-
1
-
-
0034120945
-
The role of b cells and autoantibodies in multiple sclerosis
-
Archelos,J. et al. (2000) The role of b cells and autoantibodies in multiple sclerosis. Ann. Neurol., 47, 694-706.
-
(2000)
Ann. Neurol
, vol.47
, pp. 694-706
-
-
Archelos, J.1
-
3
-
-
20044373640
-
Transcription-based prediction of response to ifnbeta using supervised computational methods
-
Baranzini,S.E. et al. (2005) Transcription-based prediction of response to ifnbeta using supervised computational methods. PLoS Biol 3, e2.
-
(2005)
PLoS Biol
, vol.3
-
-
Baranzini, S.E.1
-
4
-
-
2942534529
-
Active semi-supervision for pairwise constrained clustering
-
Lake Buena Vista, Florida, USA, pp
-
Basu,S. et al. (2004) Active semi-supervision for pairwise constrained clustering. In Proceedings of the 2004 SIAM International Conference on Data Mining (SDM-04), Lake Buena Vista, Florida, USA, pp. 333-344.
-
(2004)
Proceedings of the 2004 SIAM International Conference on Data Mining (SDM-04)
, pp. 333-344
-
-
Basu, S.1
-
5
-
-
0003857778
-
A gentle tutorial of the em algorithm and its application to parameter estimation for gaussian mixture and hidden markov models
-
Technical Report TR-97-021. International Computer Science Institute, Berkeley
-
Bilmes,J. (1998) A gentle tutorial of the em algorithm and its application to parameter estimation for gaussian mixture and hidden markov models. Technical Report TR-97-021. International Computer Science Institute, Berkeley.
-
(1998)
-
-
Bilmes, J.1
-
6
-
-
36249003318
-
Class prediction from time series gene expression profiles using dynamical systems kernel
-
Borgwardt,K.M. et al. (2006) Class prediction from time series gene expression profiles using dynamical systems kernel. Pac. Symp. Biocomput., 11, 547-558.
-
(2006)
Pac. Symp. Biocomput
, vol.11
, pp. 547-558
-
-
Borgwardt, K.M.1
-
7
-
-
1642529511
-
Metagenes and molecular pattern discovery using matrix factorization
-
Brunet,J.-P. et al. (2004) Metagenes and molecular pattern discovery using matrix factorization. Proc. Natl Acad. Sci. USA, 101, 4164-4169.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 4164-4169
-
-
Brunet, J.-P.1
-
8
-
-
0029195475
-
On the exponential value of labeled samples
-
Castelli,V. and Cover,T.M. (1994) On the exponential value of labeled samples. Patt. Recog. Lett., 16, 105-111.
-
(1994)
Patt. Recog. Lett
, vol.16
, pp. 105-111
-
-
Castelli, V.1
Cover, T.M.2
-
9
-
-
33749252873
-
-
Chapelle,O. et al, eds, MIT Press, Cambridge, MA
-
Chapelle,O. et al. (eds) (2006) Semi-supervised Learning. MIT Press, Cambridge, MA.
-
(2006)
Semi-supervised Learning
-
-
-
10
-
-
42149156031
-
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
-
Costa,I.G. et al. (2007) Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data. BMC Bioinformatics, 8, S3.
-
(2007)
BMC Bioinformatics
, vol.8
-
-
Costa, I.G.1
-
11
-
-
0032441150
-
Cluster analysis and display of genome-wide expression patterns
-
Eisen,M. et al. (1998) Cluster analysis and display of genome-wide expression patterns. Proc. Natl Acad. Sci. USA, 95, 14863-14868.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 14863-14868
-
-
Eisen, M.1
-
12
-
-
28644452470
-
Clustering short time series gene expression data
-
Ernst,J. et al. (2005) Clustering short time series gene expression data. Bioinformatics, 21, i159-i168.
