메뉴 건너뛰기




Volumn 50, Issue 1, 2009, Pages 44-58

Molecular phylogeny of the tribe Sphodrini (Coleoptera: Carabidae) based on mitochondrial and nuclear markers

Author keywords

Alignment; Carabidae; Coleoptera; Congruence; Evolution; Phylogeny; Sensitivity analysis; Sphodrini

Indexed keywords

ANIMAL; ARTICLE; BEETLE; CELL NUCLEUS; CLASSIFICATION; GENETIC MARKER; GENETICS; MITOCHONDRIAL GENE; NUCLEOTIDE SEQUENCE; PHYLOGENY; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT;

EID: 57649219932     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2008.09.023     Document Type: Article
Times cited : (30)

References (93)
  • 1
    • 0002215350 scopus 로고
    • Phylogenetische untersuchungen larvalmorphologische merkmale der Carabidae (Insecta: Coleoptera)
    • Arndt E. Phylogenetische untersuchungen larvalmorphologische merkmale der Carabidae (Insecta: Coleoptera). Stuttg. Beitr. Natur., Ser. A 488 (1993) 1-56
    • (1993) Stuttg. Beitr. Natur., Ser. A , vol.488 , pp. 1-56
    • Arndt, E.1
  • 2
    • 0031371067 scopus 로고    scopus 로고
    • Multiple sources of character information and the phylogeny of Hawaiian drosophilids
    • Baker R.H., and DeSalle R. Multiple sources of character information and the phylogeny of Hawaiian drosophilids. Syst. Biol. 46 (1997) 654-673
    • (1997) Syst. Biol. , vol.46 , pp. 654-673
    • Baker, R.H.1    DeSalle, R.2
  • 3
    • 0035527385 scopus 로고    scopus 로고
    • Phylogenetic utility of different types of molecular data used to infer evolutionary relationships among stalk-eyed flies (Diopsidae)
    • Baker R.H., Wilkinson G.S., and DeSalle R. Phylogenetic utility of different types of molecular data used to infer evolutionary relationships among stalk-eyed flies (Diopsidae). Syst. Biol. 50 (2001) 87-105
    • (2001) Syst. Biol. , vol.50 , pp. 87-105
    • Baker, R.H.1    Wilkinson, G.S.2    DeSalle, R.3
  • 4
    • 0036699888 scopus 로고    scopus 로고
    • The utility of the incongruence length difference test
    • Barker F.K., and Lutzoni F.M. The utility of the incongruence length difference test. Syst. Biol. 51 (2002) 625-637
    • (2002) Syst. Biol. , vol.51 , pp. 625-637
    • Barker, F.K.1    Lutzoni, F.M.2
  • 5
    • 1242270885 scopus 로고    scopus 로고
    • New insights into Polychaete phylogeny (Annelida) inferred from 18S rDNA sequences
    • Bleidorn C., Vogt L., and Bartolomaeus T. New insights into Polychaete phylogeny (Annelida) inferred from 18S rDNA sequences. Mol. Phylogenet. Evol. 29 (2003) 279-288
    • (2003) Mol. Phylogenet. Evol. , vol.29 , pp. 279-288
    • Bleidorn, C.1    Vogt, L.2    Bartolomaeus, T.3
  • 6
    • 43949160320 scopus 로고
    • Branch support and tree stability
    • Bremer K. Branch support and tree stability. Cladistics 10 (1994) 295-304
    • (1994) Cladistics , vol.10 , pp. 295-304
    • Bremer, K.1
  • 7
    • 0028303111 scopus 로고
    • Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution
    • Brower A.V.Z. Rapid morphological radiation and convergence among races of the butterfly Heliconius erato inferred from patterns of mitochondrial DNA evolution. Proc. Natl. Acad. Sci. USA 91 (1994) 6491-6495
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 6491-6495
    • Brower, A.V.Z.1
  • 8
    • 57649173600 scopus 로고    scopus 로고
    • Casale, A., 1988. Revisione degli Sphodrina (Coleoptera, Carabidae, Sphodrini). Museo Regionale di Scienze Naturali, Torino, pp. 1-1024.
    • Casale, A., 1988. Revisione degli Sphodrina (Coleoptera, Carabidae, Sphodrini). Museo Regionale di Scienze Naturali, Torino, pp. 1-1024.
