메뉴 건너뛰기




Volumn 33, Issue 1, 2009, Pages 98-108

Systemic approaches to biodegradation

Author keywords

Biodegradation; Biological databases; Bioremediation; Metabolic networks; Systems biology

Indexed keywords

BACTERIAL ENZYME;

EID: 57549083624     PISSN: 01686445     EISSN: 15746976     Source Type: Journal    
DOI: 10.1111/j.1574-6976.2008.00143.x     Document Type: Review
Times cited : (49)

References (86)
  • 2
    • 0034721164 scopus 로고    scopus 로고
    • Error and attack tolerance of complex networks
    • Albert R, Jeong H Barabasi AL (2000) Error and attack tolerance of complex networks. Nature 406 : 378 382.
    • (2000) Nature , vol.406 , pp. 378-382
    • Albert, R.1    Jeong, H.2    Barabasi, A.L.3
  • 4
    • 0036303685 scopus 로고    scopus 로고
    • Evolution of enzymes in metabolism: A network perspective
    • Alves R, Chaleil RA Sternberg MJ (2002) Evolution of enzymes in metabolism: a network perspective. J Mol Biol 320 : 751 770.
    • (2002) J Mol Biol , vol.320 , pp. 751-770
    • Alves, R.1    Chaleil, R.A.2    Sternberg, M.J.3
  • 5
    • 23344438932 scopus 로고    scopus 로고
    • Scale-freeness and biological networks
    • Arita M (2005) Scale-freeness and biological networks. J Biochem 138 : 1 4.
    • (2005) J Biochem , vol.138 , pp. 1-4
    • Arita, M.1
  • 7
    • 0038513959 scopus 로고    scopus 로고
    • Scale-free networks
    • Barabasi AL Bonabeau E (2003) Scale-free networks. Sci Am 288 : 60 69.
    • (2003) Sci Am , vol.288 , pp. 60-69
    • Barabasi, A.L.1    Bonabeau, E.2
  • 8
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding the cell's functional organization
    • Barabasi AL Oltvai ZN (2004) Network biology: understanding the cell's functional organization. Nat Rev Genet 5 : 101 113.
    • (2004) Nat Rev Genet , vol.5 , pp. 101-113
    • Barabasi, A.L.1    Oltvai, Z.N.2
  • 9
    • 31444439441 scopus 로고    scopus 로고
    • DDT and human health
    • Beard J (2006) DDT and human health. Sci Total Environ 355 : 78 89.
    • (2006) Sci Total Environ , vol.355 , pp. 78-89
    • Beard, J.1
  • 13
    • 0031025405 scopus 로고    scopus 로고
    • New metabolites in the degradation of fluorene by Arthrobacter sp. strain F101
    • Casellas M, Grifoll M, Bayona JM Solanas AM (1997) New metabolites in the degradation of fluorene by Arthrobacter sp. strain F101. Appl Environ Microbiol 63 : 819 826.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 819-826
    • Casellas, M.1    Grifoll, M.2    Bayona, J.M.3    Solanas, A.M.4
  • 14
    • 13444302680 scopus 로고    scopus 로고
    • Promoters in the environment: Transcriptional regulation in its natural context
    • Cases I de Lorenzo V (2005a) Promoters in the environment: transcriptional regulation in its natural context. Nat Rev Microbiol 3 : 105 118.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 105-118
    • Cases, I.1    De Lorenzo, V.2
  • 15
    • 24944583078 scopus 로고    scopus 로고
    • Genetically modified organisms for the environment: Stories of success and failure and what we have learned from them
    • Cases I de Lorenzo V (2005b) Genetically modified organisms for the environment: stories of success and failure and what we have learned from them. Int Microbiol 8 : 213 222.
    • (2005) Int Microbiol , vol.8 , pp. 213-222
    • Cases, I.1    De Lorenzo, V.2
  • 16
    • 0034213801 scopus 로고    scopus 로고
    • Evolution of a metabolic pathway for degradation of a toxic xenobiotic: The patchwork approach
    • Copley SD (2000) Evolution of a metabolic pathway for degradation of a toxic xenobiotic: the patchwork approach. Trends Biochem Sci 25 : 261 265.
