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Volumn 110, Issue 3, 2008, Pages 213-217

Biological role of Escherichia coli translesion synthesis DNA polymerase IV

(1)  Matic, Ivan a  

a INSERM   (France)

Author keywords

Alkylation damage; dinB; DNA repair; Escherichia coli

Indexed keywords

ALKYLATING AGENT; DNA POLYMERASE; DNA POLYMERASE IV; S ADENOSYLMETHIONINE; UNCLASSIFIED DRUG;

EID: 59349093885     PISSN: 00315362     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (1)

References (47)
  • 1
    • 0347416710 scopus 로고    scopus 로고
    • Error-prone DNA polymerases: When making a mistake is the only way to get ahead
    • RATTRAY AJ, STRATHERN J N 2003 Error-prone DNA polymerases: when making a mistake is the only way to get ahead. Annu Rev Genet 37: 31-66
    • (2003) Annu Rev Genet , vol.37 , pp. 31-66
    • RATTRAY, A.J.1    STRATHERN, J.N.2
  • 3
    • 0037310493 scopus 로고    scopus 로고
    • Damage repair DNA polymerases Y
    • YANG W 2003 Damage repair DNA polymerases Y. Curr Opin Struct Biol 13: 23-30
    • (2003) Curr Opin Struct Biol , vol.13 , pp. 23-30
    • YANG, W.1
  • 4
    • 0037205001 scopus 로고    scopus 로고
    • Specialized DNA polymerases, cellular survival, and the genesis of mutations
    • FRIEDBERG E C, WAGNER R, RADMAN M 2002 Specialized DNA polymerases, cellular survival, and the genesis of mutations. Science 296: 1627-1630
    • (2002) Science , vol.296 , pp. 1627-1630
    • FRIEDBERG, E.C.1    WAGNER, R.2    RADMAN, M.3
  • 5
    • 33750344433 scopus 로고    scopus 로고
    • Environmental stress and lesion-bypass DNA polymerases
    • NOHMI T 2006 Environmental stress and lesion-bypass DNA polymerases. Annu Rev Microbiol 60: 231-253
    • (2006) Annu Rev Microbiol , vol.60 , pp. 231-253
    • NOHMI, T.1
  • 6
    • 0035023305 scopus 로고    scopus 로고
    • Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli
    • COURCELLE J, KHODURSKY A, PETER B, BROWN P O, HANAWALT P C 2001 Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli. Genetics 158: 41-64
    • (2001) Genetics , vol.158 , pp. 41-64
    • COURCELLE, J.1    KHODURSKY, A.2    PETER, B.3    BROWN, P.O.4    HANAWALT, P.C.5
  • 9
    • 0035265678 scopus 로고    scopus 로고
    • SOS mutator DNA polymerase IV functions in adaptive mutation and not adaptive amplification
    • MCKENZIE G J, LEE P L, LOMBARDO M J, HASTINGS P J, ROSENBERG S M 2001 SOS mutator DNA polymerase IV functions in adaptive mutation and not adaptive amplification. Mol Cell 7:571-579
    • (2001) Mol Cell , vol.7 , pp. 571-579
    • MCKENZIE, G.J.1    LEE, P.L.2    LOMBARDO, M.J.3    HASTINGS, P.J.4    ROSENBERG, S.M.5
  • 10
    • 1642267937 scopus 로고    scopus 로고
    • Polymerases leave fingerprints: Analysis of the mutational spectrum in Escherichia coli rpoB to assess the role of polymerase IV in spontaneous mutation
    • OLFF E, KIM M, HU K, YANG H, MILLER J H 2004 Polymerases leave fingerprints: analysis of the mutational spectrum in Escherichia coli rpoB to assess the role of polymerase IV in spontaneous mutation. J Bacteriol 186: 2900-2905
    • (2004) J Bacteriol , vol.186 , pp. 2900-2905
    • OLFF, E.1    KIM, M.2    HU, K.3    YANG, H.4    MILLER, J.H.5
  • 11
    • 0142062024 scopus 로고    scopus 로고
    • LAYTON J C, FOSTER P L 2003 Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol Microbiol 50: 549-561