  • 9
    • 33847329608 scopus 로고    scopus 로고
    • Evolution and diversification of the forest and hypogean ground-beetle genus Trechus in the Canary Islands
    • Contreras-Díaz H.G., Moya O., Oromí P., and Juan C. Evolution and diversification of the forest and hypogean ground-beetle genus Trechus in the Canary Islands. Mol. Phylogenet. Evol. 42 (2007) 687-699
    • (2007) Mol. Phylogenet. Evol. , vol.42 , pp. 687-699
    • Contreras-Díaz, H.G.1    Moya, O.2    Oromí, P.3    Juan, C.4
  • 10
    • 0034775338 scopus 로고    scopus 로고
    • Evaluation of relationships within the endemic Hawaiian Platynini (Coleoptera:Carabidae) based on molecular and morphological evidence
    • Cryan J.R., Liebherr J.K., Fetzner J.W., and Whiting M.F. Evaluation of relationships within the endemic Hawaiian Platynini (Coleoptera:Carabidae) based on molecular and morphological evidence. Mol. Phylogenet. Evol. 21 (2001) 72-85
    • (2001) Mol. Phylogenet. Evol. , vol.21 , pp. 72-85
    • Cryan, J.R.1    Liebherr, J.K.2    Fetzner, J.W.3    Whiting, M.F.4
  • 11
    • 0030816742 scopus 로고    scopus 로고
    • Can three incongruence tests predict when data should be combined?
    • Cunningham C.W. Can three incongruence tests predict when data should be combined?. Mol. Biol. Evol. 14 (1997) 733-740
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 733-740
    • Cunningham, C.W.1
  • 12
    • 33745230779 scopus 로고    scopus 로고
    • How do insect nuclear ribosomal genes compare to protein-coding genes in phylogenetic utility and nucleotide substitution patterns?
    • Danforth B.N., Lin C.P., and Fang J. How do insect nuclear ribosomal genes compare to protein-coding genes in phylogenetic utility and nucleotide substitution patterns?. Syst. Entomol. 30 (2005) 549-562
    • (2005) Syst. Entomol. , vol.30 , pp. 549-562
    • Danforth, B.N.1    Lin, C.P.2    Fang, J.3
  • 13
    • 0036221248 scopus 로고    scopus 로고
    • When does the incongruence length difference test fail?
    • Darlu P., and Lecointre G. When does the incongruence length difference test fail?. Mol. Biol. Evol. 19 (2002) 432-437
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 432-437
    • Darlu, P.1    Lecointre, G.2
  • 14
    • 0035527367 scopus 로고    scopus 로고
    • Improving interpretation of the decay index for DNA sequence data
    • DeBry R.W. Improving interpretation of the decay index for DNA sequence data. Syst. Biol. 50 (2001) 742-752
    • (2001) Syst. Biol. , vol.50 , pp. 742-752
    • DeBry, R.W.1
  • 15
    • 0005242650 scopus 로고
    • Étude phylogénétique des Coléoptères Adephaga: Redéfinition de la famille des Harpalidae, sensu novo, et position systématique des Pseudomorphinae et Brachinidae
    • Deuve T. Étude phylogénétique des Coléoptères Adephaga: Redéfinition de la famille des Harpalidae, sensu novo, et position systématique des Pseudomorphinae et Brachinidae. Bull. Soc. Entomol. France 92 (1988) 161-182
    • (1988) Bull. Soc. Entomol. France , vol.92 , pp. 161-182
    • Deuve, T.1
  • 16
    • 38349131071 scopus 로고    scopus 로고
    • Exon-intron structure, paralogy and sequenced regions of elongation factor-1 alpha in Hexapoda
    • Djernæs M., and Damgaard J. Exon-intron structure, paralogy and sequenced regions of elongation factor-1 alpha in Hexapoda. Arthropod Syst. Phylogenet. 64 (2006) 45-52
    • (2006) Arthropod Syst. Phylogenet. , vol.64 , pp. 45-52
    • Djernæs, M.1    Damgaard, J.2
  • 17
    • 0034512402 scopus 로고    scopus 로고
    • Noise and incongruence. Interpreting results of the incongruence length difference test
    • Dolphin K., Belshaw R., Orme C.D., and Quicke D.L.J. Noise and incongruence. Interpreting results of the incongruence length difference test. Mol. Phylogenet. Evol. 17 (2000) 401-406
    • (2000) Mol. Phylogenet. Evol. , vol.17 , pp. 401-406
    • Dolphin, K.1    Belshaw, R.2    Orme, C.D.3    Quicke, D.L.J.4
  • 18
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • doi:10.1371/journal.pbio.0040088
    • Drummond A.J., Ho S.Y.W., Phillips M.J., and Rambaut A. Relaxed phylogenetics and dating with confidence. PLoS Biol. 4 5 (2006) e88 doi:10.1371/journal.pbio.0040088