    • (2000) Trends Biochem Sci , vol.25 , pp. 261-265
    • Copley, S.D.1
  • 17
    • 0037396292 scopus 로고    scopus 로고
    • Enzymes with extra talents: Moonlighting functions and catalytic promiscuity
    • Copley SD (2003) Enzymes with extra talents: moonlighting functions and catalytic promiscuity. Curr Opin Chem Biol 7 : 265 272.
    • (2003) Curr Opin Chem Biol , vol.7 , pp. 265-272
    • Copley, S.D.1
  • 19
    • 0033861767 scopus 로고    scopus 로고
    • Effect of dissemination of 2,4-dichlorophenoxyacetic acid (2,4-D) degradation plasmids on 2,4-D degradation and on bacterial community structure in two different soil horizons
    • Dejonghe W, Goris J, El Fantroussi S, Hofte M, De Vos P, Verstraete W Top EM (2000) Effect of dissemination of 2,4-dichlorophenoxyacetic acid (2,4-D) degradation plasmids on 2,4-D degradation and on bacterial community structure in two different soil horizons. Appl Environ Microbiol 66 : 3297 3304.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 3297-3304
    • Dejonghe, W.1    Goris, J.2    El Fantroussi, S.3    Hofte, M.4    De Vos, P.5    Verstraete, W.6    Top, E.M.7
  • 21
    • 16544381551 scopus 로고    scopus 로고
    • Bacterial degradation of aromatic pollutants: A paradigm of metabolic versatility
    • Diaz E (2004) Bacterial degradation of aromatic pollutants: a paradigm of metabolic versatility. Int Microbiol 7 : 173 180.
    • (2004) Int Microbiol , vol.7 , pp. 173-180
    • Diaz, E.1
  • 22
    • 0027978161 scopus 로고
    • Universal barrier to lateral spread of specific genes among microorganisms
    • Diaz E, Munthali M, de Lorenzo V Timmis KN (1994) Universal barrier to lateral spread of specific genes among microorganisms. Mol Microbiol 13 : 855 861.
    • (1994) Mol Microbiol , vol.13 , pp. 855-861
    • Diaz, E.1    Munthali, M.2    De Lorenzo, V.3    Timmis, K.N.4
  • 23
    • 33644877427 scopus 로고    scopus 로고
    • The University of Minnesota Biocatalysis/Biodegradation Database: The first decade
    • Ellis LB, Roe D Wackett LP (2006) The University of Minnesota Biocatalysis/Biodegradation Database: the first decade. Nucleic Acids Res 34 : D517 D521.
    • (2006) Nucleic Acids Res , vol.34
    • Ellis, L.B.1    Roe, D.2    Wackett, L.P.3
  • 24
    • 48449089104 scopus 로고    scopus 로고
    • The University of Minnesota pathway prediction system: Predicting metabolic logic
    • Ellis LB, Gao J, Fenner K Wackett LP (2008) The University of Minnesota pathway prediction system: predicting metabolic logic. Nucleic Acids Res 36 : W427 W432.
    • (2008) Nucleic Acids Res , vol.36
    • Ellis, L.B.1    Gao, J.2    Fenner, K.3    Wackett, L.P.4
  • 25
    • 45149111660 scopus 로고    scopus 로고
    • The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli
    • Feist AM Palsson BO (2008) The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli. Nat Biotechnol 26 : 659 667.
    • (2008) Nat Biotechnol , vol.26 , pp. 659-667
    • Feist, A.M.1    Palsson, B.O.2
  • 27
    • 24944526639 scopus 로고    scopus 로고
    • Exploring the microbial biodegradation and biotransformation gene pool
    • Galvao TC, Mohn WW de Lorenzo V (2005) Exploring the microbial biodegradation and biotransformation gene pool. Trends Biotechnol 23 : 497 506.
