalysed by type I and type II dehydroquinases
-
Shneier, A.; Harris, J.; Kleanthous, C.; Coggins, J. R.; Hawkins, A. R.; Abell, C. Evidence for opposite stereochemical courses for the reaction catalysed by type I and type II dehydroquinases. Bioorg. Med. Chem. Lett. 1993, 3, 1399.
-
(1993)
Bioorg. Med. Chem. Lett
, vol.3
, pp. 1399
-
-
Shneier, A.1
Harris, J.2
Kleanthous, C.3
Coggins, J.R.4
Hawkins, A.R.5
Abell, C.6
-
8
-
-
0025877807
-
Identification of the active-site lysine residues of two biosyn-thetic 3-dehydroquinases
-
Chaudhuri, S.; Duncan, K.; Graham, L. D.; Coggins, J. R. Identification of the active-site lysine residues of two biosyn-thetic 3-dehydroquinases. Biochem. J. 1991, 275, 1.
-
(1991)
Biochem. J
, vol.275
, pp. 1
-
-
Chaudhuri, S.1
Duncan, K.2
Graham, L.D.3
Coggins, J.R.4
-
9
-
-
0025176821
-
The purification and characterization of 3-dehydroquinase from Streptomyces coelicolor
-
White, P. J.; Young, J.; Hunter, I. S.; Nimmo, H. G.; Coggins, J. R. The purification and characterization of 3-dehydroquinase from Streptomyces coelicolor. Biochem. J. 1990, 265, 735.
-
(1990)
Biochem. J
, vol.265
, pp. 735
-
-
White, P.J.1
Young, J.2
Hunter, I.S.3
Nimmo, H.G.4
Coggins, J.R.5
-
10
-
-
0026792847
-
Inducible overproduction of the Aspergillus nidulans pentafunctional AROM protein and the type-I and -II 3-dehydroquinases from Salmonella typhi and Mycobacterium tuberculosis
-
Moore, J. D.; Lamb, H. K.; Garbe, T.; Servos, S.; Dougan, G.; Charles, I. G.; Hawkins, A. R. Inducible overproduction of the Aspergillus nidulans pentafunctional AROM protein and the type-I and -II 3-dehydroquinases from Salmonella typhi and Mycobacterium tuberculosis. Biochem. J. 1992, 287, 173.
-
(1992)
Biochem. J
, vol.287
, pp. 173
-
-
Moore, J.D.1
Lamb, H.K.2
Garbe, T.3
Servos, S.4
Dougan, G.5
Charles, I.G.6
Hawkins, A.R.7
-
11
-
-
33144478623
-
Crystal structures of Helico-bacter pylori type II dehydroquinase inhibitor complexes: New directions for inhibitor design
-
Robinson, D. A.; Stewart, K. A.; Price, N. C.; Chalk, P. A.; Coggins, J. R.; Lapthorn, A. J. Crystal structures of Helico-bacter pylori type II dehydroquinase inhibitor complexes: New directions for inhibitor design. J. Med. Chem. 2006, 49, 1282.
-
(2006)
J. Med. Chem
, vol.49
, pp. 1282
-
-
Robinson, D.A.1
Stewart, K.A.2
Price, N.C.3
Chalk, P.A.4
Coggins, J.R.5
Lapthorn, A.J.6
-
12
-
-
0026575985
-
A comparison of the enzymological and biophysical properties of two distinct classes of dehydroquinase enzymes
-
Kleanthous, C.; Deka, R.; Davis, K.; Kelly, S. M.; Cooper, A.; Harding, S. E.; Price, N. C.; Hawkins, A. R.; Coggins, J. R. A comparison of the enzymological and biophysical properties of two distinct classes of dehydroquinase enzymes. Biochem. J. 1992, 282, 687.