    • (2006) PLoS Biol. , vol.4 , Issue.5
    • Drummond, A.J.1    Ho, S.Y.W.2    Phillips, M.J.3    Rambaut, A.4
  • 19
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond A., and Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7 (2007) 214
    • (2007) BMC Evol. Biol. , vol.7 , pp. 214
    • Drummond, A.1    Rambaut, A.2
  • 20
    • 15944429015 scopus 로고    scopus 로고
    • Diversification of the forest beetle genus Tarphius on the Canary Islands, and the evolutionary origins of island endemics
    • Emerson B.C., and Oromí P. Diversification of the forest beetle genus Tarphius on the Canary Islands, and the evolutionary origins of island endemics. Evolution 59 (2005) 586-598
    • (2005) Evolution , vol.59 , pp. 586-598
    • Emerson, B.C.1    Oromí, P.2
  • 21
    • 0034510442 scopus 로고    scopus 로고
    • Interpreting colonization of the Calathus (Coleoptera: Carabidae) on the Canary Islands and Madeira through the application of the parametric bootstrap
    • Emerson B.C., Oromí P., and Hewitt G.M. Interpreting colonization of the Calathus (Coleoptera: Carabidae) on the Canary Islands and Madeira through the application of the parametric bootstrap. Evolution 54 (2000) 2081-2090
    • (2000) Evolution , vol.54 , pp. 2081-2090
    • Emerson, B.C.1    Oromí, P.2    Hewitt, G.M.3
  • 22
    • 0033910825 scopus 로고    scopus 로고
    • Colonization and diversification of the species Brachyderes rugatus (Coleoptera) on the Canary Islands: evidence from mitochondrial DNA COII gene sequences
    • Emerson B.C., Oromí P., and Hewitt G.M. Colonization and diversification of the species Brachyderes rugatus (Coleoptera) on the Canary Islands: evidence from mitochondrial DNA COII gene sequences. Evolution 54 (2000) 911-923
    • (2000) Evolution , vol.54 , pp. 911-923
    • Emerson, B.C.1    Oromí, P.2    Hewitt, G.M.3
  • 23
    • 0001901848 scopus 로고
    • The taxon pulse: a general pattern of lineage radiation and extinction among carabid beetles
    • Ball G.E. (Ed), Junk, Dordrecht
    • Erwin T.L. The taxon pulse: a general pattern of lineage radiation and extinction among carabid beetles. In: Ball G.E. (Ed). Taxonomy phylogeny and zoogeography of beetles and ants (1985), Junk, Dordrecht 437-472
    • (1985) Taxonomy phylogeny and zoogeography of beetles and ants , pp. 437-472
    • Erwin, T.L.1
  • 24
    • 0029468060 scopus 로고
    • Constructing a significance test for incongruence
    • Farris J.S., Kallersjo M., Kluge A.G., and Bult C. Constructing a significance test for incongruence. Syst. Biol. 44 (1995) 570-572
    • (1995) Syst. Biol. , vol.44 , pp. 570-572
    • Farris, J.S.1    Kallersjo, M.2    Kluge, A.G.3    Bult, C.4
  • 26
    • 0027616543 scopus 로고
    • Alignment-ambiguous nucleotide sites and the exclusion of systematic data
    • Gatesy J., Desalle R., and Wheeler W. Alignment-ambiguous nucleotide sites and the exclusion of systematic data. Mol. Phylogenet. Evol. 2 (1993) 152-157
    • (1993) Mol. Phylogenet. Evol. , vol.2 , pp. 152-157
    • Gatesy, J.1    Desalle, R.2    Wheeler, W.3
  • 27
    • 0032805771 scopus 로고    scopus 로고
    • Corroboration among data sets in simultaneous analysis: hidden support for phylogenetic relationships among higher level artiodactyl taxa
    • Gatesy J., O'Grady P., and Baker R.H. Corroboration among data sets in simultaneous analysis: hidden support for phylogenetic relationships among higher level artiodactyl taxa. Cladistics 15 (1999) 271-313
    • (1999) Cladistics , vol.15 , pp. 271-313
    • Gatesy, J.1    O'Grady, P.2    Baker, R.H.3
  • 28
    • 5044230709 scopus 로고    scopus 로고
    • A secondary structural model of the 28S rRNA expansion segments D2 and D3 from rootworms and related leaf beetles (Coleoptera: Chrysomelidae; Galerucinae)
    • Gillespie J., Cannone J., Gutell R., and Cognato A. A secondary structural model of the 28S rRNA expansion segments D2 and D3 from rootworms and related leaf beetles (Coleoptera: Chrysomelidae; Galerucinae). Insect Mol. Biol. 13 (2004) 495-518
    • (2004) Insect Mol. Biol. , vol.13 , pp. 495-518
    • Gillespie, J.1    Cannone, J.2    Gutell, R.3    Cognato, A.4