    • (2005) Trends Biotechnol , vol.23 , pp. 497-506
    • Galvao, T.C.1    Mohn, W.W.2    De Lorenzo, V.3
  • 28
    • 53149116351 scopus 로고    scopus 로고
    • Tracing explosives in soil with transcriptional regulators of Pseudomonas putida evolved for responding to nitrotoluenes
    • Garmendia U, Heras ADL, Galvão TC Lorenzo VD (2008) Tracing explosives in soil with transcriptional regulators of Pseudomonas putida evolved for responding to nitrotoluenes. Microbial Biotechnology 1 : 236 246.
    • (2008) Microbial Biotechnology , vol.1 , pp. 236-246
    • Garmendia, U.1    Heras, A.D.L.2    Galvão, T.C.3    Lorenzo, V.D.4
  • 29
    • 34249940105 scopus 로고    scopus 로고
    • The environmental fate of organic pollutants through the global microbial metabolism
    • Gomez MJ, Pazos F, Guijarro FJ, de Lorenzo V Valencia A (2007) The environmental fate of organic pollutants through the global microbial metabolism. Mol Syst Biol 3 : 114.
    • (2007) Mol Syst Biol , vol.3 , pp. 114
    • Gomez, M.J.1    Pazos, F.2    Guijarro, F.J.3    De Lorenzo, V.4    Valencia, A.5
  • 30
    • 0001260894 scopus 로고
    • On the evolution of biochemical syntheses
    • Horowitz NH (1945) On the evolution of biochemical syntheses. P Natl Acad Sci USA 31 : 153 157.
    • (1945) P Natl Acad Sci USA , vol.31 , pp. 153-157
    • Horowitz, N.H.1
  • 31
    • 0001851565 scopus 로고
    • The evolution of biochemical synthesis: Retrospect and prospect
    • Brison, V.V.H., ed), pp. Academic Press, New York.
    • Horowitz NH (1965) The evolution of biochemical synthesis: retrospect and prospect. Evolving Genes and Proteins (Brison VVH, ed), pp. 15 23. Academic Press, New York.
    • (1965) Evolving Genes and Proteins , pp. 15-23
    • Horowitz, N.H.1
  • 32
    • 0033940941 scopus 로고    scopus 로고
    • Gene and context: Integrative approaches to genome analysis
    • Huynen MA Snel B (2000) Gene and context: integrative approaches to genome analysis. Adv Protein Chem 54 : 345 379.
    • (2000) Adv Protein Chem , vol.54 , pp. 345-379
    • Huynen, M.A.1    Snel, B.2
  • 33
    • 0017272554 scopus 로고
    • Enzyme recruitment in evolution of new function
    • Jensen RA (1976) Enzyme recruitment in evolution of new function. Annu Rev Microbiol 30 : 409 425.
    • (1976) Annu Rev Microbiol , vol.30 , pp. 409-425
    • Jensen, R.A.1
  • 37
    • 33744473304 scopus 로고    scopus 로고
    • How scale-free are biological networks
    • Khanin R Wit E (2006) How scale-free are biological networks. J Comput Biol 13 : 810 818.
    • (2006) J Comput Biol , vol.13 , pp. 810-818
    • Khanin, R.1    Wit, E.2
  • 40
    • 0024339112 scopus 로고
    • Genetic engineering of bacteria from managed and natural habitats
    • Lindow SE, Panopoulos NJ McFarland BL (1989) Genetic engineering of bacteria from managed and natural habitats. Science 244 : 1300 1307.
    • (1989) Science , vol.244 , pp. 1300-1307
    • Lindow, S.E.1    Panopoulos, N.J.2    McFarland, B.L.3
  • 41
    • 0034963502 scopus 로고    scopus 로고
    • Enzymes and operons mediating xenobiotic degradation in bacteria
    • Mishra V, Lal R Srinivasan S (2001) Enzymes and operons mediating xenobiotic degradation in bacteria. Crit Rev Microbiol 27 : 133 166.
