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Volumn 102, Issue 1, 2009, Pages 73-80

A hidden square-root boundary between growth rate and biomass yield

Author keywords

Metabolic network; Microbial growth; Theoretical evolution boundary

Indexed keywords

BIOMASS YIELDS; COPY NUMBERS; EXPERIMENTAL DATUM; METABOLIC NETWORK; MICROBIAL GROWTH; PHYSIOLOGICAL PARAMETERS; PRODUCT FORMATIONS; SQUARE ROOTS; SUBSTRATE UPTAKES; SYNTHESIS RATES; THEORETICAL EVOLUTION BOUNDARY; THEORETICAL VALUES; TURN-OVER NUMBERS; UPPER LIMITS;

EID: 58149214616     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.22046     Document Type: Article
Times cited : (23)

References (25)
  • 2
    • 38049001166 scopus 로고    scopus 로고
    • Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
    • Atsumi S, Hanai T, Liao JC. 2008. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 451(7174):86-89.
    • (2008) Nature , vol.451 , Issue.7174 , pp. 86-89
    • Atsumi, S.1    Hanai, T.2    Liao, J.C.3
  • 3
    • 31544450286 scopus 로고    scopus 로고
    • Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection. Mol Syst Biol 2:2006.0008.
    • Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection. Mol Syst Biol 2:2006.0008.
  • 4
    • 0031886572 scopus 로고    scopus 로고
    • Expression of Clostridium acetobutylicum ATCC 824 genes in Escherichia coli for acetone production and acetate detoxification
    • Bermejo LL, Welker NE, Papoutsakis ET. 1998. Expression of Clostridium acetobutylicum ATCC 824 genes in Escherichia coli for acetone production and acetate detoxification. Appl Environ Microbiol 64(3): 1079-1085.
    • (1998) Appl Environ Microbiol , vol.64 , Issue.3 , pp. 1079-1085
    • Bermejo, L.L.1    Welker, N.E.2    Papoutsakis, E.T.3
  • 5
    • 0021874734 scopus 로고
    • Kinetics of nutrient-limited transport and microbial growth
    • Button DK. 1985. Kinetics of nutrient-limited transport and microbial growth. Microbiol Rev 49(3):270-297.
    • (1985) Microbiol Rev , vol.49 , Issue.3 , pp. 270-297
    • Button, D.K.1
  • 6
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci USA 97(12):6640-6645.
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.12 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 7
    • 23144432213 scopus 로고    scopus 로고
    • Optimality and evolutionary tuning of the expression level of a protein
    • Dekel E, Alon U. 2005. Optimality and evolutionary tuning of the expression level of a protein. Nature 436(7050):588-592.
    • (2005) Nature , vol.436 , Issue.7050 , pp. 588-592
    • Dekel, E.1    Alon, U.2
  • 8
    • 0034625143 scopus 로고    scopus 로고
    • The Escherichia coli MG1655 in silico metabolic genotype: Its definition, characteristics, and capabilities
    • Edwards JS, Palsson BO. 2000. The Escherichia coli MG1655 in silico metabolic genotype: Its definition, characteristics, and capabilities. Proc Natl Acad Sci USA 97(10):5528-5533.
    • (2000) Proc Natl Acad Sci USA , vol.97 , Issue.10 , pp. 5528-5533
    • Edwards, J.S.1    Palsson, B.O.2
  • 9
    • 0030853330 scopus 로고    scopus 로고
    • Reduction of aerobic acetate production by Escherichia coli
    • Farmer WR, Liao JC. 1997. Reduction of aerobic acetate production by Escherichia coli. Appl Environ Microbiol 63(8):3205-3210.
    • (1997) Appl Environ Microbiol , vol.63 , Issue.8 , pp. 3205-3210
    • Farmer, W.R.1    Liao, J.C.2
  • 10
    • 0034024497 scopus 로고    scopus 로고
    • Improving lycopene production in Escherichia coli by engineering metabolic control
    • Farmer WR, Liao JC. 2000. Improving lycopene production in Escherichia coli by engineering metabolic control. Nat Biotechnol 18(5):533-537.
    • (2000) Nat Biotechnol , vol.18 , Issue.5 , pp. 533-537
    • Farmer, W.R.1    Liao, J.C.2
  • 11
    • 20044375201 scopus 로고    scopus 로고
    • Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism
    • Fischer E, Sauer U. 2005. Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism. Nat Genet 37(6):636-640.
    • (2005) Nat Genet , vol.37 , Issue.6 , pp. 636-640
    • Fischer, E.1    Sauer, U.2
  • 12
    • 37349093415 scopus 로고    scopus 로고
    • Engineered synthetic pathway for isopropanol production in Escherichia coli
    • Hanai T, Atsumi S, Liao JC. 2007. Engineered synthetic pathway for isopropanol production in Escherichia coli. Appl Environ Microbiol 73(24):7814-7818.
    • (2007) Appl Environ Microbiol , vol.73 , Issue.24 , pp. 7814-7818
    • Hanai, T.1    Atsumi, S.2    Liao, J.C.3
  • 13
    • 4444233112 scopus 로고    scopus 로고
    • Biofilms promote altruism
    • Kreft JU. 2004. Biofilms promote altruism. Microbiology 150(Pt 8):2751-2760.
    • (2004) Microbiology , vol.150 , Issue.PART 8 , pp. 2751-2760
    • Kreft, J.U.1
  • 14
    • 0030571222 scopus 로고    scopus 로고
    • Pathway analysis, engineering, and physiological considerations for redirecting central metabolism. Bio-technol
