-
1
-
-
10644222646
-
The histone chaperone Asf1p mediates global chromatin disassembly in vivo
-
Adkins, M. W., and Tyler, J. K. (2004). The histone chaperone Asf1p mediates global chromatin disassembly in vivo. J. Biol. Chem. 279, 52069-52074.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 52069-52074
-
-
Adkins, M.W.1
Tyler, J.K.2
-
2
-
-
0004270170
-
-
New York: Wiley-Interscience
-
Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Smith, J. A., Seidman, J. G., and Struhl, K. (2000). Current Protocols in Molecular Biology, New York: Wiley-Interscience.
-
(2000)
Current Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Smith, J.A.5
Seidman, J.G.6
Struhl, K.7
-
3
-
-
0035504409
-
Quantitative amplification of single-stranded DNA (QAOS) demonstrates that cdc13-1 mutants generate ssDNA in a telomere to centromere direction
-
Booth, C., Griffith, E., Brady, G., and Lydall, D. (2001). Quantitative amplification of single-stranded DNA (QAOS) demonstrates that cdc13-1 mutants generate ssDNA in a telomere to centromere direction. Nucleic Acids Res. 29, 4414-4422.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4414-4422
-
-
Booth, C.1
Griffith, E.2
Brady, G.3
Lydall, D.4
-
4
-
-
0000560681
-
Circular DNA plasmids of yeasts
-
ed. J. R. Broach, E. W. Jones, and J. R. Pringle, Plainview, NY: Cold Spring Harbor Press
-
Broach, J. R., and Volkert, F. C. (1991). Circular DNA plasmids of yeasts. In: The Molecular and Cellular Biology of the Yeast Saccharomyces, Vol. 1, ed. J. R. Broach, E. W. Jones, and J. R. Pringle, Plainview, NY: Cold Spring Harbor Press, 297-331.
-
(1991)
The Molecular and Cellular Biology of the Yeast Saccharomyces
, vol.1
, pp. 297-331
-
-
Broach, J.R.1
Volkert, F.C.2
-
5
-
-
34548213631
-
The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination
-
Burgess, R. C., Rahman, S., Lisby, M., Rothstein, R., and Zhao, X. (2007). The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination. Mol. Cell. Biol. 27, 6153-6162.
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 6153-6162
-
-
Burgess, R.C.1
Rahman, S.2
Lisby, M.3
Rothstein, R.4
Zhao, X.5
-
6
-
-
18144362883
-
Misregulation of 2 μm circle copy number in a SUMO pathway mutant
-
Chen, X. L., Reindle, A., and Johnson, E. S. (2005). Misregulation of 2 μm circle copy number in a SUMO pathway mutant. Mol. Cell. Biol. 25, 4311-4320.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4311-4320
-
-
Chen, X.L.1
Reindle, A.2
Johnson, E.S.3
-
7
-
-
35048872745
-
Topoisomerase I-dependent viability loss in Saccharomyces cerevi- siae mutants defective in both SUMO conjugation and DNA repair
-
Chen, X. L., Silver, H. R., Xiong, L., Belichenko, I., Adegite, C., and Johnson, E. S. (2007). Topoisomerase I-dependent viability loss in Saccharomyces cerevi- siae mutants defective in both SUMO conjugation and DNA repair. Genetics 177, 17-30.
-
(2007)
Genetics
, vol.177
, pp. 17-30
-
-
Chen, X.L.1
Silver, H.R.2
Xiong, L.3
Belichenko, I.4
Adegite, C.5
Johnson, E.S.6
-
8
-
-
0027250337
-
The rRNA-encoding DNA array has an altered structure in topoisom- erase I mutants of Saccharomyces cerevisiae
-
Christman, M. F., Dietrich, F. S., Levin, N. A., Sadoff, B. U., and Fink, G. R. (1993). The rRNA-encoding DNA array has an altered structure in topoisom- erase I mutants of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA 90, 7637-7641.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 7637-7641
-
-
Christman, M.F.1
Dietrich, F.S.2
Levin, N.A.3
Sadoff, B.U.4
Fink, G.R.5
-
9
-
-
18144426798
-
The 2 μm plasmid causes cell death in Saccharomyces cerevisiae with a mutation in Ulp1 protease
-
Dobson, M. J., Pickett, A. J., Velmurugan, S., Pinder, J. B., Barrett, L. A., Jayaram, M., and Chew, J. S. (2005). The 2 μm plasmid causes cell death in Saccharomyces cerevisiae with a mutation in Ulp1 protease. Mol. Cell. Biol. 25, 4299-4310.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4299-4310
-
-
Dobson, M.J.1
Pickett, A.J.2
Velmurugan, S.3
Pinder, J.B.4
Barrett, L.A.5
Jayaram, M.6
Chew, J.S.7
-
10
-
-
0022596135
-
Copy number amplification of the 2 micron circle plasmid of Saccharomyces cerevisiae
-
Futcher, A. B. (1986). Copy number amplification of the 2 micron circle plasmid of Saccharomyces cerevisiae. J. Theor. Biol. 119, 197-204.
