-
1
-
-
0036244955
-
The complex structure and dynamic evolution of human subtelomeres
-
Mefford HC, Trask BJ (2002) The complex structure and dynamic evolution of human subtelomeres. Nat Rev Genet 3: 91-102.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 91-102
-
-
Mefford, H.C.1
Trask, B.J.2
-
2
-
-
23944464017
-
The central roles of telomeres and subtelomeres in antigenic variation in African trypanosomes
-
Horn D, Barry JD (2005) The central roles of telomeres and subtelomeres in antigenic variation in African trypanosomes. Chromosome Res 13: 525-533.
-
(2005)
Chromosome Res
, vol.13
, pp. 525-533
-
-
Horn, D.1
Barry, J.D.2
-
3
-
-
43249118838
-
-
Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, et al. (2008) Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. PLoS Genet 4 e1000046.
-
Fedorova ND, Khaldi N, Joardar VS, Maiti R, Amedeo P, et al. (2008) Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. PLoS Genet 4 e1000046.
-
-
-
-
5
-
-
26844506268
-
Regulation of antigen gene expression in Trypanosoma brucei
-
Pays E (2005) Regulation of antigen gene expression in Trypanosoma brucei. Trends Parasitol 21: 517-520.
-
(2005)
Trends Parasitol
, vol.21
, pp. 517-520
-
-
Pays, E.1
-
6
-
-
0029951447
-
DNA rearrangements associated with multiple consecutive directed antigenic switches in Trypanosoma brucei
-
Navarro M, Cross GA (1996) DNA rearrangements associated with multiple consecutive directed antigenic switches in Trypanosoma brucei. Mol Cell Biol 16: 3615-3625.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 3615-3625
-
-
Navarro, M.1
Cross, G.A.2
-
7
-
-
0033758247
-
ESAG11, a new VSG expression site-associated gene from Trypanosoma brucei
-
Redpath MB, Windle H, Nolan D, Pays E, Voorheis HP, et al. (2000) ESAG11, a new VSG expression site-associated gene from Trypanosoma brucei. Mol Biochem Parasitol 111: 223-228.
-
(2000)
Mol Biochem Parasitol
, vol.111
, pp. 223-228
-
-
Redpath, M.B.1
Windle, H.2
Nolan, D.3
Pays, E.4
Voorheis, H.P.5
-
8
-
-
0035946414
-
The VSG expression sites of Trypanosoma brucei: Multipurpose tools for the adaptation of the parasite to mammalian hosts
-
Pays E, Lips S, Nolan D, Vanhamme L, Perez-Morga D (2001) The VSG expression sites of Trypanosoma brucei: multipurpose tools for the adaptation of the parasite to mammalian hosts. Mol Biochem Parasitol 114: 1-16.
-
(2001)
Mol Biochem Parasitol
, vol.114
, pp. 1-16
-
-
Pays, E.1
Lips, S.2
Nolan, D.3
Vanhamme, L.4
Perez-Morga, D.5
-
9
-
-
0026558281
-
A gene from the variant surface glycoprotein expression site encodes one of several transmembrane adenylate cyclases located on the flagellum of Trypanosoma brucei
-
Paindavoine P, Rolin S, Van Assel S, Geuskens M, Jauniaux JC, et al. (1992) A gene from the variant surface glycoprotein expression site encodes one of several transmembrane adenylate cyclases located on the flagellum of Trypanosoma brucei. Mol Cell Biol 12: 1218-1225.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 1218-1225
-
-
Paindavoine, P.1
Rolin, S.2
Van Assel, S.3
Geuskens, M.4
Jauniaux, J.C.5
-
10
-
-
0028362270
-
Reconstitution of a surface transferrin binding complex in insect form Trypanosoma brucei
-
Ligtenberg MJ, Bitter W, Kieft R, Steverding D, Janssen H, et al. (1994) Reconstitution of a surface transferrin binding complex in insect form Trypanosoma brucei. Embo J 13: 2565-2573.
-
(1994)
Embo J
, vol.13
, pp. 2565-2573
-
-
Ligtenberg, M.J.1
Bitter, W.2
Kieft, R.3
Steverding, D.4
Janssen, H.5
-
11
-
-
0031435151
-
Characterization of the ligand-binding site of the transferrin receptor in Trypanosoma brucei demonstrates a structural relationship with the N-terminal domain of the variant surface glycoprotein
-
Salmon D, Hanocq-Quertier J, Paturiaux-Hanocq F, Pays A, Tebabi P, et al. (1997) Characterization of the ligand-binding site of the transferrin receptor in Trypanosoma brucei demonstrates a structural relationship with the N-terminal domain of the variant surface glycoprotein. Embo J 16: 7272-7278.
