Adaptive mutation in Escherichia coli

Cold Spring Harbor Symposia on Quantitative Biology

Volumn 65, Issue , 2000, Pages 21-29

  Foster, P L ^a  

^a INDIANA UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CONFERENCE PAPER; DNA REPAIR; DNA REPLICATION; DNA STRAND BREAKAGE; DNA SYNTHESIS; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; GENE INDUCTION; GENE MUTATION; GENETIC RECOMBINATION; NONHUMAN; PRIORITY JOURNAL; ARTICLE; BACTERIAL MUTATION; BACTERIUM CULTURE; ADAPTATION; BIOLOGICAL MODEL; GENETICS; MUTATION; REVIEW;

ESCHERICHIA COLI;

DNA POLYMERASE; LACTOSE;

ADAPTATION, PHYSIOLOGICAL; ESCHERICHIA COLI; MODELS, GENETIC; MUTATION; RECOMBINATION, GENETIC; SUPPORT, U.S. GOV'T, NON-P.H.S.;

EID: 0034437340     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.2000.65.21     Document Type: Conference Paper

References (80)

1. Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon
2. Spontaneous and UV-induced mutations in Escherichia coli K-12 strains with altered or absent DNA polymerase I
3. Mechanism for induction of adaptive mutations in Escherichia coli
4. Evidence that stationary-phase hypermutation in the Escherichia coli chromosome is promoted by recombination
5. Mutation and cancer: The antecedents to our studies of adaptive mutation
6. Appendix to The role of transient hypermutators in adaptive mutation in Escherichia coli
7. Adaptive reversion of a frameshift mutation in Escherichia coli
8. The origin of mutants
9. Genetic and sequence analysis of frameshift mutations induced by ICR-191
10. traY and traI are required for oriT-dependent enhanced recombination between lac-containing plasmids and lambda plac5
11. The role of oriT in tra-dependent enhanced recombination between mini-F-lac -oriT and lambda plac5
12. Role of Escherichia coli RecBC enzyme in SOS induction
13. The importance of repairing stalled replication forks
14. Involvement of Escherichia coli DNA polymerase II in response to oxidative damage and adaptive mutation
15. Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cells
16. Antimutator mutations in the α subunit of Escherichia coli DNA polymerase III: Identification of the responsible mutations and alignment with other DNA polymerases
17. Structure and function of the F factor and mechanism of conjugation
18. Adaptive mutation: The uses of adversity
19. - strain of Escherichia coli during selection for lactose utilization
20. Nonadaptive mutations occur on the F' episome during adaptive mutation conditions in Escherichia coli
21. Adaptive mutation: Has the unicorn landed?
22. Are adaptive mutations due to a decline in mismatch repair? The evidence is lacking
23. Mechanisms of stationary phase mutation: A decade of adaptive mutation
24. Mechanisms of directed mutation
25. Increased episomal replication accounts for the high rate of adaptive mutation in recD mutants of Escherichia coli
26. Adaptive reversion of a frameshift mutation in Escherichia coli by simple base deletions in homopolymeric runs
27. Adaptive reversion of an episomal frameshift mutation in Escherichia coli requires conjugal functions but not actual conjugation
28. Conjugation is not required for adaptive reversion of an episomal frameshift mutation in Escherichia coli
29. Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli
30. Proofreading-defective DNA polymerase II increases adaptive mutation in Escherichia coli
31. - phenocopies: Characterization of expression of the F transfer region in stationary phase
32. Evidence that F plasmid transfer replication underlies apparent adaptive mutation
33. Some features of the mutability of bacteria during nonlethal selection
34. Coping with replication 'train wrecks' in Escherichia coli using Pol V, Pol II and RecA proteins
35. Spontaneous point mutations that occur more often when they are advantageous than when they are neutral
36. A direct role for DNA polymerase III in adaptive reversion of a frameshift mutation in Escherichia coli
37. Recombination in adaptive mutation
38. Opposing roles of the Holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutation
39. A role for REV3 in mutagenesis during double-strand break repair in Saccharomyces cerevisiae
40. Multiple pathways for SOS-induced mutagenesis in Escherichia coli: An overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA
41. Is RecF a DNA replication protein?
42. Stable DNA replication: Interplay between DNA replication, homologous recombination, and transcription
43. The DNA replication priming protein, PriA, is required for homologous recombination and double-strand break repair
44. Initiation of genetic recombination and recombination-dependent replication
45. Collapse and repair of replication forks in Escherichia coli
46. Recombinational repair of DNA damage in Escherichia coli and bacteriophage λ
47. Double-strand end repair via the RecBC pathway in Escherichia coli primes DNA replication
48. Genetic analysis of the recG locus of Escherichia coli K12 and of its role in recombination and DNA repair
49. Mutations of bacteria from virus sensitivity to virus resistance
50. Some problems connected with spontaneous biochemical mutations in bacteria
51. Resolution of Holliday intermediates in recombination and DNA repair: Indirect suppression of ruvA, ruvB, and ruvC mutations
52. Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
53. The SOS response regulates adaptive mutation
54. Mutagenic specificity of ultraviolet light
55. Mismatch repair in replication fidelity, genetic recombination, and cancer biology
56. Recombination and recombination-dependent DNA replication in bacteriophage T4
57. Lac repressor can be fused to β-galactosidase
58. Transient mutators: A semiquantitative analysis of the influence of translation and transcription errors on mutation rates
59. Adaptive mutation in Escherichia coli: A role for conjugation
60. Enzymes of evolutionary change
61. A phenotype for enigmatic DNA polymerase II: A pivotal role for Pol II in replication restart in UV-irradiated Escherichia coli
62. A genetic strategy to demonstrate the occurrence of spontaneous mutations in non-dividing cells within colonies of Escherichia coli
63. Evidence that recBC-dependent degradation of duplex DNA in Escherichia coli recD mutants involves DNA unwinding
64. The role of transient hypermutators in adaptive mutation in Escherichia coli
65. Mutation under stress: Adaptive mutation in Escherichia coli
66. Adaptive mutation by deletions in small mononucleotide repeats
67. Spontaneous mutation in non-dividing bacteria
68. Is DNA replication a necessary condition for spontaneous mutation?
69. Differential suppression of priA2: Kan phenotypes in Escherichia coli K-12 by mutations in priA, lexA, and dnaC
70. Enhanced recombination between lambda plac5 and F42lac: Identification of cis- and trans-acting factors
71. RuvAB acts at arrested replication forks
72. Observations on the formation of clones containing araB-lacZ cistron fusions
73. A unicorn in the garden
74. DNA synthesis errors associated with double-strand-break repair
75. UmuD' (2)C is an error-prone DNA polymerase, Escherichia coli Pol V
76. Roles of E. coli DNA polymerase IV and V in lesion-targeted and untargeted SOS mutagenesis
77. Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation
78. The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis
79. Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3′-tailed duplex DNA
80. Reverse branch migration of Holliday junctions by RecG protein: A new mechanism for resolution of intermediates in recombination and DNA repair