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Volumn 2, Issue 12, 2004, Pages

Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse

Author keywords

[No Author keywords available]

Indexed keywords

ADENYLATE CYCLASE; NUCLEOTIDE; HIGH DENSITY LIPOPROTEIN;

EID: 20044394908     PISSN: 15449173     EISSN: None     Source Type: Journal    
DOI: 10.1371/journal.pbio.0020393     Document Type: Article
Times cited : (205)

References (43)
  • 1
    • 0242291131 scopus 로고    scopus 로고
    • The nature and identification of quantitative trait loci: A community's view
    • Abiola O, Angel JM, Avner P, Bachmanov AA, Belknap JK, et al. (2003) The nature and identification of quantitative trait loci: A community's view. Nat Rev Genet 4: 911-916.
    • (2003) Nat Rev Genet , vol.4 , pp. 911-916
    • Abiola, O.1    Angel, J.M.2    Avner, P.3    Bachmanov, A.A.4    Belknap, J.K.5
  • 2
    • 0038352163 scopus 로고    scopus 로고
    • Quantitative trait locus analysis of serum insulin, triglyceride, total cholesterol and phospholipid levels in the (SM/J x A/J)F2 mice
    • Anunciado RV, Nishimura M, Mori M, Ishikawa A, Tanaka S, et al. (2003) Quantitative trait locus analysis of serum insulin, triglyceride, total cholesterol and phospholipid levels in the (SM/J x A/J)F2 mice. Exp Anim 52: 37-42.
    • (2003) Exp Anim , vol.52 , pp. 37-42
    • Anunciado, R.V.1    Nishimura, M.2    Mori, M.3    Ishikawa, A.4    Tanaka, S.5
  • 3
    • 0034802060 scopus 로고    scopus 로고
    • Positional cloning of the mouse saccharin preference (Sac) locus, Tas1r3 encoding a new candidate taste receptor, is allelic to the sweet responsiveness locus Sac
    • Bachmanov AA, Li X, Reed DR, Ohmen JD, Li S, et al. (2001) Positional cloning of the mouse saccharin preference (Sac) locus, Tas1r3 encoding a new candidate taste receptor, is allelic to the sweet responsiveness locus Sac. Chem Senses 26: 925-933.
    • (2001) Chem Senses , vol.26 , pp. 925-933
    • Bachmanov, A.A.1    Li, X.2    Reed, D.R.3    Ohmen, J.D.4    Li, S.5
  • 5
    • 0141456367 scopus 로고    scopus 로고
    • Mouse Phenome Project: Understanding human biology through mouse genetics and genomics
    • Bogue M (2003) Mouse Phenome Project: Understanding human biology through mouse genetics and genomics. J Appl Physiol 95: 1335-1337.
    • (2003) J Appl Physiol , vol.95 , pp. 1335-1337
    • Bogue, M.1
  • 6
    • 10244221216 scopus 로고    scopus 로고
    • Quantitative trait loci influencing cholesterol and phospholipid phenotypes map to chromosomes that contain genes regulating blood pressure in the spontaneously hypertensive rat
    • Bottger A, van Lith HA, Kren V, Krenova D, Bila V, et al. (1996) Quantitative trait loci influencing cholesterol and phospholipid phenotypes map to chromosomes that contain genes regulating blood pressure in the spontaneously hypertensive rat. J Clin Invest 98: 856-862.
    • (1996) J Clin Invest , vol.98 , pp. 856-862
    • Bottger, A.1    Van Lith, H.A.2    Kren, V.3    Krenova, D.4    Bila, V.5
  • 7
    • 0024990758 scopus 로고
    • Retinal degeneration in the rd mouse is caused by a defect in the beta subunit of rod cGMP-phosphodiesterase
    • Bowes C, Li T, Danciger M, Baxter LC, Applebury ML, et al. (1990) Retinal degeneration in the rd mouse is caused by a defect in the beta subunit of rod cGMP-phosphodiesterase. Nature 347: 677-680.