-
(1997)
Embo J
, vol.16
, pp. 7272-7278
-
-
Salmon, D.1
Hanocq-Quertier, J.2
Paturiaux-Hanocq, F.3
Pays, A.4
Tebabi, P.5
-
12
-
-
0034472569
-
Expression-site-associated gene 8 (ESAG8) of Trypanosoma brucei is apparently essential and accumulates in the nucleolus
-
Hoek M, Engstler M, Cross GA (2000) Expression-site-associated gene 8 (ESAG8) of Trypanosoma brucei is apparently essential and accumulates in the nucleolus. J Cell Sci 113(Pt 22): 3959-3968.
-
(2000)
J Cell Sci
, vol.113
, Issue.PART 22
, pp. 3959-3968
-
-
Hoek, M.1
Engstler, M.2
Cross, G.A.3
-
13
-
-
0037046097
-
Trypanosoma brucei expression-site-associated-gene 8 protein interacts with a Pumilio family protein
-
Hoek M, Zanders T, Cross GAM (2002) Trypanosoma brucei expression-site-associated-gene 8 protein interacts with a Pumilio family protein. Mol Biochem Parasitol 120: 269-283.
-
(2002)
Mol Biochem Parasitol
, vol.120
, pp. 269-283
-
-
Hoek, M.1
Zanders, T.2
Cross, G.A.M.3
-
14
-
-
0028009792
-
A new VSG expression site-associated gene (ESAG) in the promoter region of Trypanosoma brucei encodes a protein with 10 potential transmembrane domains
-
Gottesdiener KM (1994) A new VSG expression site-associated gene (ESAG) in the promoter region of Trypanosoma brucei encodes a protein with 10 potential transmembrane domains. Mol Biochem Parasitol 63: 143-151.
-
(1994)
Mol Biochem Parasitol
, vol.63
, pp. 143-151
-
-
Gottesdiener, K.M.1
-
15
-
-
0026022094
-
A family of genes related to a new expression site-associated gene in Trypanosoma equiperdum
-
Florent IC, Raibaud A, Eisen H (1991) A family of genes related to a new expression site-associated gene in Trypanosoma equiperdum. Mol Cell Biol 11: 2180-2188.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 2180-2188
-
-
Florent, I.C.1
Raibaud, A.2
Eisen, H.3
-
16
-
-
0030592441
-
Targeted disruption of expression site-associated gene-1 in bloodstream-form Trypanosoma brucei
-
Carruthers VB, Navarro M, Cross GA (1996) Targeted disruption of expression site-associated gene-1 in bloodstream-form Trypanosoma brucei. Mol Biochem Parasitol 81: 65-79.
-
(1996)
Mol Biochem Parasitol
, vol.81
, pp. 65-79
-
-
Carruthers, V.B.1
Navarro, M.2
Cross, G.A.3
-
17
-
-
0029887669
-
Differential expression of the expression site-associated gene I family in African trypanosomes
-
Morgan RW, El-Sayed NM, Kepa JK, Pedram M, Donelson JE (1996) Differential expression of the expression site-associated gene I family in African trypanosomes. J Biol Chem 271: 9771-9777.
-
(1996)
J Biol Chem
, vol.271
, pp. 9771-9777
-
-
Morgan, R.W.1
El-Sayed, N.M.2
Kepa, J.K.3
Pedram, M.4
Donelson, J.E.5
-
18
-
-
22244441812
-
The genome of the African trypanosome Trypanosoma brucei
-
Berriman M, Ghedin E, Hertz-Fowler C, Blandin G, Renauld H, et al. (2005) The genome of the African trypanosome Trypanosoma brucei. Science 309: 416-422.
-
(2005)
Science
, vol.309
, pp. 416-422
-
-
Berriman, M.1
Ghedin, E.2
Hertz-Fowler, C.3
Blandin, G.4
Renauld, H.5
-
19
-
-
8744298412
-
Isolation of the repertoire of VSG expression site containing telomeres of Trypanosoma brucei 427 using transformation-associated recombination in yeast
-
Becker M, Aitcheson N, Byles E, Wickstead B, Louis E, et al. (2004) Isolation of the repertoire of VSG expression site containing telomeres of Trypanosoma brucei 427 using transformation-associated recombination in yeast. Genome Res 14: 2319-2329.