-
(1992)
Biochem. J
, vol.282
, pp. 687
-
-
Kleanthous, C.1
Deka, R.2
Davis, K.3
Kelly, S.M.4
Cooper, A.5
Harding, S.E.6
Price, N.C.7
Hawkins, A.R.8
Coggins, J.R.9
-
13
-
-
0029824788
-
Evidence from kinetic isotope studies for an enolate intermediate in the mechanism of type II dehydroquinases
-
Harris, J. M.; Gonzalez-Bello, C.; Kleanthous, C.; Hawkins, A. R.; Coggins, J. R.; Abell, C. Evidence from kinetic isotope studies for an enolate intermediate in the mechanism of type II dehydroquinases. Biochem. J. 1996, 319, 333.
-
(1996)
Biochem. J
, vol.319
, pp. 333
-
-
Harris, J.M.1
Gonzalez-Bello, C.2
Kleanthous, C.3
Hawkins, A.R.4
Coggins, J.R.5
Abell, C.6
-
14
-
-
0033557519
-
The folding and assembly of the dodecameric type II dehy-droquinases
-
Price, N. C.; Boam, D. J.; Kelly, S. M.; Duncan, D.; Krell, T.; Gourley, D. G.; Coggins, J. R.; Virden, R.; Hawkins, A. R. The folding and assembly of the dodecameric type II dehy-droquinases. Riochem. J. 1999, 338, 195.
-
(1999)
Riochem. J
, vol.338
, pp. 195
-
-
Price, N.C.1
Boam, D.J.2
Kelly, S.M.3
Duncan, D.4
Krell, T.5
Gourley, D.G.6
Coggins, J.R.7
Virden, R.8
Hawkins, A.R.9
-
15
-
-
7444223453
-
Structural study of the type II 3-dehydroquinate dehydratase from Actinobacillus pleuropneumoniae
-
Maes, D.; Gonzalez-Ramirez, L. A.; Lopez-Jaramillo, J.; Yu, B.; De Bondt, H.; Zegers, I.; Afonina, E.; Garcia-Ruiz, J. M.; Gulnik, S. Structural study of the type II 3-dehydroquinate dehydratase from Actinobacillus pleuropneumoniae. Acta Crystallogr., Sect. D: Biol. Crystallogr. 2004, 60, 463.
-
(2004)
Acta Crystallogr., Sect. D: Biol. Crystallogr
, vol.60
, pp. 463
-
-
Maes, D.1
Gonzalez-Ramirez, L.A.2
Lopez-Jaramillo, J.3
Yu, B.4
De Bondt, H.5
Zegers, I.6
Afonina, E.7
Garcia-Ruiz, J.M.8
Gulnik, S.9
-
16
-
-
0036223042
-
The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor
-
Roszak, A. W.; Robinson, D. A.; Krell, T.; Hunter, I. S.; Fredrickson, M.; Abell, C.; Coggins, J. R.; Lapthorn, A. J. The structure and mechanism of the type II dehydroquinase from Streptomyces coelicolor. Structure 2002, 10, 493.
-
(2002)
Structure
, vol.10
, pp. 493
-
-
Roszak, A.W.1
Robinson, D.A.2
Krell, T.3
Hunter, I.S.4
Fredrickson, M.5
Abell, C.6
Coggins, J.R.7
Lapthorn, A.J.8
-
17
-
-
0033574513
-
Selective inhibition of type II dehydroquinases
-
Frederickson, M.; Parker, E. J.; Hawkins, A. R.; Coggins, J. R.; Abell, C. Selective inhibition of type II dehydroquinases. J. Org. Chem. 1999, 64, 2612.
-
(1999)
J. Org. Chem
, vol.64
, pp. 2612
-
-
Frederickson, M.1
Parker, E.J.2
Hawkins, A.R.3
Coggins, J.R.4
Abell, C.5
-
18
-
-
2942715211
-
-
Frederickson, M.; Roszak, A. W.; Coggins, J. R.; Lapthorn, A. J.; Abell, C. (1R, 4S, 5R)-3-Fluoro-1,4,5-trihydroxy-2-cy-clohexene-1- carboxylic acid: The fluoro analogue of the enolate intermediate in the reaction catalyzed by type II dehydroquinases. Org. Biomol. Chem. 2004, 2, 1592.