-
(1986)
J. Theor. Biol
, vol.119
, pp. 197-204
-
-
Futcher, A.B.1
-
12
-
-
0032589787
-
The integrase family of recombinase: Organization and function of the active site
-
Grainge, I., and Jayaram, M. (1999). The integrase family of recombinase: organization and function of the active site. Mol. Microbiol. 33, 449 -456.
-
(1999)
Mol. Microbiol
, vol.33
, pp. 449-456
-
-
Grainge, I.1
Jayaram, M.2
-
13
-
-
33751419716
-
Surviving the breakup: The DNA damage checkpoint
-
Harrison, J. C., and Haber, J. E. (2006). Surviving the breakup: the DNA damage checkpoint. Annu. Rev. Genet. 40, 209-235.
-
(2006)
Annu. Rev. Genet
, vol.40
, pp. 209-235
-
-
Harrison, J.C.1
Haber, J.E.2
-
14
-
-
15944406765
-
SUMO: A history of modification
-
Hay, R. T. (2005). SUMO: a history of modification. Mol. Cell 18, 1-12.
-
(2005)
Mol. Cell
, vol.18
, pp. 1-12
-
-
Hay, R.T.1
-
15
-
-
0025821897
-
A group of interacting yeast DNA replication genes
-
Hennessy, K. M., Lee, A., Chen, E., and Botstein, D. (1991). A group of interacting yeast DNA replication genes. Genes Dev. 5, 958 -969.
-
(1991)
Genes Dev
, vol.5
, pp. 958-969
-
-
Hennessy, K.M.1
Lee, A.2
Chen, E.3
Botstein, D.4
-
16
-
-
0023481280
-
A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Esche- richia coli
-
Hoffman, C. S., and Winston, F. (1987). A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Esche- richia coli. Gene 57, 267-272.
-
(1987)
Gene
, vol.57
, pp. 267-272
-
-
Hoffman, C.S.1
Winston, F.2
-
17
-
-
0022569859
-
A rapid, efficient method for isolating DNA from yeast
-
Holm, C., Meeks-Wagner, D. W., Fangman, W. L., and Botstein, D. (1986). A rapid, efficient method for isolating DNA from yeast. Gene 42, 169-173.
-
(1986)
Gene
, vol.42
, pp. 169-173
-
-
Holm, C.1
Meeks-Wagner, D.W.2
Fangman, W.L.3
Botstein, D.4
-
18
-
-
37249076354
-
The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity
-
Ii, T., Fung, J., Mullen, J. R., and Brill, S. J. (2007a). The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity. Cell Cycle 6, 2800 -2809.
-
(2007)
Cell Cycle
, vol.6
, pp. 2800-2809
-
-
Ii, T.1
Fung, J.2
Mullen, J.R.3
Brill, S.J.4
-
19
-
-
35348982302
-
Stimulation of in vitro sumoylation by Slx5-Slx8, evidence for a functional interaction with the SUMO pathway
-
Ii, T., Mullen, J. R., Slagle, C. E., and Brill, S. J. (2007b). Stimulation of in vitro sumoylation by Slx5-Slx8, evidence for a functional interaction with the SUMO pathway. DNA Repair 6, 1679-1691.
-
(2007)
DNA Repair
, vol.6
, pp. 1679-1691
-
-
Ii, T.1
Mullen, J.R.2
Slagle, C.E.3
Brill, S.J.4
-
20
-
-
4143105544
-
Site-specific recombination and partitioning systems in the stable high copy propagation of the 2-micron yeast plasmid
-
Jayaram, M., Mehta, S., Uzri, D., Voziyanov, Y., and Velmurugan, S. (2004). Site-specific recombination and partitioning systems in the stable high copy propagation of the 2-micron yeast plasmid. Prog. Nucleic Acid. Res. Mol. Biol. 77, 127-172.
