메뉴 건너뛰기




Volumn 19, Issue 7-8, 2008, Pages 552-560

Using hippocampal microRNA expression differences between mouse inbred strains to characterise miRNA function

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA;

EID: 56949100690     PISSN: 09388990     EISSN: 14321777     Source Type: Journal    
DOI: 10.1007/s00335-008-9116-y     Document Type: Article
Times cited : (37)

References (61)
  • 3
    • 33747884345 scopus 로고    scopus 로고
    • Gene expression omnibus: Microarray data storage, submission, retrieval, and analysis
    • T Barrett R Edgar 2006 Gene expression omnibus: microarray data storage, submission, retrieval, and analysis Methods Enzymol 411 352 369
    • (2006) Methods Enzymol , vol.411 , pp. 352-369
    • Barrett, T.1    Edgar, R.2
  • 4
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • DP Bartel 2004 MicroRNAs: genomics, biogenesis, mechanism, and function Cell 116 281 297
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 5
    • 0026775863 scopus 로고
    • Chromosome mapping of gene loci affecting morphine and amphetamine responses in BXD recombinant inbred mice
    • JK Belknap JC Crabbe 1992 Chromosome mapping of gene loci affecting morphine and amphetamine responses in BXD recombinant inbred mice Ann N Y Acad Sci 654 311 323
    • (1992) Ann N Y Acad Sci , vol.654 , pp. 311-323
    • Belknap, J.K.1    Crabbe, J.C.2
  • 6
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Y Benjamini Y Hochberg 1995 Controlling the false discovery rate: a practical and powerful approach to multiple testing J R Statist Soc B 57 289 300
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 7
    • 38549124383 scopus 로고    scopus 로고
    • MicroRNA target predictions: The microRNA.org resource: Targets and expression
    • D Betel M Wilson A Gabow DS Marks C Sander 2008 microRNA target predictions: the microRNA.org resource: targets and expression Nucleic Acids Res 36 D149 D153
    • (2008) Nucleic Acids Res , vol.36
    • Betel, D.1    Wilson, M.2    Gabow, A.3    Marks, D.S.4    Sander, C.5
  • 10
    • 35448950792 scopus 로고    scopus 로고
    • Regulated expression of microRNAs in normal and polycythemia vera erythropoiesis
    • H Bruchova D Yoon AM Agarwal J Mendell JT Prchal 2007 Regulated expression of microRNAs in normal and polycythemia vera erythropoiesis Exp Hematol 35 1657 1667
    • (2007) Exp Hematol , vol.35 , pp. 1657-1667
    • Bruchova, H.1    Yoon, D.2    Agarwal, A.M.3    Mendell, J.4    Prchal, J.T.5
  • 11
    • 20144383240 scopus 로고    scopus 로고
    • Uncovering regulatory pathways that affect hematopoietic stem cell function using 'genetical genomics'
    • L Bystrykh E Weersing B Dontje S Sutton MT Pletcher 2005 Uncovering regulatory pathways that affect hematopoietic stem cell function using 'genetical genomics' Nat Genet 37 225 232
    • (2005) Nat Genet , vol.37 , pp. 225-232
    • Bystrykh, L.1    Weersing, E.2    Dontje, B.3    Sutton, S.4    Pletcher, M.T.5
  • 12
    • 34548164577 scopus 로고    scopus 로고
    • RNA interference: Hitting the on switch
    • E Check 2007 RNA interference: hitting the on switch Nature 448 855 858
    • (2007) Nature , vol.448 , pp. 855-858
    • Check, E.1
  • 13
    • 0346727524 scopus 로고    scopus 로고
    • MicroRNAs modulate hematopoietic lineage differentiation
    • CZ Chen L Li HF Lodish DP Bartel 2004 MicroRNAs modulate hematopoietic lineage differentiation Science 303 83 86
    • (2004) Science , vol.303 , pp. 83-86
    • Chen, C.Z.1    Li, L.2    Lodish, H.F.3    Bartel, D.P.4
  • 14
    • 2142652098 scopus 로고    scopus 로고
    • WebQTL: Rapid exploratory analysis of gene expression and genetic networks for brain and behavior
    • 5
    • EJ Chesler L Lu J Wang RW Williams KF Manly 2004 WebQTL: rapid exploratory analysis of gene expression and genetic networks for brain and behavior Nat Neurosci 7 5 485 486