  • 29
    • 7444256051 scopus 로고    scopus 로고
    • Characterizing regions of ambiguous alignment caused by the expansion and contraction of hairpin-stem loops in ribosomal RNA molecules
    • Gillespie J.J. Characterizing regions of ambiguous alignment caused by the expansion and contraction of hairpin-stem loops in ribosomal RNA molecules. Mol. Phylogenet. Evol. 33 (2004) 936-943
    • (2004) Mol. Phylogenet. Evol. , vol.33 , pp. 936-943
    • Gillespie, J.J.1
  • 30
    • 0043071131 scopus 로고    scopus 로고
    • Stability in phylogenetic formulations and its relationship to nodal support
    • Giribet G. Stability in phylogenetic formulations and its relationship to nodal support. Syst. Biol. 52 (2003) 554-564
    • (2003) Syst. Biol. , vol.52 , pp. 554-564
    • Giribet, G.1
  • 32
    • 0033935083 scopus 로고    scopus 로고
    • A review of arthropod phylogeny: new data based on ribosomal DNA sequences and direct character optimization
    • Giribet G., and Ribera C. A review of arthropod phylogeny: new data based on ribosomal DNA sequences and direct character optimization. Cladistics 16 (2000) 204-231
    • (2000) Cladistics , vol.16 , pp. 204-231
    • Giribet, G.1    Ribera, C.2
  • 33
    • 2542421864 scopus 로고    scopus 로고
    • Implications for the early shield-stage evolution of Tenerife from K/Ar ages and magnetic stratigraphy
    • Guillou H., Carracedo J.C., Paris R., and Pérez Torrado F.J. Implications for the early shield-stage evolution of Tenerife from K/Ar ages and magnetic stratigraphy. Earth Planet. Sci. Lett. 222 (2004) 599-614
    • (2004) Earth Planet. Sci. Lett. , vol.222 , pp. 599-614
    • Guillou, H.1    Carracedo, J.C.2    Paris, R.3    Pérez Torrado, F.J.4
  • 34
    • 0343237775 scopus 로고    scopus 로고
    • The evolutionary history of the genus Timarcha (Coleoptera, Chrysomelidae) inferred from mitochondrial COII gene and partial 16S rDNA sequences
    • Gomez-Zurita J., Juan C., and Petitpierre E. The evolutionary history of the genus Timarcha (Coleoptera, Chrysomelidae) inferred from mitochondrial COII gene and partial 16S rDNA sequences. Mol. Phylogenet. Evol. 14 (2000) 304-317
    • (2000) Mol. Phylogenet. Evol. , vol.14 , pp. 304-317
    • Gomez-Zurita, J.1    Juan, C.2    Petitpierre, E.3
  • 36
    • 33750715554 scopus 로고    scopus 로고
    • Tribe Sphodrini
    • Löbl I., and Smetana A. (Eds), Apollo Books, Stenstrup
    • Hovorka O., and Sciaky R. Tribe Sphodrini. In: Löbl I., and Smetana A. (Eds). Catalogue of Palearctic Coleoptera (2003), Apollo Books, Stenstrup 1-819
    • (2003) Catalogue of Palearctic Coleoptera , pp. 1-819
    • Hovorka, O.1    Sciaky, R.2
  • 39
    • 0036787537 scopus 로고    scopus 로고
    • Elongation factor 1 alpha resolves the monophyly of the haplodiploid ambrosia beetles Xyleborini (Coleoptera: Curculionidae)
    • Jordal B.H. Elongation factor 1 alpha resolves the monophyly of the haplodiploid ambrosia beetles Xyleborini (Coleoptera: Curculionidae). Insect Mol. Biol. 11 (2002) 453-465
    • (2002) Insect Mol. Biol. , vol.11 , pp. 453-465
    • Jordal, B.H.1
  • 40
    • 37849008260 scopus 로고    scopus 로고
    • Secondary structure alignment and direct optimization of 28S rDNA sequences provide limited phylogenetic resolution in bark and ambrosia beetles (Curculionidae: Scolytinae)
    • Jordal B., Gillespie J.J., and Cognato A.I. Secondary structure alignment and direct optimization of 28S rDNA sequences provide limited phylogenetic resolution in bark and ambrosia beetles (Curculionidae: Scolytinae). Zool. Scr. 37 (2008) 43-56
    • (2008) Zool. Scr. , vol.37 , pp. 43-56
    • Jordal, B.1    Gillespie, J.J.2    Cognato, A.I.3
  • 41
    • 0029365329 scopus 로고
    • Use of ribosomal-RNA secondary structure in phylogenetic studies to identify homologous positions-an example of alignment and data presentation from the frogs
    • Kjer K.M. Use of ribosomal-RNA secondary structure in phylogenetic studies to identify homologous positions-an example of alignment and data presentation from the frogs. Mol. Phylogenet. Evol. 4 (1995) 314-330
    • (1995) Mol. Phylogenet. Evol. , vol.4 , pp. 314-330