-
Frederickson, M.; Roszak, A. W.; Coggins, J. R.; Lapthorn, A. J.; Abell, C. (1R, 4S, 5R)-3-Fluoro-1,4,5-trihydroxy-2-cy-clohexene-1- carboxylic acid: The fluoro analogue of the enolate intermediate in the reaction catalyzed by type II dehydroquinases. Org. Biomol. Chem. 2004, 2, 1592.
-
-
-
-
19
-
-
23844539993
-
-
Kerbarh, O.; Bulloch, E. M.; Payne, R. J.; Sahr, T.; Ré beillé, F.; Abell, C. Mechanistic and inhibition studies of chorismate-utilizing enzymes. Riochem. Soc. Trans. 2005, 33, 763.
-
Kerbarh, O.; Bulloch, E. M.; Payne, R. J.; Sahr, T.; Ré beillé, F.; Abell, C. Mechanistic and inhibition studies of chorismate-utilizing enzymes. Riochem. Soc. Trans. 2005, 33, 763.
-
-
-
-
20
-
-
37349074787
-
Rational design, synthesis, and evaluation of nanomolar type II dehydroquinase inhibitors
-
Payne, R. J.; Peyrot, F.; Kerbarh, O.; Abell, A. D.; Abell, C. Rational design, synthesis, and evaluation of nanomolar type II dehydroquinase inhibitors. Chem Med Chem. 2007, 2, 1015.
-
(2007)
Chem Med Chem
, vol.2
, pp. 1015
-
-
Payne, R.J.1
Peyrot, F.2
Kerbarh, O.3
Abell, A.D.4
Abell, C.5
-
21
-
-
47049104883
-
Nanomolar inhibition of type II dehydroquinase based on the enolate reaction mechanism
-
Toscano, M. D.; Payne, R. J.; Chiba, A.; Kerbarh, O.; Abell, C. Nanomolar inhibition of type II dehydroquinase based on the enolate reaction mechanism. Chem Med Chem. 2007, 2, 101.
-
(2007)
Chem Med Chem
, vol.2
, pp. 101
-
-
Toscano, M.D.1
Payne, R.J.2
Chiba, A.3
Kerbarh, O.4
Abell, C.5
-
22
-
-
0033954256
-
The protein data bank
-
Berman, H. M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T. N.; Weissig, H.; Shindyalov, I. N.; Bourne, P. E. The protein data bank. Nucleic Acids Res. 2000, 28, 235.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
23
-
-
3743152989
-
Calculation of intramolecular force fields from second-derivative tensors
-
Seminario, J. M. Calculation of intramolecular force fields from second-derivative tensors. Int. J. Quantum Chem. 1996, 60, 1271.
-
(1996)
Int. J. Quantum Chem
, vol.60
, pp. 1271
-
-
Seminario, J.M.1
-
24
-
-
33645961739
-
A smooth particle mesh Ewald method
-
Essmann, U.; Perera, L.; Berkowitz, M. L.; Darden, T.; Lee, H.; Pedersen, L. G. A smooth particle mesh Ewald method. J. Chem. Phys. 1995, 103, 8577.
-
(1995)
J. Chem. Phys
, vol.103
, pp. 8577
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
25
-
-
0000189651
-
Density-functional thermochemistry. III. The role of exact exchange
-
Becke, A. D. Density-functional thermochemistry. III. The role of exact exchange. J. Chem,. Phys. 1993, 98, 5648.
-
(1993)
J. Chem,. Phys
, vol.98
, pp. 5648
-
-
Becke, A.D.1
-
26
-
-
0345491105
-
Development of the Colle-Salvetti correlation-energy formula into a functional of the électron density
-
Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti correlation-energy formula into a functional of the électron density. Phys. Rev. B 1988, 37, 785.