    • (2004) Nat Neurosci , vol.7 , pp. 485-486
    • Chesler, E.J.1    Lu, L.2    Wang, J.3    Williams, R.W.4    Manly, K.F.5
  • 15
    • 36048929095 scopus 로고    scopus 로고
    • Association of the Slit and Trk-like 1 gene in Taiwanese patients with Tourette syndrome
    • IC Chou L Wan SC Liu CH Tsai FJ Tsai 2007 Association of the Slit and Trk-like 1 gene in Taiwanese patients with Tourette syndrome Pediatr Neurol 37 404 406
    • (2007) Pediatr Neurol , vol.37 , pp. 404-406
    • Chou, I.C.1    Wan, L.2    Liu, S.C.3    Tsai, C.H.4    Tsai, F.J.5
  • 16
    • 35548980470 scopus 로고    scopus 로고
    • Recombinant inbred strain panels: A tool for systems genetics
    • GA Churchill 2007 Recombinant inbred strain panels: a tool for systems genetics Physiol Genomics 31 174 175
    • (2007) Physiol Genomics , vol.31 , pp. 174-175
    • Churchill, G.A.1
  • 17
    • 10944225074 scopus 로고    scopus 로고
    • A genetic and genomic approach to identify longevity genes in mice
    • G de Haan RW Williams 2005 A genetic and genomic approach to identify longevity genes in mice Mech Ageing Dev 126 133 138
    • (2005) Mech Ageing Dev , vol.126 , pp. 133-138
    • De Haan, G.1    Williams, R.W.2
  • 18
    • 2442528767 scopus 로고    scopus 로고
    • Hippocampal gene expression profiling across eight mouse inbred strains towards understanding the molecular basis for behaviour
    • C Fernandes JL Paya-Cano F Sluyter U D'Souza R Plomin 2004 Hippocampal gene expression profiling across eight mouse inbred strains towards understanding the molecular basis for behaviour Eur J Neurosci 19 2576 2582
    • (2004) Eur J Neurosci , vol.19 , pp. 2576-2582
    • Fernandes, C.1    Paya-Cano, J.L.2    Sluyter, F.3    D'Souza, U.4    Plomin, R.5
  • 19
    • 37049005341 scopus 로고    scopus 로고
    • MicroRNAs in synapse development: Tiny molecules to remember
    • R Fiore G Schratt 2007 MicroRNAs in synapse development: tiny molecules to remember Expert Opin Biol Ther 7 1823 1831
    • (2007) Expert Opin Biol Ther , vol.7 , pp. 1823-1831
    • Fiore, R.1    Schratt, G.2
  • 20
    • 18144365478 scopus 로고    scopus 로고
    • MicroRNA biogenesis and cancer
    • RI Gregory R Shiekhattar 2005 MicroRNA biogenesis and cancer Cancer Res 65 3509 3512
    • (2005) Cancer Res , vol.65 , pp. 3509-3512
    • Gregory, R.I.1    Shiekhattar, R.2
  • 22
    • 0035827344 scopus 로고    scopus 로고
    • In silico mapping of complex disease-related traits in mice
    • A Grupe S Germer J Usuka D Aud JK Belknap 2001 In silico mapping of complex disease-related traits in mice Science 292 1915 1918
    • (2001) Science , vol.292 , pp. 1915-1918
    • Grupe, A.1    Germer, S.2    Usuka, J.3    Aud, D.4    Belknap, J.K.5
  • 25
    • 37049010980 scopus 로고    scopus 로고
    • The guardian's little helper: MicroRNAs in the p53 tumor suppressor network
    • X He L He GJ Hannon 2007 The guardian's little helper: microRNAs in the p53 tumor suppressor network Cancer Res 67 11099 11101
    • (2007) Cancer Res , vol.67 , pp. 11099-11101
    • He, X.1    He, L.2    Hannon, G.J.3
  • 26
    • 23044477984 scopus 로고    scopus 로고
    • Complement factor 5 is a quantitative trait gene that modifies liver fibrogenesis in mice and humans
    • S Hillebrandt HE Wasmuth R Weiskirchen C Hellerbrand H Keppeler 2005 Complement factor 5 is a quantitative trait gene that modifies liver fibrogenesis in mice and humans Nat Genet 37 835 843
    • (2005) Nat Genet , vol.37 , pp. 835-843
    • Hillebrandt, S.1    Wasmuth, H.E.2    Weiskirchen, R.3    Hellerbrand, C.4    Keppeler, H.5
  • 27
    • 28444445972 scopus 로고    scopus 로고
    • Glyoxalase 1 and glutathione reductase 1 regulate anxiety in mice
    • I Hovatta RS Tennant R Helton RA Marr O Singer 2005 Glyoxalase 1 and glutathione reductase 1 regulate anxiety in mice Nature 438 662 666