    • LAYTON J C, FOSTER P L 2003 Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli. Mol Microbiol 50: 549-561
  • 12
    • 11844294113 scopus 로고    scopus 로고
    • Error-prone DNA polymerase IV is regulated by the heat shock chaperone GroE in Escherichia coli
    • LAYTON J C, FOSTER P L 2005 Error-prone DNA polymerase IV is regulated by the heat shock chaperone GroE in Escherichia coli. J Bacteriol 187: 449-457
    • (2005) J Bacteriol , vol.187 , pp. 449-457
    • LAYTON, J.C.1    FOSTER, P.L.2
  • 13
    • 0031443646 scopus 로고    scopus 로고
    • Multiple pathways for SOS-induced mutagenesis in Escherichia coli: An overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA
    • KIM S R, MAENHAUT-MICHEL G, YAMADA M, YAMAMOTO Y, MATSUI K, SOFUNI T, NOHMI T, OHMORI H 1997 Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA. Proc Natl Acad Sci U S A 94: 13792-13797
    • (1997) Proc Natl Acad Sci U S A , vol.94 , pp. 13792-13797
    • KIM, S.R.1    MAENHAUT-MICHEL, G.2    YAMADA, M.3    YAMAMOTO, Y.4    MATSUI, K.5    SOFUNI, T.6    NOHMI, T.7    OHMORI, H.8
  • 14
    • 0036171550 scopus 로고    scopus 로고
    • The processivity factor beta controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo
    • ENNE-SAMUEL N, WAGNER J, ETIENNE H, FUCHS R P 2002 The processivity factor beta controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo. EMBO Rep 3: 45-49
    • (2002) EMBO Rep , vol.3 , pp. 45-49
    • ENNE-SAMUEL, N.1    WAGNER, J.2    ETIENNE, H.3    FUCHS, R.P.4
  • 15
    • 0022515733 scopus 로고
    • Role of RecA protein in untargeted UV mutagenesis of bacteriophage lambda: Evidence for the requirement for the dinB gene
    • BROTCORNE-LANNOYE A, MAENHAUT-MICHEL G 1986 Role of RecA protein in untargeted UV mutagenesis of bacteriophage lambda: evidence for the requirement for the dinB gene. Proc Natl Acad Sci U S A 83: 3904-3908
    • (1986) Proc Natl Acad Sci U S A , vol.83 , pp. 3904-3908
    • BROTCORNE-LANNOYE, A.1    MAENHAUT-MICHEL, G.2
  • 17
    • 0037853272 scopus 로고    scopus 로고
    • Error-prone polymerase, DNA polymerase IV, is responsible for transient hypermutation during adaptive mutation in Escherichia coli
    • TOMPKINS J D, NELSON J L, HAZEL J C, LEUGERS S L, STUMPF J D, FOSTER P L 2003 Error-prone polymerase, DNA polymerase IV, is responsible for transient hypermutation during adaptive mutation in Escherichia coli. J Bacteriol 185: 3469-3472
    • (2003) J Bacteriol , vol.185 , pp. 3469-3472
    • TOMPKINS, J.D.1    NELSON, J.L.2    HAZEL, J.C.3    LEUGERS, S.L.4    STUMPF, J.D.5    FOSTER, P.L.6
  • 18
    • 0037172966 scopus 로고    scopus 로고
    • SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness
    • YEISER B, PEPPER E D, GOODMAN M F, FINKEL S E 2002 SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness. Proc Natl Acad Sci U S A 99: 8737-8741
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 8737-8741
    • YEISER, B.1    PEPPER, E.D.2    GOODMAN, M.F.3    FINKEL, S.E.4
  • 19
    • 10044234196 scopus 로고    scopus 로고
    • Properties and functions of Escherichia coli:PolIV and PoIV
    • FUCHS R P, FUJII S, WAGNER J 2004 Properties and functions of Escherichia coli:PolIV and PoIV. Adv Protein Chem 69: 229-264
    • (2004) Adv Protein Chem , vol.69 , pp. 229-264