-
(2005)
Bioinformatics
, vol.21
-
-
Ernst, J.1
-
13
-
-
0032269108
-
How many clusters? which clustering method? answers via model-based cluster analysis
-
Fraley,C. and Raftery,A.E. (1998) How many clusters? which clustering method? answers via model-based cluster analysis. Comput. J., 41, 578-588.
-
(1998)
Comput. J
, vol.41
, pp. 578-588
-
-
Fraley, C.1
Raftery, A.E.2
-
15
-
-
18244384210
-
Multiple-laboratory comparison of microarray platforms
-
Irizarry,R.A. et al. (2005) Multiple-laboratory comparison of microarray platforms. Nat. Methods, 2, 345-350.
-
(2005)
Nat. Methods
, vol.2
, pp. 345-350
-
-
Irizarry, R.A.1
-
16
-
-
34248363540
-
A patient-gene model for temporal expression profiles in clinical studies
-
Kaminski,N. and Bar-Joseph,Z. (2007) A patient-gene model for temporal expression profiles in clinical studies. J. Computat. Biol., 14 324-338.
-
(2007)
J. Computat. Biol
, vol.14
, pp. 324-338
-
-
Kaminski, N.1
Bar-Joseph, Z.2
-
17
-
-
33745162259
-
Learning with constrained and unlabelled data
-
San Diego, CA, USA, pp
-
Lange,T. et al. (2005) Learning with constrained and unlabelled data. In Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. Vol. 1, San Diego, CA, USA, pp. 731-738.
-
(2005)
Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
, vol.1
, pp. 731-738
-
-
Lange, T.1
-
18
-
-
46249094886
-
Alignment and classification of time series gene expression in clinical studies
-
Lin,T.H. et al. (2008) Alignment and classification of time series gene expression in clinical studies. Bioinformatics, 24, i147-i155.
-
(2008)
Bioinformatics
, vol.24
-
-
Lin, T.H.1
-
19
-
-
84934442362
-
Computational diagnostics with gene expression profiles
-
Lottaz,C. et al. (2008) Computational diagnostics with gene expression profiles. Meth. Mol. Biol., 453, 281-296.
-
(2008)
Meth. Mol. Biol
, vol.453
, pp. 281-296
-
-
Lottaz, C.1
-
20
-
-
84898984833
-
Semi-supervised learning with penalized probabilistic clustering
-
Saul,L.K. et al, eds, MIT Press, Cambridge, MA, USA, pp
-
Lu,Z. and Leen,T. (2005) Semi-supervised learning with penalized probabilistic clustering. In Saul,L.K. et al. (eds), Advances in Neural Information Processing Systems 17. MIT Press, Cambridge, MA, USA, pp. 849-856.
-
(2005)
Advances in Neural Information Processing Systems 17
, pp. 849-856
-
-
Lu, Z.1
Leen, T.2
-
21
-
-
0004066260
-
Finite Mixture Models
-
Wiley, Hoboken, NJ, USA
-
MacLachlan,G. and Peel,D. (2000) Finite Mixture Models. In Wiley Series in Probability and Statistics. Wiley, Hoboken, NJ, USA.
-
(2000)
Wiley Series in Probability and Statistics
-
-
MacLachlan, G.1
Peel, D.2
-
22
-
-
0038724494
-
Consensus clustering: A resampling-based method for class discovery and visualization of gene expression microarray data
-
Monti,S. et al. (2003) Consensus clustering: A resampling-based method for class discovery and visualization of gene expression microarray data. Mach. Learn., 52, 91-118.
-
(2003)
Mach. Learn
, vol.52
, pp. 91-118
-
-
Monti, S.1
-
23
-
-
0033010373
-
The il-4 receptor: Signaling mechanisms and biologic functions
-
Nelms,K. et al. (1999) The il-4 receptor: Signaling mechanisms and biologic functions. Annu. Rev. Immunol., 17, 701-738.