-
(2004)
Genome Res
, vol.14
, pp. 2319-2329
-
-
Becker, M.1
Aitcheson, N.2
Byles, E.3
Wickstead, B.4
Louis, E.5
-
20
-
-
0028809565
-
A ribosomal DNA promoter replacing the promoter of a telomeric VSG gene expression site can be efficiently switched on and off in T. brucei
-
Rudenko G, Blundell PA, Dirks-Mulder A, Kieft R, Borst P (1995) A ribosomal DNA promoter replacing the promoter of a telomeric VSG gene expression site can be efficiently switched on and off in T. brucei. Cell 83: 547-553.
-
(1995)
Cell
, vol.83
, pp. 547-553
-
-
Rudenko, G.1
Blundell, P.A.2
Dirks-Mulder, A.3
Kieft, R.4
Borst, P.5
-
21
-
-
0034492653
-
The molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock 427
-
Melville SE, Leech V, Navarro M, Cross GAM (2000) The molecular karyotype of the megabase chromosomes of Trypanosoma brucei stock 427. Mol Biochem Parasitol 111: 261-273.
-
(2000)
Mol Biochem Parasitol
, vol.111
, pp. 261-273
-
-
Melville, S.E.1
Leech, V.2
Navarro, M.3
Cross, G.A.M.4
-
22
-
-
0032168225
-
Selection for activation of a new variant surface glycoprotein gene expression site in Trypanosoma brucei can result in deletion of the old one
-
Rudenko G, Chaves I, Dirks-Mulder A, Borst P (1998) Selection for activation of a new variant surface glycoprotein gene expression site in Trypanosoma brucei can result in deletion of the old one. Mol Biochem Parasitol 95: 97-109.
-
(1998)
Mol Biochem Parasitol
, vol.95
, pp. 97-109
-
-
Rudenko, G.1
Chaves, I.2
Dirks-Mulder, A.3
Borst, P.4
-
23
-
-
0021045630
-
Modifications of a Trypanosoma b. brucei antigen gene repertoire by different DNA recombinational mechanisms
-
Pays E, Delauw MF, Van Assel S, Laurent M, Vervoort T, et al. (1983) Modifications of a Trypanosoma b. brucei antigen gene repertoire by different DNA recombinational mechanisms. Cell 35: 721-731.
-
(1983)
Cell
, vol.35
, pp. 721-731
-
-
Pays, E.1
Delauw, M.F.2
Van Assel, S.3
Laurent, M.4
Vervoort, T.5
-
24
-
-
0031961882
-
Frequent loss of the active site during variant surface glycoprotein expression site switching in vitro in Trypanosoma brucei
-
Cross M, Taylor MC, Borst P (1998) Frequent loss of the active site during variant surface glycoprotein expression site switching in vitro in Trypanosoma brucei. Molecular & Cellular Biology 18: 198-205.
-
(1998)
Molecular & Cellular Biology
, vol.18
, pp. 198-205
-
-
Cross, M.1
Taylor, M.C.2
Borst, P.3
-
26
-
-
0022577541
-
Analysis of antigen switching rates in Trypanosoma brucei
-
Lamont GS, Tucker RS, Cross GAM (1986) Analysis of antigen switching rates in Trypanosoma brucei. Parasitology 92: 355-367.
-
(1986)
Parasitology
, vol.92
, pp. 355-367
-
-
Lamont, G.S.1
Tucker, R.S.2
Cross, G.A.M.3
-
27
-
-
0036069647
-
The architecture of variant surface glycoprotein gene expression sites in Trypanosoma brucei
-
Berriman M, Hall N, Sheader K, Bringaud F, Tiwari B, et al. (2002) The architecture of variant surface glycoprotein gene expression sites in Trypanosoma brucei. Mol Biochem Parasitol 122: 131-140.