-
(1988)
Phys. Rev. B
, vol.37
, pp. 785
-
-
Lee, C.1
Yang, W.2
Parr, R.G.3
-
27
-
-
66749184970
-
-
Frisch, M. J, Trucks, G. W, Schlegel, H. B, Scuseria, G. E, Robb, M. A, Cheeseman, J. R, Montgomery, J. A, Jr, Vreven, T, Kudin, K. N, Burant, J. C, Millam, J. M, Iyengar, S. S, Tomasi, J, Barone, V, Mennucci, B, Cossi, M, Scalmani, G, Rega, N, Petersson, G. A, Nakatsuji, H, Hada, M, Ehara, M, Toyota, K, Fukuda, R, Hasegawa, J, Ishida, M, Nakajima, T, Honda, Y, Kitao, O, Nakai, H, Klene, M, Li, X, Knox, J. E, Hratchian, H. P, Cross, J. B, Bakken, V, Adamo, C, Jaramillo, J, Gomperts, R, Stratmann, R. E, Yazyev, O, Austin, A. J, Cammi, R, Pomelli, C, Ochterski, J. W, Ayala, P. Y, Morokuma, K, Voth, G. A, Salvador, P, Dannenberg, J. J, Zakrzewski, V. G, Dapprich, S, Daniels, A. D, Strain, M. C, Farkas, O, Malick, D. K, Rabuck, A. D, Raghavachari, K, Foresman, J. B, Qrtiz, J. V, Cui, Q, Baboul, A. G, Clifford, S, Cioslowski, J, Stefanov, B. B, Liu, G, Liashenko, A, Piskorz, P, Komaromi, I, Martin, R. L, Fox, D. J, Keit
-
Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Montgomery, J. A., Jr.; Vreven, T.; Kudin, K. N.; Burant, J. C.; Millam, J. M.; Iyengar, S. S.; Tomasi, J.; Barone, V.; Mennucci, B.; Cossi, M.; Scalmani, G.; Rega, N.; Petersson, G. A.; Nakatsuji, H.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Klene, M.; Li, X.; Knox, J. E.; Hratchian, H. P.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Ayala, P. Y.; Morokuma, K.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Zakrzewski, V. G.; Dapprich, S.; Daniels, A. D.; Strain, M. C.; Farkas, O.; Malick, D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Qrtiz, J. V.; Cui, Q.; Baboul, A. G.; Clifford, S.; Cioslowski, J.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi, I.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.; Peng, C. Y.; Nanayakkara, A.; Challacombe, M.; Gill, P. M. W.; Johnson, B.; Chen, W.; Wong, M. W.; Gonzalez, C.; Pople, J. A. Gaussian 03, revision C.02; Gaussian, Inc.: Wallingford, CT, 2004.
-
-
-
-
28
-
-
0031209054
-
A new integral equation formalism for the polarizable continuum model: Theoretical background and applications to isotropic and anisotropic dielectrics
-
Cancès, E.; Mennucci, B.; Tomasi, J. A new integral equation formalism for the polarizable continuum model: Theoretical background and applications to isotropic and anisotropic dielectrics. J. Chem. Phys. 1997, 107, 3032.
-
(1997)
J. Chem. Phys
, vol.107
, pp. 3032
-
-
Cancès, E.1
Mennucci, B.2
Tomasi, J.3
-
29
-
-
0032502372
-
Ab initio study of ionic solutions by a polarizable continuum dielectric model
-
Cossi, M.; Barone, V.; Mennucci, B.; Tomasi, J. Ab initio study of ionic solutions by a polarizable continuum dielectric model. Chem,. Phys. Lett. 1998, 286, 253.
-
(1998)
Chem,. Phys. Lett
, vol.286
, pp. 253
-
-
Cossi, M.1
Barone, V.2
Mennucci, B.3
Tomasi, J.4
-
30
-
-
84961979198
-
Continuum solvation models: A new approach to the problem of soluté's charge distribution and cavity boundaries
-
Mennucci, B.; Tomasi, J. Continuum solvation models: A new approach to the problem of soluté's charge distribution and cavity boundaries. J. Chem. Phys. 1997, 106, 5151.