    • Kjer, K.M.1
  • 42
    • 3242721251 scopus 로고    scopus 로고
    • Aligned 18S and insect phylogeny
    • Kjer K.M. Aligned 18S and insect phylogeny. Syst. Biol. 53 (2004) 506-514
    • (2004) Syst. Biol. , vol.53 , pp. 506-514
    • Kjer, K.M.1
  • 43
    • 34247577270 scopus 로고    scopus 로고
    • Opinions on multiple sequence alignment, and an empirical comparison of repeatability and accuracy between POY and structural alignment
    • Kjer K.M., Gillespie J.J., and Ober K.A. Opinions on multiple sequence alignment, and an empirical comparison of repeatability and accuracy between POY and structural alignment. Syst. Biol. 56 (2007) 133-146
    • (2007) Syst. Biol. , vol.56 , pp. 133-146
    • Kjer, K.M.1    Gillespie, J.J.2    Ober, K.A.3
  • 45
    • 33846869288 scopus 로고    scopus 로고
    • Multiple sequence alignment: in pursuit of homologous DNA positions
    • Kumar S., and Filipski A. Multiple sequence alignment: in pursuit of homologous DNA positions. Genome Res. 17 (2007) 127-135
    • (2007) Genome Res. , vol.17 , pp. 127-135
    • Kumar, S.1    Filipski, A.2
  • 46
    • 0035576060 scopus 로고    scopus 로고
    • Unalignable sequences and molecular evolution
    • Lee M.S.Y. Unalignable sequences and molecular evolution. Trends Ecol. Evol. 16 (2001) 681-685
    • (2001) Trends Ecol. Evol. , vol.16 , pp. 681-685
    • Lee, M.S.Y.1
  • 47
    • 57649220004 scopus 로고    scopus 로고
    • Liebherr, J.K., 1986. Cladistic analysis of North American Platynini and revision of the Agonum extensicolle species group (Coleoptera:Carabidae). University of California, Publ. Entomol., 106, X + 198.
    • Liebherr, J.K., 1986. Cladistic analysis of North American Platynini and revision of the Agonum extensicolle species group (Coleoptera:Carabidae). University of California, Publ. Entomol., 106, X + 198.
  • 48
    • 1442340284 scopus 로고    scopus 로고
    • How do insect nuclear and mitochondrial gene substitution pattern differ? Insights from Bayesian analyses of combined datasets
    • Lin C., and Danforth B.N. How do insect nuclear and mitochondrial gene substitution pattern differ? Insights from Bayesian analyses of combined datasets. Mol. Phylogenet. Evol. 30 (2004) 686-702
    • (2004) Mol. Phylogenet. Evol. , vol.30 , pp. 686-702
    • Lin, C.1    Danforth, B.N.2
  • 49
    • 34848880203 scopus 로고    scopus 로고
    • The impact of length-variable data and alignment criterion on the phylogeny of Decapodiformes (Mollusca: Cephalopoda)
    • Lindgren A.R., and Daly M. The impact of length-variable data and alignment criterion on the phylogeny of Decapodiformes (Mollusca: Cephalopoda). Cladistics 23 (2007) 464-476
    • (2007) Cladistics , vol.23 , pp. 464-476
    • Lindgren, A.R.1    Daly, M.2
  • 50
    • 0005242138 scopus 로고
    • On the elytral microsculpture of carabid beetles (Col. Carabidae)
    • Lindroth C.H. On the elytral microsculpture of carabid beetles (Col. Carabidae). Entomol. Scand. 5 (1974) 251-264
    • (1974) Entomol. Scand. , vol.5 , pp. 251-264
    • Lindroth, C.H.1
  • 51
    • 84977259757 scopus 로고
    • A revision of the genus Synuchus Gyllenhal (Coleoptera, Carabidae) in the widest sense, with notes on Pristosia and Calathus
    • Lindroth C.H. A revision of the genus Synuchus Gyllenhal (Coleoptera, Carabidae) in the widest sense, with notes on Pristosia and Calathus. Trans. Roy. Entomol. Soc. Lond. 108 (1956) 485-585
    • (1956) Trans. Roy. Entomol. Soc. Lond. , vol.108 , pp. 485-585
    • Lindroth, C.H.1
  • 52
    • 0026822397 scopus 로고
    • Evolution of the mitochondrial cytochrome oxidase II gene among 10 orders of insects
    • Liu H., and Beckenbach A.T. Evolution of the mitochondrial cytochrome oxidase II gene among 10 orders of insects. Mol. Phylogenet. Evol. 1 (1992) 41-52
    • (1992) Mol. Phylogenet. Evol. , vol.1 , pp. 41-52
    • Liu, H.1    Beckenbach, A.T.2
  • 54
    • 57649157655 scopus 로고    scopus 로고
    • Lorenz, W., 2005. A systematic list of extant ground beetles of the World (Coleoptera "Geadephaga": Trachypachidae and Carabidae Incl. Paussinae, Cicindelinae, Rhysodinae). Lorenz, W, Tutzing, Germany, 530 pp.