    • Liao JC, Hou SY, Chao YP. 1996. Pathway analysis, engineering, and physiological considerations for redirecting central metabolism. Bio-technol Bioeng 52(1):129-140.
    • (1996) Bioeng , vol.52 , Issue.1 , pp. 129-140
    • Liao, J.C.1    Hou, S.Y.2    Chao, Y.P.3
  • 15
    • 34247593085 scopus 로고    scopus 로고
    • L-tyrosine production by deregulated strains of Escherichia coli
    • Lutke-Eversloh T, Stephanopoulos G. 2007. L-tyrosine production by deregulated strains of Escherichia coli. Appl Microbiol Biotechnol 75(1):103-110.
    • (2007) Appl Microbiol Biotechnol , vol.75 , Issue.1 , pp. 103-110
    • Lutke-Eversloh, T.1    Stephanopoulos, G.2
  • 16
    • 33745310267 scopus 로고    scopus 로고
    • Resource competition and social conflict in experimental populations of yeast
    • MacLean RC, Gudelj I. 2006. Resource competition and social conflict in experimental populations of yeast. Nature 441(7092):498-501.
    • (2006) Nature , vol.441 , Issue.7092 , pp. 498-501
    • MacLean, R.C.1    Gudelj, I.2
  • 17
    • 0038391517 scopus 로고    scopus 로고
    • Engineering a mevalonate pathway in Escherichia coli for production of terpenoids
    • Martin VJ, Pitera DJ, Withers ST, Newman JD, Keasling JD. 2003. Engineering a mevalonate pathway in Escherichia coli for production of terpenoids. Nat Biotechnol 21(7):796-802.
    • (2003) Nat Biotechnol , vol.21 , Issue.7 , pp. 796-802
    • Martin, V.J.1    Pitera, D.J.2    Withers, S.T.3    Newman, J.D.4    Keasling, J.D.5
  • 18
    • 0031785757 scopus 로고    scopus 로고
    • Sequence analysis of Tn10 insertion sites in a collection of Escherichia coli strains used for genetic mapping and strain construction
    • Nichols BP, Shafiq Q, Meiners V. 1998. Sequence analysis of Tn10 insertion sites in a collection of Escherichia coli strains used for genetic mapping and strain construction. J Bacteriol 180(23):6408-6411.
    • (1998) J Bacteriol , vol.180 , Issue.23 , pp. 6408-6411
    • Nichols, B.P.1    Shafiq, Q.2    Meiners, V.3
  • 19
    • 0035917865 scopus 로고    scopus 로고
    • Cooperation and competition in the evolution of ATP-producing pathways
    • Pfeiffer T, Schuster S, Bonhoeffer S. 2001. Cooperation and competition in the evolution of ATP-producing pathways. Science 292(5516):504-507.
    • (2001) Science , vol.292 , Issue.5516 , pp. 504-507
    • Pfeiffer, T.1    Schuster, S.2    Bonhoeffer, S.3
  • 20
    • 17644394580 scopus 로고    scopus 로고
    • Reducing the glucose uptake rate in Escherichia coli affects growth rate but not protein production
    • Picon A, Teixeira de Mattos MJ, Postma PW. 2005. Reducing the glucose uptake rate in Escherichia coli affects growth rate but not protein production. Biotechnol Bioeng 90(2):191-200.
    • (2005) Biotechnol Bioeng , vol.90 , Issue.2 , pp. 191-200
    • Picon, A.1    Teixeira de Mattos, M.J.2    Postma, P.W.3
  • 21
    • 0024615221 scopus 로고
    • Enzymic analysis of the crabtree effect in glucose-limited chemostat cultures of Sacchar- omyces cerevisiae
    • Postma E, Verduyn C, Scheffers WA, Van Dijken JP. 1989. Enzymic analysis of the crabtree effect in glucose-limited chemostat cultures of Sacchar- omyces cerevisiae. Appl Environ Microbiol 55(2):468-477.
    • (1989) Appl Environ Microbiol , vol.55 , Issue.2 , pp. 468-477
    • Postma, E.1    Verduyn, C.2    Scheffers, W.A.3    Van Dijken, J.P.4
  • 23
    • 0031923093 scopus 로고    scopus 로고
    • Isolation and characterization of ethanol-tolerant mutants of Escherichia coli KO11 for fuel ethanol production
    • Yomano LP, York SW, Ingram LO. 1998. Isolation and characterization of ethanol-tolerant mutants of Escherichia coli KO11 for fuel ethanol production. J Ind Microbiol Biotechnol 20(2):122-128.
    • (1998) J Ind Microbiol Biotechnol , vol.20 , Issue.2 , pp. 122-128
    • Yomano, L.P.1    York, S.W.2    Ingram, L.O.3
  • 24
    • 33847136816 scopus 로고    scopus 로고
    • On the matching and proportional laws of cybernetic models
    • Young JD, Ramkrishna D. 2007. On the matching and proportional laws of cybernetic models. Biotechnol Prog 23(1):83-99.
    • (2007) Biotechnol Prog , vol.23 , Issue.1 , pp. 83-99
    • Young, J.D.1    Ramkrishna, D.2
  • 25
    • 0036021982 scopus 로고    scopus 로고
    • Improving 1,3-propanediol production from glycerol in a metabolically engineered Escherichia coli by reducing accumulation of sn-glycerol-3-phosphate
    • Zhu MM, Lawman PD, Cameron DC. 2002. Improving 1,3-propanediol production from glycerol in a metabolically engineered Escherichia coli by reducing accumulation of sn-glycerol-3-phosphate. Biotechnol Prog 18(4):694-699.
    • (2002) Biotechnol Prog , vol.18 , Issue.4 , pp. 694-699
    • Zhu, M.M.1    Lawman, P.D.2    Cameron, D.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.