    • (1990) Nature , vol.347 , pp. 677-680
    • Bowes, C.1    Li, T.2    Danciger, M.3    Baxter, L.C.4    Applebury, M.L.5
  • 8
    • 0027049534 scopus 로고
    • Molecular characterization of the mouse agouti locus
    • Bultman SJ, Michaud EJ, Woychik RP (1992) Molecular characterization of the mouse agouti locus. Cell 71: 1195-1204.
    • (1992) Cell , vol.71 , pp. 1195-1204
    • Bultman, S.J.1    Michaud, E.J.2    Woychik, R.P.3
  • 10
    • 0035930506 scopus 로고    scopus 로고
    • In silico mapping of mouse quantitative trait loci
    • Chesler EJ, Rodriguez-Zas SL, Mogil JS (2001) In silico mapping of mouse quantitative trait loci. Science 294: 2423.
    • (2001) Science , vol.294 , pp. 2423
    • Chesler, E.J.1    Rodriguez-Zas, S.L.2    Mogil, J.S.3
  • 11
    • 0028151261 scopus 로고
    • Empirical threshold values for quantitative trait mapping
    • Churchill GA, Doerge RW (1994) Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
    • (1994) Genetics , vol.138 , pp. 963-971
    • Churchill, G.A.1    Doerge, R.W.2
  • 12
    • 0035930563 scopus 로고    scopus 로고
    • In silico mapping of mouse quantitative trait loci
    • Darvasi A (2001) In silico mapping of mouse quantitative trait loci. Science 294: 2423.
    • (2001) Science , vol.294 , pp. 2423
    • Darvasi, A.1
  • 13
    • 14044252027 scopus 로고    scopus 로고
    • Multiple testing. Part I. Single-step procedures for control of general Type I error rates
    • Dudoit S, van der Laan MJ, Pollard KS (2004) Multiple testing. Part I. Single-step procedures for control of general Type I error rates. Stat Appl Genet Mol Biol 3(1). Available: http://www.bepress.com/sagmb/ via the Internet. Accessed 6 October 2004.
    • (2004) Stat Appl Genet Mol Biol , vol.3 , Issue.1
    • Dudoit, S.1    Van Der Laan, M.J.2    Pollard, K.S.3
  • 14
    • 4444329913 scopus 로고    scopus 로고
    • Segmental phylogenetic relationships of inbred mouse strains revealed by fine-scale analysis of sequence variation across 4.6 mb of mouse genome
    • Frazer KA, Wade CM, Hinds DA, Patil N, Cox DR, et al. (2004) Segmental phylogenetic relationships of inbred mouse strains revealed by fine-scale analysis of sequence variation across 4.6 mb of mouse genome. Genome Res 14: 1493-1500.
    • (2004) Genome Res , vol.14 , pp. 1493-1500
    • Frazer, K.A.1    Wade, C.M.2    Hinds, D.A.3    Patil, N.4    Cox, D.R.5
  • 15
    • 0016167786 scopus 로고
    • Single-locus control of saccharin preference in mice
    • Fuller JL (1974) Single-locus control of saccharin preference in mice. J Hered 65: 33-36.
    • (1974) J Hered , vol.65 , pp. 33-36
    • Fuller, J.L.1
  • 16
    • 0035827344 scopus 로고    scopus 로고
    • In silico mapping of complex disease-related traits in mice
    • Grupe A, Germer S, Usuka J, Aud D, Belknap JK, et al. (2001) In silico mapping of complex disease-related traits in mice. Science 292: 1915-1918.
    • (2001) Science , vol.292 , pp. 1915-1918
    • Grupe, A.1    Germer, S.2    Usuka, J.3    Aud, D.4    Belknap, J.K.5
  • 17
    • 0032966978 scopus 로고    scopus 로고
    • Quantitative trait locus analysis of plasma lipoprotein levels in an autoimmune mouse model: Interactions between lipoprotein metabolism, autoimmune disease, and atherogenesis
    • Gu L, Johnson MW, Lusis AJ (1999) Quantitative trait locus analysis of plasma lipoprotein levels in an autoimmune mouse model: Interactions between lipoprotein metabolism, autoimmune disease, and atherogenesis. Arterioscler Thromb Vasc Biol 19: 442-453.