    • Lorenz, W., 2005. A systematic list of extant ground beetles of the World (Coleoptera "Geadephaga": Trachypachidae and Carabidae Incl. Paussinae, Cicindelinae, Rhysodinae). Lorenz, W, Tutzing, Germany, 530 pp.
  • 56
    • 0030209597 scopus 로고    scopus 로고
    • The insect cytochrome oxidase I gene: evolutionary patterns and conserved primers for phylogenetic studies
    • Lunt D.H., Zhang D.X., Szymura J.M., and Hewitt G.M. The insect cytochrome oxidase I gene: evolutionary patterns and conserved primers for phylogenetic studies. Insect Mol. Biol. 5 (1996) 153-165
    • (1996) Insect Mol. Biol. , vol.5 , pp. 153-165
    • Lunt, D.H.1    Zhang, D.X.2    Szymura, J.M.3    Hewitt, G.M.4
  • 58
    • 0001705679 scopus 로고    scopus 로고
    • Phylogeny of carabid beetles as inferred from 18S ribosomal DNA (coleoptera: Carabidae)
    • Maddison D.R., Baker M.D., and Ober K. Phylogeny of carabid beetles as inferred from 18S ribosomal DNA (coleoptera: Carabidae). Syst. Entomol. 24 (1999) 103-138
    • (1999) Syst. Entomol. , vol.24 , pp. 103-138
    • Maddison, D.R.1    Baker, M.D.2    Ober, K.3
  • 59
    • 0024940670 scopus 로고
    • Reconstructing character evolution on polytomous cladograms
    • Maddison W. Reconstructing character evolution on polytomous cladograms. Cladistics 5 (1989) 365-377
    • (1989) Cladistics , vol.5 , pp. 365-377
    • Maddison, W.1
  • 60
    • 0002485061 scopus 로고
    • Development and regional differentiation of the European vegetation during the Tertiary
    • Mai D.H. Development and regional differentiation of the European vegetation during the Tertiary. Plant Syst. Evol. 162 (1989) 79-91
    • (1989) Plant Syst. Evol. , vol.162 , pp. 79-91
    • Mai, D.H.1
  • 61
    • 33845446297 scopus 로고    scopus 로고
    • Accurate branch length estimation in partitioned Bayesian analyses requires accommodation of among-partition rate variation and attention to branch length priors
    • Marshall D.C., Simon C., and Buckley T.R. Accurate branch length estimation in partitioned Bayesian analyses requires accommodation of among-partition rate variation and attention to branch length priors. Syst. Biol. 55 (2006) 993-1003
    • (2006) Syst. Biol. , vol.55 , pp. 993-1003
    • Marshall, D.C.1    Simon, C.2    Buckley, T.R.3
  • 62
    • 14144251278 scopus 로고    scopus 로고
    • Phylogeny and molecular evolution of the tribe Harpalini (Coleoptera, Carabidae) inferred from mitochondrial cytochrome-oxidase I
    • Martinez-Navarro E., Galian J., and Serrano J. Phylogeny and molecular evolution of the tribe Harpalini (Coleoptera, Carabidae) inferred from mitochondrial cytochrome-oxidase I. Mol. Phylogenet. Evol. 35 (2005) 127-146
    • (2005) Mol. Phylogenet. Evol. , vol.35 , pp. 127-146
    • Martinez-Navarro, E.1    Galian, J.2    Serrano, J.3
  • 63
    • 37448999501 scopus 로고    scopus 로고
    • Typology of life cycles of ground beetles (Coleoptera, Carabidae) in Western Palaearctic
    • Matalin A.V. Typology of life cycles of ground beetles (Coleoptera, Carabidae) in Western Palaearctic. Ent. Rev. 87 (2007) 947-972
    • (2007) Ent. Rev. , vol.87 , pp. 947-972
    • Matalin, A.V.1
  • 64
    • 0000147290 scopus 로고
    • The implications of congruence in Menidia
    • Mickevich M.F., and Farris J.S. The implications of congruence in Menidia. Syst. Zool. 30 (1981) 351-370
    • (1981) Syst. Zool. , vol.30 , pp. 351-370
    • Mickevich, M.F.1    Farris, J.S.2
  • 65
    • 0030934592 scopus 로고    scopus 로고