    • (2001) Crit Rev Microbiol , vol.27 , pp. 133-166
    • Mishra, V.1    Lal, R.2    Srinivasan, S.3
  • 43
    • 33846016960 scopus 로고    scopus 로고
    • Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1
    • Mongodin EF, Shapir N, Daugherty SC et al 2006) Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1. PLoS Genet 2 : e214.
    • (2006) PLoS Genet , vol.2
    • Mongodin, E.F.1    Shapir, N.2    Daugherty, S.C.3    Al, E.4
  • 44
    • 33947494924 scopus 로고    scopus 로고
    • Oxford University Press, New York.
    • Noble D (2006) The Music of Life. Oxford University Press, New York.
    • (2006) The Music of Life.
    • Noble, D.1
  • 45
    • 33845383312 scopus 로고    scopus 로고
    • A targeted real-time PCR assay for studying naphthalene degradation in the environment
    • Nyyssonen M, Piskonen R Itavaara M (2006) A targeted real-time PCR assay for studying naphthalene degradation in the environment. Microb Ecol 52 : 533 543.
    • (2006) Microb Ecol , vol.52 , pp. 533-543
    • Nyyssonen, M.1    Piskonen, R.2    Itavaara, M.3
  • 46
    • 37549018487 scopus 로고    scopus 로고
    • Environmental variability and modularity of bacterial metabolic networks
    • Parter M, Kashtan N Alon U (2007) Environmental variability and modularity of bacterial metabolic networks. BMC Evol Biol 7 : 169.
    • (2007) BMC Evol Biol , vol.7 , pp. 169
    • Parter, M.1    Kashtan, N.2    Alon, U.3
  • 47
    • 0242522894 scopus 로고    scopus 로고
    • The organization of the microbial biodegradation network from a systems-biology perspective
    • Pazos F, Valencia A De Lorenzo V (2003) The organization of the microbial biodegradation network from a systems-biology perspective. EMBO Rep 4 : 994 999.
    • (2003) EMBO Rep , vol.4 , pp. 994-999
    • Pazos, F.1    Valencia, A.2    De Lorenzo, V.3
  • 49
    • 0033108071 scopus 로고    scopus 로고
    • Towards elucidation of microbial community metabolic pathways: Unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry
    • Pelz O, Tesar M, Wittich RM, Moore ER, Timmis KN Abraham WR (1999) Towards elucidation of microbial community metabolic pathways: unravelling the network of carbon sharing in a pollutant-degrading bacterial consortium by immunocapture and isotopic ratio mass spectrometry. Environ Microbiol 1 : 167 174.
    • (1999) Environ Microbiol , vol.1 , pp. 167-174
    • Pelz, O.1    Tesar, M.2    Wittich, R.M.3    Moore, E.R.4    Timmis, K.N.5    Abraham, W.R.6
  • 50
    • 2942561975 scopus 로고    scopus 로고
    • Genomic and mechanistic insights into the biodegradation of organic pollutants
    • Pieper DH, Martins dos Santos VA Golyshin PN (2004) Genomic and mechanistic insights into the biodegradation of organic pollutants. Curr Opin Biotech 15 : 215 224.
    • (2004) Curr Opin Biotech , vol.15 , pp. 215-224
    • Pieper, D.H.1    Martins Dos Santos, V.A.2    Golyshin, P.N.3
  • 51
    • 0023628269 scopus 로고
    • Experimental evolution of catabolic pathways of bacteria
    • Ramos JL Timmis KN (1987) Experimental evolution of catabolic pathways of bacteria. Microbiol Sci 4 : 228 237.
    • (1987) Microbiol Sci , vol.4 , pp. 228-237
    • Ramos, J.L.1    Timmis, K.N.2
  • 52
    • 0023443646 scopus 로고
    • Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas
    • Ramos JL, Mermod N Timmis KN (1987) Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas. Mol Microbiol 1 : 293 300.