    • (1999) Arterioscler Thromb Vasc Biol , vol.19 , pp. 442-453
    • Gu, L.1    Johnson, M.W.2    Lusis, A.J.3
  • 18
    • 0013587129 scopus 로고
    • Isolation and sequence of a cDNA clone for human tyrosinase that maps at the mouse c-albino locus
    • Kwon BS, Haq AK, Pomerantz SH, Halaban R (1987) Isolation and sequence of a cDNA clone for human tyrosinase that maps at the mouse c-albino locus. Proc Natl Acad Sci U S A 84: 7473-7477.
    • (1987) Proc Natl Acad Sci U S A , vol.84 , pp. 7473-7477
    • Kwon, B.S.1    Haq, A.K.2    Pomerantz, S.H.3    Halaban, R.4
  • 19
    • 0036829951 scopus 로고    scopus 로고
    • Lith genes control mucin accumulation, cholesterol crystallization, and gallstone formation in A/J and AKR/J inbred mice
    • Lammert F, Wang DQ, Wittenburg H, Bouchard G, Hillebrandt S, et al. (2002) Lith genes control mucin accumulation, cholesterol crystallization, and gallstone formation in A/J and AKR/J inbred mice. Hepatology 36: 1145-1154.
    • (2002) Hepatology , vol.36 , pp. 1145-1154
    • Lammert, F.1    Wang, D.Q.2    Wittenburg, H.3    Bouchard, G.4    Hillebrandt, S.5
  • 20
    • 0028877463 scopus 로고
    • Genetic dissection of complex traits: Guidelines for interpreting and reporting linkage results
    • Lander E, Kruglyak L (1995) Genetic dissection of complex traits: Guidelines for interpreting and reporting linkage results. Nat Genet 11: 241-247.
    • (1995) Nat Genet , vol.11 , pp. 241-247
    • Lander, E.1    Kruglyak, L.2
  • 21
    • 17044441930 scopus 로고    scopus 로고
    • Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse
    • Lindblad-Toh K, Winchester E, Daly MJ, Wang DG, Hirschhorn JN, et al. (2000) Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse. Nat Genet 24: 381-386.
    • (2000) Nat Genet , vol.24 , pp. 381-386
    • Lindblad-Toh, K.1    Winchester, E.2    Daly, M.J.3    Wang, D.G.4    Hirschhorn, J.N.5
  • 22
    • 0041993625 scopus 로고    scopus 로고
    • Lith6: A new QTL for cholesterol gallstones from an intercross of CAST/Ei and DBA/2J inbred mouse strains
    • Lyons MA, Wittenburg H, Li R, Walsh KA, Leonard MR, et al. (2003a) Lith6: A new QTL for cholesterol gallstones from an intercross of CAST/Ei and DBA/2J inbred mouse strains. J Lipid Res 44: 1763-1771.
    • (2003) J Lipid Res , vol.44 , pp. 1763-1771
    • Lyons, M.A.1    Wittenburg, H.2    Li, R.3    Walsh, K.A.4    Leonard, M.R.5
  • 23
    • 0141798516 scopus 로고    scopus 로고
    • New quantitative trait loci that contribute to cholesterol gallstone formation detected in an intercross of CAST/Ei and 129S1/SvImJ inbred mice
    • Lyons MA, Wittenburg H, Li R, Walsh KA, Leonard MR, et al. (2003b) New quantitative trait loci that contribute to cholesterol gallstone formation detected in an intercross of CAST/Ei and 129S1/SvImJ inbred mice. Physiol Genomics 14: 225-239.