    • Effects of nucleotide sequence alignment on phylogeny estimation: A case study of 18S rDNAs of Apicomplexa
    • Morrison D.A., and Ellis J.T. Effects of nucleotide sequence alignment on phylogeny estimation: A case study of 18S rDNAs of Apicomplexa. Mol. Biol. Evol. 14 (1997) 428-441
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 428-441
    • Morrison, D.A.1    Ellis, J.T.2
  • 67
    • 0036038038 scopus 로고    scopus 로고
    • Phylogenetic relationships of the carabid subfamily Harpalinae (Coleoptera) based on molecular sequence data
    • Ober K. Phylogenetic relationships of the carabid subfamily Harpalinae (Coleoptera) based on molecular sequence data. Mol. Phylogenet. Evol. 26 (2002) 228-248
    • (2002) Mol. Phylogenet. Evol. , vol.26 , pp. 228-248
    • Ober, K.1
  • 68
    • 0142167519 scopus 로고    scopus 로고
    • The problem with "the Paleoptera problem:" sense and sensitivity
    • Ogden T.H., and Whiting M.F. The problem with "the Paleoptera problem:" sense and sensitivity. Cladistics 19 (2003) 432-442
    • (2003) Cladistics , vol.19 , pp. 432-442
    • Ogden, T.H.1    Whiting, M.F.2
  • 69
    • 57649210733 scopus 로고
    • Composition and ecological characteristics of Mesozoic coleoptera
    • Arnol'di L., Jerikin V.V., Nikritin L.M., and Ponomarenko A.G. (Eds), Smithsonian Institution and the National Science Foundation, Washington, DC
    • Ponomarenko A.G. Composition and ecological characteristics of Mesozoic coleoptera. In: Arnol'di L., Jerikin V.V., Nikritin L.M., and Ponomarenko A.G. (Eds). Mesozoic Coleoptera (1992), Smithsonian Institution and the National Science Foundation, Washington, DC 5-142
    • (1992) Mesozoic Coleoptera , pp. 5-142
    • Ponomarenko, A.G.1
  • 70
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada D., and Crandall K.A. MODELTEST: Testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 71
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
    • Posada D., and Buckley T. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Syst. Biol. 53 (2004) 793-808
    • (2004) Syst. Biol. , vol.53 , pp. 793-808
    • Posada, D.1    Buckley, T.2
  • 72
    • 0344588818 scopus 로고    scopus 로고
    • Low substitution rates in mitochondrial DNA in Mediterranean carabid beetles
    • Prüser F., and Mossakowski D. Low substitution rates in mitochondrial DNA in Mediterranean carabid beetles. Insect Mol. Biol. 7 (1998) 121-128
    • (1998) Insect Mol. Biol. , vol.7 , pp. 121-128
    • Prüser, F.1    Mossakowski, D.2
  • 73
    • 57649233577 scopus 로고    scopus 로고
    • Rambaut, A., Drummond, A., 2008. BEAUti, Bayesian Evolutionary Analysis Utility, version 1.4.7.
    • Rambaut, A., Drummond, A., 2008. BEAUti, Bayesian Evolutionary Analysis Utility, version 1.4.7.
  • 74
    • 57649173599 scopus 로고    scopus 로고
    • Rambaut, A., Drummond, A., 2008a. TreeAnnotator, version 1.4.7.
    • Rambaut, A., Drummond, A., 2008a. TreeAnnotator, version 1.4.7.
  • 75
    • 57649155727 scopus 로고    scopus 로고
    • Rambaut, A., 2008. FigTree, Tree Figure Drawing Tool, version 1.1.1.
    • Rambaut, A., 2008. FigTree, Tree Figure Drawing Tool, version 1.1.1.
  • 76
    • 57649217849 scopus 로고    scopus 로고
    • Rambaut, A., Drummond, A., 2007. LogCombiner, version 1.4.7.
    • Rambaut, A., Drummond, A., 2007. LogCombiner, version 1.4.7.
  • 77
    • 57649149318 scopus 로고    scopus 로고
    • Rambaut, A., Drummond, A., 2005. Tracer. MCMC Trace File Analyser, version 1.3.
    • Rambaut, A., Drummond, A., 2005. Tracer. MCMC Trace File Analyser, version 1.3.