    • (2005) Nature , vol.438 , pp. 662-666
    • Hovatta, I.1    Tennant, R.S.2    Helton, R.3    Marr, R.A.4    Singer, O.5
  • 29
    • 0030305457 scopus 로고    scopus 로고
    • R: A language for data analysis and graphics
    • R Ihaka R Gentleman 1996 R: a language for data analysis and graphics J Comput Graph Stat 5 299 314
    • (1996) J Comput Graph Stat , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2
  • 30
    • 35848945091 scopus 로고    scopus 로고
    • MicroRNA profiling of developing and regenerating pancreas reveal post-transcriptional regulation of neurogenin3
    • MV Joglekar VS Parekh S Mehta RR Bhonde AA Hardikar 2007 MicroRNA profiling of developing and regenerating pancreas reveal post-transcriptional regulation of neurogenin3 Dev Biol 311 603 612
    • (2007) Dev Biol , vol.311 , pp. 603-612
    • Joglekar, M.V.1    Parekh, V.S.2    Mehta, S.3    Bhonde, R.R.4    Hardikar, A.A.5
  • 31
    • 0037772254 scopus 로고    scopus 로고
    • The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter
    • SM Johnson SY Lin FJ Slack 2003 The time of appearance of the C. elegans let-7 microRNA is transcriptionally controlled utilizing a temporal regulatory element in its promoter Dev Biol 259 364 379
    • (2003) Dev Biol , vol.259 , pp. 364-379
    • Johnson, S.M.1    Lin, S.Y.2    Slack, F.J.3
  • 32
    • 18344369543 scopus 로고    scopus 로고
    • MicroRNA biogenesis: Coordinated cropping and dicing
    • VN Kim 2005 MicroRNA biogenesis: coordinated cropping and dicing Nat Rev Mol Cell Biol 6 376 385
    • (2005) Nat Rev Mol Cell Biol , vol.6 , pp. 376-385
    • Kim, V.N.1
  • 33
    • 33748928159 scopus 로고    scopus 로고
    • The diverse functions of microRNAs in animal development and disease
    • WP Kloosterman RH Plasterk 2006 The diverse functions of microRNAs in animal development and disease Dev Cell 11 441 450
    • (2006) Dev Cell , vol.11 , pp. 441-450
    • Kloosterman, W.P.1    Plasterk, R.H.2
  • 34
    • 42049104107 scopus 로고    scopus 로고
    • Exploration of tumor-suppressive microRNAs silenced by DNA hypermethylation in oral cancer
    • K Kozaki I Imoto S Mogi K Omura J Inazawa 2008 Exploration of tumor-suppressive microRNAs silenced by DNA hypermethylation in oral cancer Cancer Res 68 2094 2105
    • (2008) Cancer Res , vol.68 , pp. 2094-2105
    • Kozaki, K.1    Imoto, I.2    Mogi, S.3    Omura, K.4    Inazawa, J.5
  • 35
    • 10344248903 scopus 로고    scopus 로고
    • The human DiGeorge syndrome critical region gene 8 and its D. melanogaster homolog are required for miRNA biogenesis
    • M Landthaler A Yalcin T Tuschl 2004 The human DiGeorge syndrome critical region gene 8 and its D. melanogaster homolog are required for miRNA biogenesis Curr Biol 14 2162 2167
    • (2004) Curr Biol , vol.14 , pp. 2162-2167
    • Landthaler, M.1    Yalcin, A.2    Tuschl, T.3
  • 36
    • 38049103266 scopus 로고    scopus 로고
    • MicroRNA-378 promotes cell survival, tumor growth, and angiogenesis by targeting SuFu and Fus-1 expression
    • DY Lee Z Deng CH Wang BB Yang 2007 MicroRNA-378 promotes cell survival, tumor growth, and angiogenesis by targeting SuFu and Fus-1 expression Proc Natl Acad Sci USA 104 20350 20355
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 20350-20355
    • Lee, D.Y.1    Deng, Z.2    Wang, C.H.3    Yang, B.B.4
  • 37
    • 33745615104 scopus 로고    scopus 로고
    • First in vivo evidence of microRNA-induced fragile X mental retardation syndrome
    • SL Lin SJ Chang SY Ying 2006 First in vivo evidence of microRNA-induced fragile X mental retardation syndrome Mol Psychiatry 11 616 617
    • (2006) Mol Psychiatry , vol.11 , pp. 616-617
    • Lin, S.L.1    Chang, S.J.2    Ying, S.Y.3
  • 38
    • 38549083432 scopus 로고    scopus 로고
    • Large-scale in silico mapping of complex quantitative traits in inbred mice