    • (2003) Physiol Genomics , vol.14 , pp. 225-239
    • Lyons, M.A.1    Wittenburg, H.2    Li, R.3    Walsh, K.A.4    Leonard, M.R.5
  • 24
    • 0030893854 scopus 로고    scopus 로고
    • Complex genetic control of HDL levels in mice in response to an atherogenic diet. Coordinate regulation of HDL levels and bile acid metabolism
    • Machleder D, Ivandic B, Welch C, Castellani L, Reue K, et al. (1997) Complex genetic control of HDL levels in mice in response to an atherogenic diet. Coordinate regulation of HDL levels and bile acid metabolism. J Clin Invest 99: 1406-1419.
    • (1997) J Clin Invest , vol.99 , pp. 1406-1419
    • Machleder, D.1    Ivandic, B.2    Welch, C.3    Castellani, L.4    Reue, K.5
  • 25
    • 0037326899 scopus 로고    scopus 로고
    • A quantitative trait locus on chromosome 16q influences variation in plasma HDL-C levels in Mexican Americans
    • Mahaney MC, Almasy L, Rainwater DL, VandeBerg JL, Cole SA, et al. (2003) A quantitative trait locus on chromosome 16q influences variation in plasma HDL-C levels in Mexican Americans. Arterioscler Thromb Vasc Biol 23: 339-345.
    • (2003) Arterioscler Thromb Vasc Biol , vol.23 , pp. 339-345
    • Mahaney, M.C.1    Almasy, L.2    Rainwater, D.L.3    VandeBerg, J.L.4    Cole, S.A.5
  • 26
    • 0035030731 scopus 로고    scopus 로고
    • Tas1r3 encoding a new candidate taste receptor, is allelic to the sweet responsiveness locus Sac
    • Max M, Shanker YG, Huang L, Rong M, Liu Z, et al. (2001) Tas1r3 encoding a new candidate taste receptor, is allelic to the sweet responsiveness locus Sac. Nat Genet 28: 58-63.
    • (2001) Nat Genet , vol.28 , pp. 58-63
    • Max, M.1    Shanker, Y.G.2    Huang, L.3    Rong, M.4    Liu, Z.5
  • 27
    • 0037204994 scopus 로고    scopus 로고
    • A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome
    • Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GL, et al. (2002) A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Science 296: 1661-1671.
    • (2002) Science , vol.296 , pp. 1661-1671
    • Mural, R.J.1    Adams, M.D.2    Myers, E.W.3    Smith, H.O.4    Miklos, G.L.5
  • 31
    • 0037385395 scopus 로고    scopus 로고
    • Combined analysis of genome scans of Dutch and Finnish families reveals a susceptibility locus for high-density lipoprotein cholesterol on chromosome 16q
    • Pajukanta P, Allayee H, Krass KL, Kuraishy A, Soro A, et al. (2003) Combined analysis of genome scans of Dutch and Finnish families reveals a susceptibility locus for high-density lipoprotein cholesterol on chromosome 16q. Am J Hum Genet 72: 903-917.
    • (2003) Am J Hum Genet , vol.72 , pp. 903-917
    • Pajukanta, P.1    Allayee, H.2    Krass, K.L.3    Kuraishy, A.4    Soro, A.5
  • 32
    • 0031689868 scopus 로고    scopus 로고
    • Ethanol-induced conditioned taste aversion in BXD recombinant inbred mice
    • Risinger FO, Cunningham CL (1998) Ethanol-induced conditioned taste aversion in BXD recombinant inbred mice. Alcohol Clin Exp Res 22: 1234-1244.
    • (1998) Alcohol Clin Exp Res , vol.22 , pp. 1234-1244
    • Risinger, F.O.1    Cunningham, C.L.2
  • 34
    • 0037234409 scopus 로고    scopus 로고
    • In silico quantitative trait locus map for atherosclerosis susceptibility in apolipoprotein E-deficient mice
    • Smith JD, James D, Dansky HM, Wittkowski KM, Moore KJ, et al. (2003) In silico quantitative trait locus map for atherosclerosis susceptibility in apolipoprotein E-deficient mice. Arterioscler Thromb Vasc Biol 23: 117-122.