    • (1987) Mol Microbiol , vol.1 , pp. 293-300
    • Ramos, J.L.1    Mermod, N.2    Timmis, K.N.3
  • 55
    • 0031756487 scopus 로고    scopus 로고
    • Development of hybrid strains for the mineralization of chloroaromatics by patchwork assembly
    • Reineke W (1998) Development of hybrid strains for the mineralization of chloroaromatics by patchwork assembly. Annu Rev Microbiol 52 : 287 331.
    • (1998) Annu Rev Microbiol , vol.52 , pp. 287-331
    • Reineke, W.1
  • 56
    • 3242773890 scopus 로고    scopus 로고
    • Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays
    • Rhee SK, Liu X, Wu L, Chong SC, Wan X Zhou J (2004) Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Appl Environ Microbiol 70 : 4303 4317.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4303-4317
    • Rhee, S.K.1    Liu, X.2    Wu, L.3    Chong, S.C.4    Wan, X.5    Zhou, J.6
  • 57
    • 0036600740 scopus 로고    scopus 로고
    • Pathway evolution, structurally speaking
    • Rison SC Thornton JM (2002) Pathway evolution, structurally speaking. Curr Opin Struc Biol 12 : 374 382.
    • (2002) Curr Opin Struc Biol , vol.12 , pp. 374-382
    • Rison, S.C.1    Thornton, J.M.2
  • 58
    • 0023644204 scopus 로고
    • Assemblage of ortho cleavage route for simultaneous degradation of chloro- and methylaromatics
    • Rojo F, Pieper DH, Engesser KH, Knackmuss HJ Timmis KN (1987) Assemblage of ortho cleavage route for simultaneous degradation of chloro- and methylaromatics. Science 238 : 1395 1398.
    • (1987) Science , vol.238 , pp. 1395-1398
    • Rojo, F.1    Pieper, D.H.2    Engesser, K.H.3    Knackmuss, H.J.4    Timmis, K.N.5
  • 59
    • 0002739644 scopus 로고    scopus 로고
    • Bioremediation of petroleum contamination
    • Crawford, R. Crawford, D., eds), pp. Cambridge University Press, Cambridge.
    • Rosenberg E Zon E (1996) Bioremediation of petroleum contamination. Bioremediation. Principles and Applications (Crawford R Crawford D, eds), pp. 100 124. Cambridge University Press, Cambridge.
    • (1996) Bioremediation. Principles and Applications , pp. 100-124
    • Rosenberg, E.1    Zon, E.2
  • 60
    • 34247587012 scopus 로고    scopus 로고
    • Genetics. Getting closer to the whole picture
    • Sauer U, Heinemann M Zamboni N (2007) Genetics. Getting closer to the whole picture. Science 316 : 550 551.
    • (2007) Science , vol.316 , pp. 550-551
    • Sauer, U.1    Heinemann, M.2    Zamboni, N.3
  • 61
    • 0034029016 scopus 로고    scopus 로고
    • Field applications of genetically engineered microorganisms for bioremediation processes
    • Sayler GS Ripp S (2000) Field applications of genetically engineered microorganisms for bioremediation processes. Curr Opin Biotech 11 : 286 289.
    • (2000) Curr Opin Biotech , vol.11 , pp. 286-289
    • Sayler, G.S.1    Ripp, S.2
  • 63
    • 33747043510 scopus 로고    scopus 로고
    • Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
    • Schneiker S, Martins dos Santos VA, Bartels D et al 2006) Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis. Nat Biotechnol 24 : 997 1004.
    • (2006) Nat Biotechnol , vol.24 , pp. 997-1004
    • Schneiker, S.1    Martins Dos Santos, V.A.2    Bartels, D.3    Al, E.4
  • 64
    • 0028882064 scopus 로고
    • Degradation of chlorobiphenyls catalyzed by the bph-encoded biphenyl-2,3-dioxygenase and biphenyl-2,3-dihydrodiol-2,3-dehydrogenase of Pseudomonas sp. LB400
    • Seeger M, Timmis KN Hofer B (1995) Degradation of chlorobiphenyls catalyzed by the bph-encoded biphenyl-2,3-dioxygenase and biphenyl-2,3- dihydrodiol-2,3-dehydrogenase of Pseudomonas sp. LB400. FEMS Microbiol Lett 133 : 259 264.
