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Volumn 56, Issue 5, 2008, Pages 257-268

Analysis of the evolutive adaptation of a pyruvate-auxotrophic Escherichia coli mutant;Analyse der evolutiven Adaptation am Beispiel einer pyruvat-auxotrophen Escherichia coli-Mutante

Author keywords

Evolutive adaptation; Flux balance analysis; Systems biology; Visualization of flux distributions

Indexed keywords


EID: 62549163352     PISSN: 01782312     EISSN: None     Source Type: Journal    
DOI: 10.1524/auto.2008.0704     Document Type: Article
Times cited : (1)

References (19)
  • 1
    • 62649151755 scopus 로고    scopus 로고
    • GILLES, E.D.: Regelung - Schlüssel zum Verständnis biologischer Systeme. In: Automatisierungstechnik 50 (1/2002), S. 7-17.
    • GILLES, E.D.: Regelung - Schlüssel zum Verständnis biologischer Systeme. In: Automatisierungstechnik 50 (1/2002), S. 7-17.
  • 2
    • 85017795512 scopus 로고    scopus 로고
    • LEIFHEIT, J.; HEINE, T.; KAWOHL, M.; KING, R.: Rechnergestützte halbautomatische Modellierung biotechnologischer Prozesse. In: Automatisierungstechnik 55 (5/2007), S. 211-218.
    • LEIFHEIT, J.; HEINE, T.; KAWOHL, M.; KING, R.: Rechnergestützte halbautomatische Modellierung biotechnologischer Prozesse. In: Automatisierungstechnik 55 (5/2007), S. 211-218.
  • 3
    • 0037075690 scopus 로고    scopus 로고
    • WIECHERT, W.: Modeling and simulation: tools for metabolic engineering. In: J Biotechnol 94 (2002), Mar, Nr. 1, S. 37-63.
    • WIECHERT, W.: Modeling and simulation: tools for metabolic engineering. In: J Biotechnol 94 (2002), Mar, Nr. 1, S. 37-63.
  • 4
    • 0035232377 scopus 로고    scopus 로고
    • U.: Evolutionary engineering of industrially important microbial phenotypes
    • SAUER, S
    • SAUER, U.: Evolutionary engineering of industrially important microbial phenotypes. In: Adv Biochem Eng Biotechnol 73 (2001), S. 129-169.
    • (2001) Adv Biochem Eng Biotechnol , vol.73 , pp. 129-169
  • 5
    • 33646362289 scopus 로고    scopus 로고
    • Latent pathway activation and increased pathway capacity enable Escherichia coli adaptation to loss of key metabolic enzymes
    • Mar, S
    • FONG, S.S.; NANCHEN, A.; PALSSON, B.O.; SAUER, U.: Latent pathway activation and increased pathway capacity enable Escherichia coli adaptation to loss of key metabolic enzymes. In: J Biol Chem 281 (2006), Mar, Nr. 12, S. 8024-8033. http://dx.doi.org/10.1074/ jbc.M510016200. - DOI 10.1074/jbc.M510016200.
    • (2006) J Biol Chem , vol.281 , Issue.12 , pp. 8024-8033
    • FONG, S.S.1    NANCHEN, A.2    PALSSON, B.O.3    SAUER, U.4
  • 6
    • 30344472977 scopus 로고    scopus 로고
    • Adaptive evolution by optimizing expression levels in different environments
    • Jan, S
    • BABU, M.M.; ARAVIND, L.: Adaptive evolution by optimizing expression levels in different environments. In: Trends Microbiol 14 (2006), Jan, Nr. 1, S. 11-14. http://dx.doi.org/10.1016/ j.tim.2005.11.005. - DOI 10.1016/j.tim.2005.11.005.
    • (2006) Trends Microbiol , vol.14 , Issue.1 , pp. 11-14
    • BABU, M.M.1    ARAVIND, L.2
  • 7
    • 0037079023 scopus 로고    scopus 로고
    • Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
    • Nov, S
    • IBARRA, R.U.; EDWARDS, J.S.; PALSSON, B.O.: Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. In: Nature 420 (2002), Nov, Nr. 6912, S. 186-189. http://dx.doi.org/10.1038/nature01149. - DOI 10.1038/nature01149.
    • (2002) Nature , vol.420 , Issue.6912 , pp. 186-189
    • IBARRA, R.U.1    EDWARDS, J.S.2    PALSSON, B.O.3
  • 8
    • 23144432213 scopus 로고    scopus 로고