-
(1997)
J. Chem. Phys
, vol.106
, pp. 5151
-
-
Mennucci, B.1
Tomasi, J.2
-
31
-
-
84961976154
-
Modeling électron transfer in biochemistry: A quantum chemical study of charge séparation in Rhodobacter sphaeroi-des and photosystem II
-
Blomberg, M. R. A.; Siegbahn, P. E. M.; Babcock, G. T. Modeling électron transfer in biochemistry: A quantum chemical study of charge séparation in Rhodobacter sphaeroi-des and photosystem II J. Am. Chem. Soc. 1998, 120, 8812.
-
(1998)
J. Am. Chem. Soc
, vol.120
, pp. 8812
-
-
Blomberg, M.R.A.1
Siegbahn, P.E.M.2
Babcock, G.T.3
-
32
-
-
0001213712
-
Assessment of Gaussian-3 and density functional theories for a larger experimental test set
-
Curtiss, L. A.; Raghavachari, K.; Redfern, P. C.; Pople, J. A. Assessment of Gaussian-3 and density functional theories for a larger experimental test set. J. Chem. Phys. 2000, 112, 7374.
-
(2000)
J. Chem. Phys
, vol.112
, pp. 7374
-
-
Curtiss, L.A.1
Raghavachari, K.2
Redfern, P.C.3
Pople, J.A.4
-
34
-
-
5244245983
-
A correlation of reaction rates
-
Hammond, G. S. A correlation of reaction rates. J. Am. Chem. Soc. 1955, 77, 334.
-
(1955)
J. Am. Chem. Soc
, vol.77
, pp. 334
-
-
Hammond, G.S.1
-
35
-
-
0000288714
-
Parameters for the description of transition states
-
Leffler, J. E. Parameters for the description of transition states. Science 1953, 117, 340.
-
(1953)
Science
, vol.117
, pp. 340
-
-
Leffler, J.E.1
-
36
-
-
0029769521
-
Localization of the active site of type II dehydroquinases. Identification of a common arginine-containing motif in the two classes of dehydroquinases
-
Krell, T.; Horsburgh, M. J.; Cooper, A.; Kelly, S. M.; Coggins, J. R. Localization of the active site of type II dehydroquinases. Identification of a common arginine-containing motif in the two classes of dehydroquinases. J. Biol. Chem. 1996, 271, 24492.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 24492
-
-
Krell, T.1
Horsburgh, M.J.2
Cooper, A.3
Kelly, S.M.4
Coggins, J.R.5
-
37
-
-
66749161164
-
-
Case, D. A.; Darden, T. A.; Cheatham, T. E., III; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Merz, K. M.; Pearlman, D. A.; Crowley, M.; Walker, R. C.; Zhang, W.; Wang, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Wong, K. F.; Paesani, F.; Brozell, S.; Tsui, V.; Gohlke, H.; Yang, L.; Tan, C.; Mongan, J.; Hornak, V.; Cui, G.; Beroza, P.; Mathews, D. H.; Schafmeister, C.; Ross, W. S.; Kollman, P. A. AMBER9 University of California, San Francisco, 2006.
-
Case, D. A.; Darden, T. A.; Cheatham, T. E., III; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Merz, K. M.; Pearlman, D. A.; Crowley, M.; Walker, R. C.; Zhang, W.; Wang, B.; Hayik, S.; Roitberg, A.; Seabra, G.; Wong, K. F.; Paesani, F.; Brozell, S.; Tsui, V.; Gohlke, H.; Yang, L.; Tan, C.; Mongan, J.; Hornak, V.; Cui, G.; Beroza, P.; Mathews, D. H.; Schafmeister, C.; Ross, W. S.; Kollman, P. A. AMBER9 University of California, San Francisco, 2006.
-
-
-
-
38
-
-
77955549204
-
Scalable molecular dynamics with NAMD
-
Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kale, L.; Schulten, K. Scalable molecular dynamics with NAMD. J. Comput. Chem. 2005, 1781, 26.
-
(2005)
J. Comput. Chem
, vol.1781
, pp. 26
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
|