    • (2003) Arterioscler Thromb Vasc Biol , vol.23 , pp. 117-122
    • Smith, J.D.1    James, D.2    Dansky, H.M.3    Wittkowski, K.M.4    Moore, K.J.5
  • 36
    • 0030810683 scopus 로고    scopus 로고
    • Phenotypic characterization of Lith genes that determine susceptibility to cholesterol cholelithiasis in inbred mice: Physical-chemistry of gallbladder bile
    • Wang DQ, Paigen B, Carey MC (1997) Phenotypic characterization of Lith genes that determine susceptibility to cholesterol cholelithiasis in inbred mice: Physical-chemistry of gallbladder bile. J Lipid Res 38: 1395-1411.
    • (1997) J Lipid Res , vol.38 , pp. 1395-1411
    • Wang, D.Q.1    Paigen, B.2    Carey, M.C.3
  • 37
    • 0036738377 scopus 로고    scopus 로고
    • Quantitative trait loci and candidate genes regulating HDL cholesterol: A murine chromosome map
    • Wang X, Paigen B (2002) Quantitative trait loci and candidate genes regulating HDL cholesterol: A murine chromosome map. Arterioscler Thromb Vasc Biol 22: 1390-1401.
    • (2002) Arterioscler Thromb Vasc Biol , vol.22 , pp. 1390-1401
    • Wang, X.1    Paigen, B.2
  • 38
  • 39
    • 0027973059 scopus 로고
    • Molecular cloning and characterization of the type VII isoform of mammalian adenylyl cyclase expressed widely in mouse tissues and in S49 mouse lymphoma cells
    • Watson PA, Krupinski J, Kempinski AM, Frankenfield CD (1994) Molecular cloning and characterization of the type VII isoform of mammalian adenylyl cyclase expressed widely in mouse tissues and in S49 mouse lymphoma cells. J Biol Chem 269: 28893-28898.
    • (1994) J Biol Chem , vol.269 , pp. 28893-28898
    • Watson, P.A.1    Krupinski, J.2    Kempinski, A.M.3    Frankenfield, C.D.4
  • 40
    • 1842509761 scopus 로고    scopus 로고
    • Novel QTL for HDL levels identified in mice by controlling for Apoa2 allelic effects: Confirmation of a chromosome 6 locus in a congenic strain
    • Welch CL, Bretschger S, Wen PZ, Mehrabian M, Latib N, et al. (2004) Novel QTL for HDL levels identified in mice by controlling for Apoa2 allelic effects: Confirmation of a chromosome 6 locus in a congenic strain. Physiol Genomics 17: 48-59.
    • (2004) Physiol Genomics , vol.17 , pp. 48-59
    • Welch, C.L.1    Bretschger, S.2    Wen, P.Z.3    Mehrabian, M.4    Latib, N.5
  • 42
    • 0346109626 scopus 로고    scopus 로고
    • Interacting QTL for cholesterol gallstones and gallbladder mucin in AKR and SWR strains of mice
    • Wittenburg H, Lammert F, Wang DQ, Churchill GA, Li R, et al. (2002) Interacting QTL for cholesterol gallstones and gallbladder mucin in AKR and SWR strains of mice. Physiol Genomics 8: 67-77.
    • (2002) Physiol Genomics , vol.8 , pp. 67-77
    • Wittenburg, H.1    Lammert, F.2    Wang, D.Q.3    Churchill, G.A.4    Li, R.5
  • 43
    • 3042840998 scopus 로고    scopus 로고
    • Unexpected complexity in the haplotypes of commonly used inbred strains of laboratory mice
    • Yalcin B, Fullerton J, Miller S, Keays DA, Brady S, et al. (2004) Unexpected complexity in the haplotypes of commonly used inbred strains of laboratory mice. Proc Natl Acad Sci U S A 101: 9734-9739.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 9734-9739
    • Yalcin, B.1    Fullerton, J.2    Miller, S.3    Keays, D.A.4    Brady, S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.