    • FUCHS, R.P.1    FUJII, S.2    WAGNER, J.3
  • 20
    • 30544445218 scopus 로고    scopus 로고
    • A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates
    • JAROSZ, D F, GODOY V G, DELANEY J C, ESSIGMANN J M, WALKER G C 2006 A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates. Nature 439: 225-228
    • (2006) Nature , vol.439 , pp. 225-228
    • JAROSZ, D.F.1    GODOY, V.G.2    DELANEY, J.C.3    ESSIGMANN, J.M.4    WALKER, G.C.5
  • 21
    • 0242362731 scopus 로고    scopus 로고
    • Analysis of translesion replication across an abasic site by DNA polymerase IV of Escherichia coli
    • MAOR-SHOSHANI A, HAYASHI K, OHMORI H,LIVNEH Z 2003 Analysis of translesion replication across an abasic site by DNA polymerase IV of Escherichia coli. DNA Repair (Amst) 2: 1227-1238
    • (2003) DNA Repair (Amst) , vol.2 , pp. 1227-1238
    • MAOR-SHOSHANI, A.1    HAYASHI, K.2    OHMORI, H.3    LIVNEH, Z.4
  • 22
    • 34547124881 scopus 로고    scopus 로고
    • Involvement of Escherichia coli DNA polymerase IV in tolerance of cytotoxic alkylating DNA lesions in vivo
    • BJEDOV I, DASGUPTA C N, SLADE D, LE BLASTIER S, SELVA M, MATIC I 2007 Involvement of Escherichia coli DNA polymerase IV in tolerance of cytotoxic alkylating DNA lesions in vivo. Genetics 176: 1431-1440
    • (2007) Genetics , vol.176 , pp. 1431-1440
    • BJEDOV, I.1    DASGUPTA, C.N.2    SLADE, D.3    LE BLASTIER, S.4    SELVA, M.5    MATIC, I.6
  • 23
    • 0034462969 scopus 로고    scopus 로고
    • Role of the dinB gene product in spontaneous mutation in Escherichia coli with an impaired replicative polymerase
    • STRAUSS B S, ROBERTS R, FRANCIS L, POURYAZDANPARAST P 2000 Role of the dinB gene product in spontaneous mutation in Escherichia coli with an impaired replicative polymerase. J Bacteriol 182: 6742-6750
    • (2000) J Bacteriol , vol.182 , pp. 6742-6750
    • STRAUSS, B.S.1    ROBERTS, R.2    FRANCIS, L.3    POURYAZDANPARAST, P.4
  • 24
    • 0742305875 scopus 로고    scopus 로고
    • Repairing DNA-methylation damage
    • SEDGWICK B 2004 Repairing DNA-methylation damage. Nat Rev Mol Cell Biol 5: 148-157
    • (2004) Nat Rev Mol Cell Biol , vol.5 , pp. 148-157
    • SEDGWICK, B.1
  • 25
    • 0035066552 scopus 로고    scopus 로고
    • Transcriptional responses to DNA damage
    • VOLKERT M R, LANDINI P2001 Transcriptional responses to DNA damage. Curr Opin Microbiol 4: 178-185
    • (2001) Curr Opin Microbiol , vol.4 , pp. 178-185
    • VOLKERT, M.R.1    LANDINI, P.2
  • 27
    • 0033180391 scopus 로고    scopus 로고
    • 3-methyladenine DNA glycosylases: Structure, function, and biological importance
    • WYATT M D, ALLAN J M, LAU A Y, ELLENBERGER T E, SAMSON L D 1999 3-methyladenine DNA glycosylases: structure, function, and biological importance. Bioessays 21: 668-676
    • (1999) Bioessays , vol.21 , pp. 668-676
    • WYATT, M.D.1    ALLAN, J.M.2    LAU, A.Y.3    ELLENBERGER, T.E.4    SAMSON, L.D.5
  • 28
    • 0021528507 scopus 로고
    • 3-Methyladenine residues in DNA induce the SOS function sfiA in Escherichia coli
    • BOITEUX S, HUISMAN O, LAVAL J 1984 3-Methyladenine residues in DNA induce the SOS function sfiA in Escherichia coli. EMBO J 3: 2569-2573
    • (1984) EMBO J , vol.3 , pp. 2569-2573
    • BOITEUX, S.1    HUISMAN, O.2    LAVAL, J.3
  • 29