    • P Liu H Vikis Y Lu D Wang M You 2007 Large-scale in silico mapping of complex quantitative traits in inbred mice PLoS ONE 2 e651
    • (2007) PLoS ONE , vol.2 , pp. 651
    • Liu, P.1    Vikis, H.2    Lu, Y.3    Wang, D.4    You, M.5
  • 39
    • 33751320646 scopus 로고    scopus 로고
    • Large-scale gene expression differences across brain regions and inbred strains correlate with a behavioral phenotype
    • JJ Nadler F Zou H Huang SS Moy J Lauder 2006 Large-scale gene expression differences across brain regions and inbred strains correlate with a behavioral phenotype Genetics 174 1229 1236
    • (2006) Genetics , vol.174 , pp. 1229-1236
    • Nadler, J.J.1    Zou, F.2    Huang, H.3    Moy, S.S.4    Lauder, J.5
  • 40
  • 41
    • 20044394908 scopus 로고    scopus 로고
    • Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse
    • MT Pletcher P McClurg S Batalov AI Su SW Barnes 2004 Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse PLoS Biol 2 e393
    • (2004) PLoS Biol , vol.2 , pp. 393
    • Pletcher, M.T.1    McClurg, P.2    Batalov, S.3    Su, A.I.4    Barnes, S.W.5
  • 42
    • 33748793116 scopus 로고    scopus 로고
    • Analysis of short RNAs in the malaria parasite and its red blood cell host
    • T Rathjen C Nicol G McConkey T Dalmay 2006 Analysis of short RNAs in the malaria parasite and its red blood cell host FEBS Lett 580 5185 5188
    • (2006) FEBS Lett , vol.580 , pp. 5185-5188
    • Rathjen, T.1    Nicol, C.2    McConkey, G.3    Dalmay, T.4
  • 45
    • 39049128249 scopus 로고    scopus 로고
    • Altered expression of miR-21, miR-31, miR-143 and miR-145 is related to clinicopathologic features of colorectal cancer
    • O Slaby M Svoboda P Fabian T Smerdova D Knoflickova 2007 Altered expression of miR-21, miR-31, miR-143 and miR-145 is related to clinicopathologic features of colorectal cancer Oncology 72 397 402
    • (2007) Oncology , vol.72 , pp. 397-402
    • Slaby, O.1    Svoboda, M.2    Fabian, P.3    Smerdova, T.4    Knoflickova, D.5
  • 46
    • 38649105208 scopus 로고    scopus 로고
    • Adhesion molecules and receptors
    • CW Smith 2008 Adhesion molecules and receptors J Allergy Clin Immunol 121 S375 S379
    • (2008) J Allergy Clin Immunol , vol.121
    • Smith, C.W.1
  • 47
    • 40449098091 scopus 로고    scopus 로고
    • MicroRNAs and immunity: Novel players in the regulation of normal immune function and inflammation
    • E Sonkoly M Ståhle A Pivarcsi 2008 MicroRNAs and immunity: novel players in the regulation of normal immune function and inflammation Semin Cancer Biol 18 131 140
    • (2008) Semin Cancer Biol , vol.18 , pp. 131-140
    • Sonkoly, E.1    Ståhle, M.2    Pivarcsi, A.3
  • 48
    • 34250688883 scopus 로고    scopus 로고
    • Multiple trait measurements in 43 inbred mouse strains captures the phenotypic diversity characteristic of human populations
    • K Svenson RV Smith P Magnani H Suetin B Paigen 2007 Multiple trait measurements in 43 inbred mouse strains captures the phenotypic diversity characteristic of human populations J Appl Physiol 102 2369 2378
    • (2007) J Appl Physiol , vol.102 , pp. 2369-2378
    • Svenson, K.1    Smith, R.V.2    Magnani, P.3    Suetin, H.4    Paigen, B.5
  • 49
    • 38349109046 scopus 로고    scopus 로고
    • Effect of alcohol on miR-212 expression in intestinal epithelial cells and its potential role in alcoholic liver disease
    • Y Tang A Banan CB Forsyth JZ Fields CK Lau 2008 Effect of alcohol on miR-212 expression in intestinal epithelial cells and its potential role in alcoholic liver disease Alcohol Clin Exp Res 32 355 364
    • (2008) Alcohol Clin Exp Res , vol.32 , pp. 355-364
    • Tang, Y.1    Banan, A.2    Forsyth, C.B.3    Fields, J.Z.4    Lau, C.K.5
  • 51
    • 43749113595 scopus 로고    scopus 로고
    • Modulation of miRNA activity in human cancer: A new paradigm for cancer gene therapy?