    • (1995) FEMS Microbiol Lett , vol.133 , pp. 259-264
    • Seeger, M.1    Timmis, K.N.2    Hofer, B.3
  • 66
    • 0034547802 scopus 로고    scopus 로고
    • Field-scale remediation of atrazine-contaminated soil using recombinant Escherichia coli expressing atrazine chlorohydrolase
    • Strong LC, McTavish H, Sadowsky MJ Wackett LP (2000) Field-scale remediation of atrazine-contaminated soil using recombinant Escherichia coli expressing atrazine chlorohydrolase. Environ Microbiol 2 : 91 98.
    • (2000) Environ Microbiol , vol.2 , pp. 91-98
    • Strong, L.C.1    McTavish, H.2    Sadowsky, M.J.3    Wackett, L.P.4
  • 67
    • 34247599899 scopus 로고    scopus 로고
    • The Prestige oil spill and its economic impact on the Galician fishing sector
    • Suris-Regueiro JC, Garza-Gil MD Varela-Lafuente MM (2007) The Prestige oil spill and its economic impact on the Galician fishing sector. Disasters 31 : 201 215.
    • (2007) Disasters , vol.31 , pp. 201-215
    • Suris-Regueiro, J.C.1    Garza-Gil, M.D.2    Varela-Lafuente, M.M.3
  • 68
    • 34548838884 scopus 로고    scopus 로고
    • Modular organization in the reductive evolution of protein-protein interaction networks
    • Tamames J, Moya A Valencia A (2007) Modular organization in the reductive evolution of protein-protein interaction networks. Genome Biol 8 : R94.
    • (2007) Genome Biol , vol.8
    • Tamames, J.1    Moya, A.2    Valencia, A.3
  • 70
    • 0035943351 scopus 로고    scopus 로고
    • The evolution and structural anatomy of the small molecule metabolic pathways in Escherichia coli
    • Teichmann SA, Rison SC, Thornton JM, Riley M, Gough J Chothia C (2001b) The evolution and structural anatomy of the small molecule metabolic pathways in Escherichia coli. J Mol Biol 311 : 693 708.
    • (2001) J Mol Biol , vol.311 , pp. 693-708
    • Teichmann, S.A.1    Rison, S.C.2    Thornton, J.M.3    Riley, M.4    Gough, J.5    Chothia, C.6
  • 71
    • 0032795933 scopus 로고    scopus 로고
    • Bacteria designed for bioremediation
    • Timmis KN Pieper DH (1999) Bacteria designed for bioremediation. Trends Biotechnol 17 : 200 204.
    • (1999) Trends Biotechnol , vol.17 , pp. 200-204
    • Timmis, K.N.1    Pieper, D.H.2
  • 72
    • 0036270789 scopus 로고    scopus 로고
    • Microbial diversity and function in soil: From genes to ecosystems
    • Torsvik V Ovreas L (2002) Microbial diversity and function in soil: from genes to ecosystems. Curr Opin Microbiol 5 : 240 245.
    • (2002) Curr Opin Microbiol , vol.5 , pp. 240-245
    • Torsvik, V.1    Ovreas, L.2
  • 73
    • 0037052493 scopus 로고    scopus 로고
    • Prokaryotic diversity - Magnitude, dynamics, and controlling factors
    • Torsvik V, Ovreas L Thingstad TF (2002) Prokaryotic diversity - magnitude, dynamics, and controlling factors. Science 296 : 1064 1066.
    • (2002) Science , vol.296 , pp. 1064-1066
    • Torsvik, V.1    Ovreas, L.2    Thingstad, T.F.3
  • 75
    • 4544275675 scopus 로고    scopus 로고
    • Bacterial transcriptional regulators for degradation pathways of aromatic compounds
    • Tropel D van der Meer JR (2004) Bacterial transcriptional regulators for degradation pathways of aromatic compounds. Microbiol Mol Biol R 68 : 474 500.