-
(1999)
Annu. Rev. Immunol
, vol.17
, pp. 701-738
-
-
Nelms, K.1
-
24
-
-
0003309997
-
Text classification from labeled and unlabeled documents using EM
-
Nigam,K. et al. (1999) Text classification from labeled and unlabeled documents using EM. Mach. Learn., 39, 795-801.
-
(1999)
Mach. Learn
, vol.39
, pp. 795-801
-
-
Nigam, K.1
-
25
-
-
34547571030
-
g:pRofiler-a web-based toolset for functional profiling of gene lists from large-scale experiments
-
Reimand,J. et al. (2007) g:pRofiler-a web-based toolset for functional profiling of gene lists from large-scale experiments. Nucleic Acids Res., 35, W193-W200.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Reimand, J.1
-
26
-
-
0036789860
-
Assessment of different treatment failure criteria in a cohort of relapsing-remitting multiple sclerosis patients treated with interferon beta: Implications for clinical trials
-
Ro,J. et al. (2002) Assessment of different treatment failure criteria in a cohort of relapsing-remitting multiple sclerosis patients treated with interferon beta: Implications for clinical trials. Ann. Neurol., 52, 400-406.
-
(2002)
Ann. Neurol
, vol.52
, pp. 400-406
-
-
Ro, J.1
-
27
-
-
33646107167
-
T cell gene expression profiling identifies distinct subgroups of japanese multiple sclerosis patients
-
Satoh,J.I. et al. (2006) T cell gene expression profiling identifies distinct subgroups of japanese multiple sclerosis patients. J. Neuroimmunol., 174, 108-118.
-
(2006)
J. Neuroimmunol
, vol.174
, pp. 108-118
-
-
Satoh, J.I.1
-
28
-
-
4944252468
-
Using hidden Markov models to analyze gene expression time course data
-
Schliep,A. et al. (2003) Using hidden Markov models to analyze gene expression time course data. Bioinformatics, 19(Suppl. 1) 255-263.
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 1
, pp. 255-263
-
-
Schliep, A.1
-
29
-
-
19544393245
-
Robust inference of groups in gene expression time-courses using mixtures of HMMs
-
Schliep,A. et al. (2004) Robust inference of groups in gene expression time-courses using mixtures of HMMs. Bioinformatics, 20(Suppl. 1), 283-289.
-
(2004)
Bioinformatics
, vol.20
, Issue.SUPPL. 1
, pp. 283-289
-
-
Schliep, A.1
-
32
-
-
15944365840
-
Diagnostic signatures from microarrays: A bioinformatics concept for personalized medicine
-
Spang,R. (2003) Diagnostic signatures from microarrays: A bioinformatics concept for personalized medicine. BIOSILICO, 1, 64-68.
-
(2003)
BIOSILICO
, vol.1
, pp. 64-68
-
-
Spang, R.1
-
33
-
-
33748295732
-
A subtype of multiple sclerosis defined by an activated immune defense program
-
van Baarsen,L.G.M. et al. (2006) A subtype of multiple sclerosis defined by an activated immune defense program. Genes Immun., 7 522-531.
-
(2006)
Genes Immun
, vol.7
, pp. 522-531
-
-
van Baarsen, L.G.M.1
-
34
-
-
41649114164
-
Enabling personalized cancer medicine through analysis of gene-expression patterns
-
van't Veer,L.J. and Bernards,R. (2008) Enabling personalized cancer medicine through analysis of gene-expression patterns. Nature, 452, 564-570.
-
(2008)
Nature
, vol.452
, pp. 564-570
-
-
van't Veer, L.J.1
Bernards, R.2
-
35
-
-
21844476447
-
Interferon alpha activates nf-kappab in jak1-deficient cells through a tyk2-dependent pathway
-
Yang,C.H. et al. (2005) Interferon alpha activates nf-kappab in jak1-deficient cells through a tyk2-dependent pathway. J. Biol. Chem. 280, 25849-25853.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 25849-25853
-
-
Yang, C.H.1
|