Novel two-dimensional DNA gel electrophoresis mapping for characterizing complex bacterial communities in environmental samples

Journal of Bioscience and Bioengineering

Volumn 107, Issue 6, 2009, Pages 646-651

  Liu, Guo hua ^a   Harada, Toshiyuki ^a   Amemiya, Takashi ^a   Itoh, Kiminori ^a  

^a YOKOHAMA NATIONAL UNIVERSITY   (Japan)

Author keywords

16S rDNA; Bacterial community; Cluster analysis; Environmental sample; Novel 2 DGE mapping

Indexed keywords

16S RDNA; AMPLICONS; BACTERIAL COMMUNITY; CHAIN-LENGTH; CLUSTERING ANALYSIS; COMPLEX ENVIRONMENTAL SYSTEMS; DENATURING GRADIENT GEL ELECTROPHORESIS; DENATURING GRADIENT GELS; DNA FRAGMENTS; DNA SEPARATIONS; ENVIRONMENTAL SAMPLE; GEL ELECTROPHORESIS; GENOMIC DNAS; HIGH RESOLUTIONS; MAPPING TECHNIQUES; NOVEL 2-DGE MAPPING; POLYMERASE CHAIN REACTIONS; POTENTIAL APPLICATIONS; SINGLE-STRAND CONFORMATION POLYMORPHISMS; TEMPORAL TEMPERATURE GRADIENT GEL ELECTROPHORESIS; TWO DIMENSIONAL GEL ELECTROPHORESES (2 DGE);

AMPLIFICATION; BACTERIOLOGY; CLUSTER ANALYSIS; DNA; ELECTROPHORESIS; GELATION; GELS; GENES; NUCLEIC ACIDS; POLYMORPHISM; TWO DIMENSIONAL;

DNA SEQUENCES;

DNA 16S; DNA FRAGMENT;

AMPLICON; ARTICLE; BACTERIAL CELL; CHAIN LENGTH POLYMORPHISM ANALYSIS; CLUSTER ANALYSIS; DNA FINGERPRINTING; DNA POLYMORPHISM; GEL ELECTROPHORESIS; JAPAN; MICROBIAL COMMUNITY; NONHUMAN; POLYMERASE CHAIN REACTION; SINGLE STRAND CONFORMATION POLYMORPHISM; SOIL ANALYSIS; TWO DIMENSIONAL GEL ELECTROPHORESIS; WATER SAMPLING;

DNA, BACTERIAL; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; POLYMORPHISM, GENETIC; SOIL MICROBIOLOGY; WATER MICROBIOLOGY;

BACTERIA (MICROORGANISMS);

EID: 65549162058     PISSN: 13891723     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiosc.2009.02.002     Document Type: Article

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