    • (2004) Microbiol Mol Biol R , vol.68 , pp. 474-500
    • Tropel, D.1    Van Der Meer, J.R.2
  • 77
    • 33644837639 scopus 로고    scopus 로고
    • The m-xylene biodegradation capacity of Pseudomonas putida mt-2 is submitted to adaptation to abiotic stresses: Evidence from expression profiling of xyl genes
    • Velazquez F, de Lorenzo V Valls M (2006) The m-xylene biodegradation capacity of Pseudomonas putida mt-2 is submitted to adaptation to abiotic stresses: evidence from expression profiling of xyl genes. Environ Microbiol 8 : 591 602.
    • (2006) Environ Microbiol , vol.8 , pp. 591-602
    • Velazquez, F.1    De Lorenzo, V.2    Valls, M.3
  • 78
    • 34648819246 scopus 로고    scopus 로고
    • The potential of metabolomics tools in bioremediation studies
    • Villas-Boas SG Bruheim P (2007) The potential of metabolomics tools in bioremediation studies. Omics 11 : 305 313.
    • (2007) Omics , vol.11 , pp. 305-313
    • Villas-Boas, S.G.1    Bruheim, P.2
  • 79
    • 4744339316 scopus 로고    scopus 로고
    • Evolution of enzymes for the metabolism of new chemical inputs into the environment
    • Wackett LP (2004a) Evolution of enzymes for the metabolism of new chemical inputs into the environment. J Biol Chem 279 : 41259 41262.
    • (2004) J Biol Chem , vol.279 , pp. 41259-41262
    • Wackett, L.P.1
  • 80
    • 1642266711 scopus 로고    scopus 로고
    • Stable isotope probing in biodegradation research
    • Wackett LP (2004b) Stable isotope probing in biodegradation research. Trends Biotechnol 22 : 153 154.
    • (2004) Trends Biotechnol , vol.22 , pp. 153-154
    • Wackett, L.P.1
  • 82
    • 0035823264 scopus 로고    scopus 로고
    • The small world inside large metabolic networks
    • Wagner A Fell DA (2001) The small world inside large metabolic networks. P Roy Soc B-Biol Sci 268 : 1803 1810.
    • (2001) P Roy Soc B-Biol Sci , vol.268 , pp. 1803-1810
    • Wagner, A.1    Fell, D.A.2
  • 83
    • 0002438176 scopus 로고    scopus 로고
    • Bioaugmentation
    • Hurst, C.J., ed), pp. ASM Press, Washington, DC.
    • Walter MV (1997) Bioaugmentation. Manual of Environmental Microbiology (Hurst CJ, ed), pp. 753 765. ASM Press, Washington, DC.
    • (1997) Manual of Environmental Microbiology , pp. 753-765
    • Walter, M.V.1
  • 85
    • 34250726464 scopus 로고    scopus 로고
    • Development and evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in Acid Mine Drainages and bioleaching systems
    • Yin H, Cao L, Qiu G, Wang D, Kellogg L, Zhou J, Dai Z Liu X (2007) Development and evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in Acid Mine Drainages and bioleaching systems. J Microbiol Meth 70 : 165 178.
    • (2007) J Microbiol Meth , vol.70 , pp. 165-178
    • Yin, H.1    Cao, L.2    Qiu, G.3    Wang, D.4    Kellogg, L.5    Zhou, J.6    Dai, Z.7    Liu, X.8
  • 86
    • 40549127109 scopus 로고    scopus 로고
    • Insights into environmental bioremediation by microorganisms through functional genomics and proteomics
    • Zhao B Poh CL (2008) Insights into environmental bioremediation by microorganisms through functional genomics and proteomics. Proteomics 8 : 874 881.
    • (2008) Proteomics , vol.8 , pp. 874-881
    • Zhao, B.1    Poh, C.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.