    • 0021858490 scopus 로고
    • Induction of transversion mutations in Escherichia coli by N-methyl-N'-nitro-N-nitrosoguanidine is SOS dependent
    • FOSTER P L, EISENSTADT E 1985 Induction of transversion mutations in Escherichia coli by N-methyl-N'-nitro-N-nitrosoguanidine is SOS dependent. J Bacteriol 163: 213-220
    • (1985) J Bacteriol , vol.163 , pp. 213-220
    • FOSTER, P.L.1    EISENSTADT, E.2
  • 30
    • 0032704609 scopus 로고    scopus 로고
    • Expression of the Escherichia coli ada regulon in stationary phase: Evidence for rpoS-dependent negative regulation of alkA transcription
    • LANDINI P, BUSBY S J 1999 Expression of the Escherichia coli ada regulon in stationary phase: evidence for rpoS-dependent negative regulation of alkA transcription. J Bacteriol 181: 6836-6839
    • (1999) J Bacteriol , vol.181 , pp. 6836-6839
    • LANDINI, P.1    BUSBY, S.J.2
  • 31
    • 0029810398 scopus 로고    scopus 로고
    • Generation of an endogenous DNA-methylating agent by nitrosation in Escherichia coli
    • TAVERNA P, SEDGWICK B 1996 Generation of an endogenous DNA-methylating agent by nitrosation in Escherichia coli. J Bacteriol 178: 5105-5111
    • (1996) J Bacteriol , vol.178 , pp. 5105-5111
    • TAVERNA, P.1    SEDGWICK, B.2
  • 32
    • 0022973666 scopus 로고
    • + genes in Escherichia coli: Identification of gene products and effects on alkylation resistance
    • + genes in Escherichia coli: identification of gene products and effects on alkylation resistance. J Bacteriol 168: 642-647
    • (1986) J Bacteriol , vol.168 , pp. 642-647
    • KAASEN, I.1    EVENSEN, G.2    SEEBERG, E.3
  • 33
    • 33644551556 scopus 로고    scopus 로고
    • Y-family DNA polymerases respond to DNA damage-independent inhibition of replication fork progression
    • GODOY V G, JAROSZ D F, WALKER F L, SIMMONS L A, WALKER G C 2006 Y-family DNA polymerases respond to DNA damage-independent inhibition of replication fork progression. EMBO J 25: 868-879
    • (2006) EMBO J , vol.25 , pp. 868-879
    • GODOY, V.G.1    JAROSZ, D.F.2    WALKER, F.L.3    SIMMONS, L.A.4    WALKER, G.C.5
  • 34
    • 10944232640 scopus 로고    scopus 로고
    • The Escherichia coli Fis promoter is regulated by changes in the levels of its transcription initiation nucleotide CTP
    • WALKER K, MALLIK P, PRATT T S, OSUNA R 2004 The Escherichia coli Fis promoter is regulated by changes in the levels of its transcription initiation nucleotide CTP. J Biol Chem 279: 50818-50828
    • (2004) J Biol Chem , vol.279 , pp. 50818-50828
    • WALKER, K.1    MALLIK, P.2    PRATT, T.S.3    OSUNA, R.4
  • 35
    • 33744789415 scopus 로고    scopus 로고
    • The Y-family DNA polymerase kappa (pol kappa) functions in mammalian nucleotide-excision repair
    • OGI T, LEHMANN A R 2006 The Y-family DNA polymerase kappa (pol kappa) functions in mammalian nucleotide-excision repair. Nat Cell Biol 8: 640-642
    • (2006) Nat Cell Biol , vol.8 , pp. 640-642
    • OGI, T.1    LEHMANN, A.R.2
  • 36
    • 1642354816 scopus 로고    scopus 로고
    • Distinct signatures for mutator sensitivity of lacZ reversions and for the spectrum of lacI/lacO forward mutations on the chromosome of non-dividing Escherichia coli
    • BHARATAN S M, REDDY M, GOWRISHANKAR J 2004 Distinct signatures for mutator sensitivity of lacZ reversions and for the spectrum of lacI/lacO forward mutations on the chromosome of non-dividing Escherichia coli. Genetics 166: 681-692