-
(2004)
Prog. Nucleic Acid. Res. Mol. Biol
, vol.77
, pp. 127-172
-
-
Jayaram, M.1
Mehta, S.2
Uzri, D.3
Voziyanov, Y.4
Velmurugan, S.5
-
21
-
-
3943099375
-
Protein modification by SUMO
-
Johnson, E. S. (2004). Protein modification by SUMO. Annu. Rev. Biochem. 73, 355-382.
-
(2004)
Annu. Rev. Biochem
, vol.73
, pp. 355-382
-
-
Johnson, E.S.1
-
22
-
-
0033615965
-
Cell cycle-regulated attachment of the ubiquitin-related protein SUMO to the yeast septins
-
Johnson, E. S., and Blobel, G. (1999). Cell cycle-regulated attachment of the ubiquitin-related protein SUMO to the yeast septins. J. Cell Biol. 147, 981-994.
-
(1999)
J. Cell Biol
, vol.147
, pp. 981-994
-
-
Johnson, E.S.1
Blobel, G.2
-
23
-
-
34447509295
-
Antitumour drugs impede DNA uncoiling by topoisomerase I
-
Koster, D. A., Palle, K., Bot, E. S., Bjornsti, M. A., and Dekker, N. H. (2007). Antitumour drugs impede DNA uncoiling by topoisomerase I. Nature 448, 213-217.
-
(2007)
Nature
, vol.448
, pp. 213-217
-
-
Koster, D.A.1
Palle, K.2
Bot, E.S.3
Bjornsti, M.A.4
Dekker, N.H.5
-
24
-
-
10344263324
-
Recombination proteins in yeast
-
Krogh, B. O., and Symington, L. S. (2004). Recombination proteins in yeast. Annu. Rev. Genet. 38, 233-271.
-
(2004)
Annu. Rev. Genet
, vol.38
, pp. 233-271
-
-
Krogh, B.O.1
Symington, L.S.2
-
25
-
-
34548318654
-
A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillance
-
Lewis, A., Felberbaum, R., and Hochstrasser, M. (2007). A nuclear envelope protein linking nuclear pore basket assembly, SUMO protease regulation, and mRNA surveillance. J. Cell Biol. 178, 813-827.
-
(2007)
J. Cell Biol
, vol.178
, pp. 813-827
-
-
Lewis, A.1
Felberbaum, R.2
Hochstrasser, M.3
-
26
-
-
0035029153
-
Tumor cell death induced by topoisomerase- targeting drugs
-
Li, T. K., and Liu, L. F. (2001). Tumor cell death induced by topoisomerase- targeting drugs. Annu. Rev. Pharmacol. Toxicol. 41, 53-77.
-
(2001)
Annu. Rev. Pharmacol. Toxicol
, vol.41
, pp. 53-77
-
-
Li, T.K.1
Liu, L.F.2
-
27
-
-
42449130956
-
Break-induced replication: What is it and what is it for?
-
Llorente, B., Smith, C. E., and Symington, L. S. (2008). Break-induced replication: what is it and what is it for? Cell Cycle 7, 859-864.
-
(2008)
Cell Cycle
, vol.7
, pp. 859-864
-
-
Llorente, B.1
Smith, C.E.2
Symington, L.S.3
-
28
-
-
34547927220
-
Break-induced replication and telomerase-independent telomere maintenance require Pol32
-
Lydeard, J. R., Jain, S., Yamaguchi, M., and Haber, J. E. (2007). Break-induced replication and telomerase-independent telomere maintenance require Pol32. Nature 448, 820-823.
-
(2007)
Nature
, vol.448
, pp. 820-823
-
-
Lydeard, J.R.1
Jain, S.2
Yamaguchi, M.3
Haber, J.E.4
-
29
-
-
41949120904
-
Apn1 and Apn2 endo- nucleases prevent accumulation of repair-associated DNA breaks in budding yeast as revealed by direct chromosomal analysis
-
Ma, W., Resnick, M. A., and Gordenin, D. A. (2008). Apn1 and Apn2 endo- nucleases prevent accumulation of repair-associated DNA breaks in budding yeast as revealed by direct chromosomal analysis. Nucleic Acids Res. 36, 1836-1846.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 1836-1846
-
-
Ma, W.1
Resnick, M.A.2
Gordenin, D.A.3
-
30
-
-
33745474120
-
Break-induced replication and recom- binational telomere elongation in yeast
-
McEachern, M. J., and Haber, J. E. (2006). Break-induced replication and recom- binational telomere elongation in yeast. Annu. Rev. Biochem. 5, 111-135.