    • Optimality and evolutionary tuning of the expression level of a protein
    • Jul, S
    • Dekel, E.; Alon, U.: Optimality and evolutionary tuning of the expression level of a protein. In: Nature 436 (2005), Jul, Nr. 7050, S. 588-592. http://dx.doi.org/10.1038/nature03842. - DOI 10.1038/ nature03842.
    • (2005) Nature , vol.436 , Issue.7050 , pp. 588-592
    • Dekel, E.1    Alon, U.2
  • 10
    • 0001639179 scopus 로고
    • J.: The Growth of Bacterial Cultures
    • MONOD, S
    • MONOD, J.: The Growth of Bacterial Cultures. In: Annual Review of Microbiology 3 (1949), S. 371-394.
    • (1949) Annual Review of Microbiology , vol.3 , pp. 371-394
  • 11
    • 35348887734 scopus 로고    scopus 로고
    • Metabolic flux analysis for optimizing the specific growth rate of recombinant Aspergillus niger
    • Nov, S
    • GHESHKAGHI, R.; SCHARER, J.M.; MOO-YOUNG, M.; DOUGLAS, P. L.: Metabolic flux analysis for optimizing the specific growth rate of recombinant Aspergillus niger. In: Bioprocess Biosyst Eng 30 (2007), Nov, Nr. 6, S. 397-418. http://dx.doi.org/10.1007/ s00449-007-0136-x. - DOI 10.1007/s00449-007-0136-x.
    • (2007) Bioprocess Biosyst Eng , vol.30 , Issue.6 , pp. 397-418
    • GHESHKAGHI, R.1    SCHARER, J.M.2    MOO-YOUNG, M.3    DOUGLAS, P.L.4
  • 12
    • 34347332311 scopus 로고    scopus 로고
    • A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information
    • S
    • FEIST, A.M.; HENRY, C.S.; REED, J.L.; KRUMMENACKER, M.; JOYCE, A.R.; KARP, P.D.; BROADBELT, L.J.; HATZIMANIKATIS, V.; PALSSON, B.O.: A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information. In: Mol Syst Biol 3 (2007), S. 121. http://dx.doi.org/10.1038/msb4100155. - DOI 10.1038/msb4100155.
    • (2007) Mol Syst Biol , vol.3 , pp. 121
    • FEIST, A.M.1    HENRY, C.S.2    REED, J.L.3    KRUMMENACKER, M.4    JOYCE, A.R.5    KARP, P.D.6    BROADBELT, L.J.7    HATZIMANIKATIS, V.8    PALSSON, B.O.9
  • 14
    • 34447523907 scopus 로고    scopus 로고
    • Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli
    • S
    • SCHUETZ, R.; KUEPFER, L.; SAUER, U.: Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli. In: Mol Syst Biol 3 (2007), S. 119. http://dx.doi.org/ 10.1038/msb4100162. - DOI 10.1038/msb4100162.
    • (2007) Mol Syst Biol , vol.3 , pp. 119
    • SCHUETZ, R.1    KUEPFER, L.2    SAUER, U.3
  • 15
    • 2942579562 scopus 로고    scopus 로고
    • Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions
    • S
    • EDWARDS, J.S.; PALSSON, B.O.: Metabolic flux balance analysis and the in silico analysis of Escherichia coli K-12 gene deletions. In: BMC Bioinformatics 1 (2000), S. 1.
    • (2000) BMC Bioinformatics , vol.1 , pp. 1
    • EDWARDS, J.S.1    PALSSON, B.O.2
  • 16
    • 0036001069 scopus 로고    scopus 로고
    • Metabolic modelling of microbes: The flux-balance approach
    • Mar, S
    • EDWARDS, J.S.; COVERT, M.; PALSSON, B.O.: Metabolic modelling of microbes: The flux-balance approach. In: Environ Microbiol 4 (2002), Mar, Nr. 3, S. 133-140.
    • (2002) Environ Microbiol , vol.4 , Issue.3 , pp. 133-140
    • EDWARDS, J.S.1    COVERT, M.2    PALSSON, B.O.3
  • 17
    • 31144448020 scopus 로고    scopus 로고
    • Algorithmic approaches for computing elementary modes in large biochemical reaction networks
    • Dec, S
    • KLAMT, S.; GAGNEUR, J.; KAMP, A VON: Algorithmic approaches for computing elementary modes in large biochemical reaction networks. In: IEE Proc Syst Biol 152 (2005), Dec, Nr. 4, S. 249-255.
    • (2005) IEE Proc Syst Biol , vol.152 , Issue.4 , pp. 249-255
    • KLAMT, S.1    GAGNEUR, J.2    KAMP3    VON, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.