    • (2004) Genetics , vol.166 , pp. 681-692
    • BHARATAN, S.M.1    REDDY, M.2    GOWRISHANKAR, J.3
  • 37
    • 0028241445 scopus 로고
    • DNA alkylation repair limits spontaneous base substitution mutations in Escherichia coli
    • MACKAY W J, HAN S, SAMSON L D 1994 DNA alkylation repair limits spontaneous base substitution mutations in Escherichia coli. J Bacteriol 176: 3224-3230
    • (1994) J Bacteriol , vol.176 , pp. 3224-3230
    • MACKAY, W.J.1    HAN, S.2    SAMSON, L.D.3
  • 39
    • 33644857994 scopus 로고    scopus 로고
    • Environmental tuning of mutation rates
    • SAINT-RUF C, MATIC I 2006 Environmental tuning of mutation rates. Environ Microbiol 8: 193-199
    • (2006) Environ Microbiol , vol.8 , pp. 193-199
    • SAINT-RUF, C.1    MATIC, I.2
  • 40
    • 5144223827 scopus 로고    scopus 로고
    • Stress and survival of aging Escherichia coli rpoS colonies
    • SAINT-RUF C, TADDEI F, MATIC I 2004 Stress and survival of aging Escherichia coli rpoS colonies. Genetics 168: 541-546
    • (2004) Genetics , vol.168 , pp. 541-546
    • SAINT-RUF, C.1    TADDEI, F.2    MATIC, I.3
  • 41
    • 0037115934 scopus 로고    scopus 로고
    • Recent progress on the Ada response for inducible repair of DNA alkylation damage
    • LINDAHLT
    • SEDGWICK B, LINDAHLT 2002 Recent progress on the Ada response for inducible repair of DNA alkylation damage. Oncogene 21: 8886-8894
    • (2002) Oncogene , vol.21 , pp. 8886-8894
    • SEDGWICK, B.1
  • 42
    • 0034212585 scopus 로고    scopus 로고
    • Evaluation of fecal mutagenicity and colorectal cancer risk
    • DE KOK T M, VAN MAANEN J M 2000 Evaluation of fecal mutagenicity and colorectal cancer risk. Mutat Res 463: 53-101
    • (2000) Mutat Res , vol.463 , pp. 53-101
    • DE KOK, T.M.1    VAN MAANEN, J.M.2
  • 44
    • 0033565398 scopus 로고    scopus 로고
    • N-Nitroso compounds in the diet
    • LIJINSKY W 1999 N-Nitroso compounds in the diet. Mutat Res 443: 129-138
    • (1999) Mutat Res , vol.443 , pp. 129-138
    • LIJINSKY, W.1
  • 45
    • 33644867114 scopus 로고    scopus 로고
    • Involvement of vertebrate Polkappa in translesion DNA synthesis across DNA monoalkylation damage
    • TAKENAKA K, OGI T, OKADA T, SONODA E, GUO C, FRIEDBERG E C, TAKEDA S 2006 Involvement of vertebrate Polkappa in translesion DNA synthesis across DNA monoalkylation damage. J Biol Chem 281: 2000-2004
    • (2006) J Biol Chem , vol.281 , pp. 2000-2004
    • TAKENAKA, K.1    OGI, T.2    OKADA, T.3    SONODA, E.4    GUO, C.5    FRIEDBERG, E.C.6    TAKEDA, S.7
  • 46
    • 42449091527 scopus 로고    scopus 로고
    • Eukaryotic Y-family polymerases bypass a 3-methyl-2′-deoxyadenosine analog in vitro and methyl methanesulfonate-induced DNA damage in vivo
    • PLOSKY B S, FRANK E G, BERRY D A, VENNALL G P, MCDONALD J P, WOODGATE R 2008 Eukaryotic Y-family polymerases bypass a 3-methyl-2′-deoxyadenosine analog in vitro and methyl methanesulfonate-induced DNA damage in vivo. Nucleic Acids Res 36: 2152-2162
    • (2008) Nucleic Acids Res , vol.36 , pp. 2152-2162
    • PLOSKY, B.S.1    FRANK, E.G.2    BERRY, D.A.3    VENNALL, G.P.4    MCDONALD, J.P.5    WOODGATE, R.6


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