-
(2006)
Annu. Rev. Biochem
, vol.5
, pp. 111-135
-
-
McEachern, M.J.1
Haber, J.E.2
-
31
-
-
0028586017
-
Regulatable promoters of Saccharomyces cerevisiae: Comparison of transcriptional activity and their use for heterologous expression
-
Mumberg, D., Muller, R., and Funk, M. (1994). Regulatable promoters of Saccharomyces cerevisiae: comparison of transcriptional activity and their use for heterologous expression. Nucleic Acids Res. 22, 5767-5768.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 5767-5768
-
-
Mumberg, D.1
Muller, R.2
Funk, M.3
-
32
-
-
0023661340
-
Antagonistic controls regulate copy number of the yeast 2 mu plasmid
-
Murray, J. A., Scarpa, M., Rossi, N., and Cesareni, G. (1987). Antagonistic controls regulate copy number of the yeast 2 mu plasmid. EMBO J. 6, 4205-4212.
-
(1987)
EMBO J
, vol.6
, pp. 4205-4212
-
-
Murray, J.A.1
Scarpa, M.2
Rossi, N.3
Cesareni, G.4
-
33
-
-
54949093203
-
Functional targeting of DNA damage to a nuclear pore-associated SUMO- dependent ubiquitin ligase
-
Nagai, S., Dubrana, K., Tsai-Pflugfelder, M., Davidson, M. B., Roberts, T. M., Brown, G. W., Varela, E., Hediger, F., Gasser, S. M., and Krogan, N. J. (2008). Functional targeting of DNA damage to a nuclear pore-associated SUMO- dependent ubiquitin ligase. Science 322, 597-602.
-
(2008)
Science
, vol.322
, pp. 597-602
-
-
Nagai, S.1
Dubrana, K.2
Tsai-Pflugfelder, M.3
Davidson, M.B.4
Roberts, T.M.5
Brown, G.W.6
Varela, E.7
Hediger, F.8
Gasser, S.M.9
Krogan, N.J.10
-
34
-
-
34547726640
-
Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes
-
Palancade, B., Liu, X., Garcia-Rubio, M., Aguilera, A., Zhao, X., and Doye, V. (2007). Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes. Mol. Biol. Cell 18, 2912-2923.
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 2912-2923
-
-
Palancade, B.1
Liu, X.2
Garcia-Rubio, M.3
Aguilera, A.4
Zhao, X.5
Doye, V.6
-
35
-
-
0038799991
-
Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
-
Paques, F., and Haber, J. E. (1999). Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 63, 349-404.
-
(1999)
Microbiol. Mol. Biol. Rev
, vol.63
, pp. 349-404
-
-
Paques, F.1
Haber, J.E.2
-
36
-
-
33749034730
-
Topoisomerase I inhibitors: Camptothecins and beyond
-
Pommier, Y. (2006). Topoisomerase I inhibitors: camptothecins and beyond. Nat. Rev. Cancer 6, 789-802.
-
(2006)
Nat. Rev. Cancer
, vol.6
, pp. 789-802
-
-
Pommier, Y.1
-
37
-
-
0033829791
-
RAD52-dependent and -independent homologous recombination initiated by Flp recombinase at a single FRT site flanked by direct repeats
-
Prado, F., Gonzalez-Barrera, S., and Aguilera, A. (2000). RAD52-dependent and -independent homologous recombination initiated by Flp recombinase at a single FRT site flanked by direct repeats. Mol. Gen. Genet. 263, 73- 80.
-
(2000)
Mol. Gen. Genet
, vol.263
, pp. 73-80
-
-
Prado, F.1
Gonzalez-Barrera, S.2
Aguilera, A.3
-
38
-
-
34648840192
-
SUMO-targeted ubiquitin ligases in genome stability
-
Prudden, J., Pebernard, S., Raffa, G., Slavin, D. A., Perry, J. J., Tainer, J. A., McGowan, C. H., and Boddy, M. N. (2007). SUMO-targeted ubiquitin ligases in genome stability. EMBO J. 26, 4089-4101.