    • AW Tong J Nemunaitis 2008 Modulation of miRNA activity in human cancer: a new paradigm for cancer gene therapy? Cancer Gene Ther 15 341 355
    • (2008) Cancer Gene Ther , vol.15 , pp. 341-355
    • Tong, A.W.1    Nemunaitis, J.2
  • 52
    • 33845317603 scopus 로고    scopus 로고
    • A signature pattern of stress-responsive microRNAs that can evoke cardiac hypertrophy and heart failure
    • E van Rooij LB Sutherland N Liu AH Williams J McAnally 2006 A signature pattern of stress-responsive microRNAs that can evoke cardiac hypertrophy and heart failure Proc Natl Acad Sci USA 103 18255 18260
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 18255-18260
    • Van Rooij, E.1    Sutherland, L.B.2    Liu, N.3    Williams, A.H.4    McAnally, J.5
  • 53
    • 34247589595 scopus 로고    scopus 로고
    • Control of stress-dependent cardiac growth and gene expression by a microRNA
    • E van Rooij LB Sutherland X Qi JA Richardson J Hill 2007 Control of stress-dependent cardiac growth and gene expression by a microRNA Science 316 575 579
    • (2007) Science , vol.316 , pp. 575-579
    • Van Rooij, E.1    Sutherland, L.B.2    Qi, X.3    Richardson, J.A.4    Hill, J.5
  • 55
    • 4444358681 scopus 로고    scopus 로고
    • Comparison of hybridization behavior between double and single strands of targets and the application of asymmetric PCR targets in cDNA microarray
    • Q Wei S Liu J Huang X Mao X Chu 2004 Comparison of hybridization behavior between double and single strands of targets and the application of asymmetric PCR targets in cDNA microarray J Biochem Mol Biol 37 439 444
    • (2004) J Biochem Mol Biol , vol.37 , pp. 439-444
    • Wei, Q.1    Liu, S.2    Huang, J.3    Mao, X.4    Chu, X.5
  • 57
    • 2142654329 scopus 로고    scopus 로고
    • MicroRNA-directed cleavage of HOXB8 mRNA
    • S Yekta IH Shih DP Bartel 2004 MicroRNA-directed cleavage of HOXB8 mRNA Science 304 594 596
    • (2004) Science , vol.304 , pp. 594-596
    • Yekta, S.1    Shih, I.H.2    Bartel, D.P.3
  • 59
    • 23144464901 scopus 로고    scopus 로고
    • WebGestalt: An integrated system for exploring gene sets in various biological contexts
    • B Zhang S Kirov J Snoddy 2005 WebGestalt: an integrated system for exploring gene sets in various biological contexts Nucleic Acids Res 33 W741 W748
    • (2005) Nucleic Acids Res , vol.33
    • Zhang, B.1    Kirov, S.2    Snoddy, J.3
  • 60
    • 33845601726 scopus 로고    scopus 로고
    • MicroRNAs and their regulatory roles in animals and plants
    • B Zhang Q Wang X Pan 2007 MicroRNAs and their regulatory roles in animals and plants J Cell Physiol 210 279 289
    • (2007) J Cell Physiol , vol.210 , pp. 279-289
    • Zhang, B.1    Wang, Q.2    Pan, X.3
  • 61
    • 34248196026 scopus 로고    scopus 로고
    • Rapid evolution of an X-linked microRNA cluster in primates
    • R Zhang Y Peng W Wang B Su 2007 Rapid evolution of an X-linked microRNA cluster in primates Genome Res 17 612 617
    • (2007) Genome Res , vol.17 , pp. 612-617
    • Zhang, R.1    Peng, Y.2    Wang, W.3    Su, B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.