  • 78
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 79
    • 33750738222 scopus 로고    scopus 로고
    • Molecular phylogeny and systematics of Calathus Bonelli (Coleoptera: Carabidae: Sphodrini) based on mitochondrial cox1-cox2 sequences
    • Ruiz C., and Serrano J. Molecular phylogeny and systematics of Calathus Bonelli (Coleoptera: Carabidae: Sphodrini) based on mitochondrial cox1-cox2 sequences. Entomol. Fenn. 17 (2006) 214-220
    • (2006) Entomol. Fenn. , vol.17 , pp. 214-220
    • Ruiz, C.1    Serrano, J.2
  • 80
    • 0034619801 scopus 로고    scopus 로고
    • Evolutionary assembly of the conifer fauna: distinguishing ancient from recent associations in bark beetles
    • Sequeira A.S., Normark B.B., and Farrell B.D. Evolutionary assembly of the conifer fauna: distinguishing ancient from recent associations in bark beetles. Proc. Roy. Soc. Lond. B 267 (2000) 2359-2366
    • (2000) Proc. Roy. Soc. Lond. B , vol.267 , pp. 2359-2366
    • Sequeira, A.S.1    Normark, B.B.2    Farrell, B.D.3
  • 81
    • 0035527399 scopus 로고    scopus 로고
    • Sequence alignment of 18S ribosomal RNA and the basal relationships of Adephagan beetles: evidence for monophyly of aquatic families and the placement of Trachypachidae
    • Shull V.L., Vogler A.P., Baker M.D., Maddison D.R., and Hammond P.M. Sequence alignment of 18S ribosomal RNA and the basal relationships of Adephagan beetles: evidence for monophyly of aquatic families and the placement of Trachypachidae. Syst. Biol. 50 (2001) 945-969
    • (2001) Syst. Biol. , vol.50 , pp. 945-969
    • Shull, V.L.1    Vogler, A.P.2    Baker, M.D.3    Maddison, D.R.4    Hammond, P.M.5
  • 82
    • 57649155728 scopus 로고    scopus 로고
    • Sorenson, M.D., Franzosa, E.A., 2007. TreeRot, version 3.
    • Sorenson, M.D., Franzosa, E.A., 2007. TreeRot, version 3.
  • 83
    • 57649220003 scopus 로고    scopus 로고
    • *and Other Methods).
    • *and Other Methods).
  • 84
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (2007) 1596-1599
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 85
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 86
    • 0028878618 scopus 로고
    • Sequence alignment, parameter sensitivity and the phylogenetic analysis molecular data
    • Wheeler W.C. Sequence alignment, parameter sensitivity and the phylogenetic analysis molecular data. Syst. Biol. 44 (1995) 321-331
    • (1995) Syst. Biol. , vol.44 , pp. 321-331
    • Wheeler, W.C.1
  • 87
    • 0029265578 scopus 로고
    • Elision: a method for accommodating multiple molecular sequence alignments with alignment-ambiguous sites
    • Wheeler W.C., Gatesy J., and Desalle R. Elision: a method for accommodating multiple molecular sequence alignments with alignment-ambiguous sites. Mol. Phylogenet. Evol. 4 (1995) 1-9
    • (1995) Mol. Phylogenet. Evol. , vol.4 , pp. 1-9
    • Wheeler, W.C.1    Gatesy, J.2    Desalle, R.3
  • 88
    • 0000910719 scopus 로고    scopus 로고
    • The phylogeny of the extant Chelicerate orders
    • Wheeler W.C., and Hayashi C.Y. The phylogeny of the extant Chelicerate orders. Cladistics 14 (1998) 173-192
    • (1998) Cladistics , vol.14 , pp. 173-192
    • Wheeler, W.C.1    Hayashi, C.Y.2
  • 89
    • 40349084441 scopus 로고    scopus 로고
    • Ancient rapid radiations of insects: challenges for phylogenetic analysis
    • Whitfield J.B., and Kjer K.M. Ancient rapid radiations of insects: challenges for phylogenetic analysis. Annu. Rev. Entomol. 53 (2008) 449-472
    • (2008) Annu. Rev. Entomol. , vol.53 , pp. 449-472
    • Whitfield, J.B.1    Kjer, K.M.2
  • 90
  • 91
    • 0031084115 scopus 로고    scopus 로고
    • The Strepsiptera problem: Phylogeny of the Holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology
    • Whiting M.F., Carpenter J.C., Wheeler Q.D., and Wheeler W.C. The Strepsiptera problem: Phylogeny of the Holometabolous insect orders inferred from 18S and 28S ribosomal DNA sequences and morphology. Syst. Biol. 46 (1997) 1-68
    • (1997) Syst. Biol. , vol.46 , pp. 1-68
    • Whiting, M.F.1    Carpenter, J.C.2    Wheeler, Q.D.3    Wheeler, W.C.4
  • 92
    • 0038487293 scopus 로고    scopus 로고
    • 18S ribosomal RNA and tetrapod phylogeny
    • Xia X.H., Xie Z., and Kjer K.M. 18S ribosomal RNA and tetrapod phylogeny. Syst. Biol. 52 (2003) 283-295
    • (2003) Syst. Biol. , vol.52 , pp. 283-295
    • Xia, X.H.1    Xie, Z.2    Kjer, K.M.3
  • 93
    • 0042121256 scopus 로고    scopus 로고
    • Mfold Web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold Web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.