-
(2007)
EMBO J
, vol.26
, pp. 4089-4101
-
-
Prudden, J.1
Pebernard, S.2
Raffa, G.3
Slavin, D.A.4
Perry, J.J.5
Tainer, J.A.6
McGowan, C.H.7
Boddy, M.N.8
-
39
-
-
0023431265
-
Roles of the 2 microns gene products in stable maintenance of the 2 microns plasmid of Saccharomyces cerevisiae
-
Reynolds, A. E., Murray, A. W., and Szostak, J. W. (1987). Roles of the 2 microns gene products in stable maintenance of the 2 microns plasmid of Saccharomyces cerevisiae. Mol. Cell. Biol. 7, 3566-3573.
-
(1987)
Mol. Cell. Biol
, vol.7
, pp. 3566-3573
-
-
Reynolds, A.E.1
Murray, A.W.2
Szostak, J.W.3
-
40
-
-
0021153574
-
Separation of yeast chromosome- sized DNAs by pulsed field gradient gel electrophoresis
-
Schwartz, D. C., and Cantor, C. R. (1984). Separation of yeast chromosome- sized DNAs by pulsed field gradient gel electrophoresis. Cell 37, 67-75.
-
(1984)
Cell
, vol.37
, pp. 67-75
-
-
Schwartz, D.C.1
Cantor, C.R.2
-
41
-
-
0003529274
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sherman, F., Fink, G. R., and Hicks, J. B. (1986). Methods in Yeast Genetics, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1986)
Methods in Yeast Genetics
-
-
Sherman, F.1
Fink, G.R.2
Hicks, J.B.3
-
42
-
-
0033833940
-
Involvement of the inverted repeat of the yeast 2-micron plasmid in Flp site-specific and JMD52-dependent homologous recombination
-
Storici, F., and Bruschi, C. V. (2000). Involvement of the inverted repeat of the yeast 2-micron plasmid in Flp site-specific and JMD52-dependent homologous recombination. Mol. Gen. Genet. 263, 81-89.
-
(2000)
Mol. Gen. Genet
, vol.263
, pp. 81-89
-
-
Storici, F.1
Bruschi, C.V.2
-
43
-
-
34648816891
-
Conserved function of RNF4 family proteins in eukaryotes: Targeting a ubiquitin ligase to SUMOylated proteins
-
Sun, H., Leverson, J. D., and Hunter, T. (2007). Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins. EMBO J. 26, 4102-4112.
-
(2007)
EMBO J
, vol.26
, pp. 4102-4112
-
-
Sun, H.1
Leverson, J.D.2
Hunter, T.3
-
44
-
-
36348977099
-
Ubiquitin-dependent proteolytic control of SUMO conjugates
-
Uzunova, K., et al. (2007). Ubiquitin-dependent proteolytic control of SUMO conjugates. J. Biol. Chem. 282, 34167-34175.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 34167-34175
-
-
Uzunova, K.1
-
45
-
-
36348964395
-
The yeast Hex3-Slx8 heterodimer is a ubiquitin ligase stimulated by substrate sumoylation
-
Xie, Y., Kerscher, O., Kroetz, M. B., McConchie, H. F., Sung, P., and Hochstrasser, M. (2007). The yeast Hex3-Slx8 heterodimer is a ubiquitin ligase stimulated by substrate sumoylation. J. Biol. Chem. 282, 34176-34184.
-
(2007)
J. Biol. Chem
, vol.282
, pp. 34176-34184
-
-
Xie, Y.1
Kerscher, O.2
Kroetz, M.B.3
McConchie, H.F.4
Sung, P.5
Hochstrasser, M.6
-
46
-
-
0000856498
-
Two nuclear mutations that block mito- chondrial protein import in yeast
-
Yaffe, M. P., and Schatz, G. (1984). Two nuclear mutations that block mito- chondrial protein import in yeast. Proc. Natl. Acad. Sci. USA 81, 4819-4823.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 4819-4823
-
-
Yaffe, M.P.1
Schatz, G.2
-
47
-
-
9444259173
-
Mlp-dependent anchorage and stabilization of a desumoylating enzyme is required to prevent clonal lethality
-
Zhao, X., Wu, C. Y., and Blobel, G. (2004). Mlp-dependent anchorage and stabilization of a desumoylating enzyme is required to prevent clonal lethality. J. Cell Biol. 167, 605-611.
-
(2004)
J. Cell Biol
, vol.167
, pp. 605-611
-
-
Zhao, X.1
Wu, C.Y.2
Blobel, G.3
|