-
(2002)
Mol Biochem Parasitol
, vol.122
, pp. 131-140
-
-
Berriman, M.1
Hall, N.2
Sheader, K.3
Bringaud, F.4
Tiwari, B.5
-
28
-
-
0026687783
-
A proposed mechanism for promoter-associated DNA rearrangement events at a variant surface glycoprotein gene expression site
-
Gottesdiener KM, Goriparthi L, Masucci JP, Van der Ploeg LH (1992) A proposed mechanism for promoter-associated DNA rearrangement events at a variant surface glycoprotein gene expression site. Mol Cell Biol 12: 4784-4795.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 4784-4795
-
-
Gottesdiener, K.M.1
Goriparthi, L.2
Masucci, J.P.3
Van der Ploeg, L.H.4
-
29
-
-
0033062624
-
Transcription of 'inactive' expression sites in African trypanosomes leads to expression of multiple transferrin receptor RNAs in bloodstream forms
-
Ansorge I, Steverding D, Melville S, Hartmann C, Clayton C (1999) Transcription of 'inactive' expression sites in African trypanosomes leads to expression of multiple transferrin receptor RNAs in bloodstream forms. Mol Biochem Parasitol 101: 81-94.
-
(1999)
Mol Biochem Parasitol
, vol.101
, pp. 81-94
-
-
Ansorge, I.1
Steverding, D.2
Melville, S.3
Hartmann, C.4
Clayton, C.5
-
30
-
-
34548396688
-
Analysis of the VSG gene silent archive in Trypanosoma brucei reveals that mosaic gene expression is prominent in antigenic variation and is favored by archive substructure
-
Marcello L, Barry JD (2007) Analysis of the VSG gene silent archive in Trypanosoma brucei reveals that mosaic gene expression is prominent in antigenic variation and is favored by archive substructure. Genome Res 17: 1344-1352.
-
(2007)
Genome Res
, vol.17
, pp. 1344-1352
-
-
Marcello, L.1
Barry, J.D.2
-
31
-
-
33748770095
-
Automated phylogenetic detection of recombination using a genetic algorithm
-
Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD (2006) Automated phylogenetic detection of recombination using a genetic algorithm. Mol Biol Evol 23: 1891-1901.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1891-1901
-
-
Kosakovsky Pond, S.L.1
Posada, D.2
Gravenor, M.B.3
Woelk, C.H.4
Frost, S.D.5
-
32
-
-
33646167864
-
A simple and robust statistical test for detecting the presence of recombination
-
Bruen TC, Philippe H, Bryant D (2006) A simple and robust statistical test for detecting the presence of recombination. Genetics 172: 2665-2681.
-
(2006)
Genetics
, vol.172
, pp. 2665-2681
-
-
Bruen, T.C.1
Philippe, H.2
Bryant, D.3
-
33
-
-
0032145092
-
The molecular karyotype of the megabase chromosomes of Trypanosoma brucei and the assignment of chromosome markers
-
Melville SE, Leech V, Gerrard CS, Tait A, Blackwell JM (1998) The molecular karyotype of the megabase chromosomes of Trypanosoma brucei and the assignment of chromosome markers. Molecular & Biochemical Parasitology 94: 155-173.
-
(1998)
Molecular & Biochemical Parasitology
, vol.94
, pp. 155-173
-
-
Melville, S.E.1
Leech, V.2
Gerrard, C.S.3
Tait, A.4
Blackwell, J.M.5
-
34
-
-
33748280640
-
Hemizygous subtelomeres of an African trypanosome chromosome may account for over 75% of chromosome length
-
Callejas S, Leech V, Reitter C, Melville S (2006) Hemizygous subtelomeres of an African trypanosome chromosome may account for over 75% of chromosome length. Genome Res 16: 1109-1118.
-
(2006)
Genome Res
, vol.16
, pp. 1109-1118
-
-
Callejas, S.1
Leech, V.2
Reitter, C.3
Melville, S.4
-
35
-
-
33746440348
-
Chromosome breakage and repair
-
Haber JE (2006) Chromosome breakage and repair. Genetics 173: 1181-1185.
-
(2006)
Genetics
, vol.173
, pp. 1181-1185
-
-
Haber, J.E.1
-
36
-
-
0032423741
-
A VSG expression site-associated gene confers resistance to human serum in Trypanosoma rhodesiense
-
Xong HV, Vanhamme L, Chamekh M, Chimfwembe CE, Van Den Abbeele J, et al. (1998) A VSG expression site-associated gene confers resistance to human serum in Trypanosoma rhodesiense. Cell 95: 839-846.
-
(1998)
Cell
, vol.95
, pp. 839-846
-
-
Xong, H.V.1
Vanhamme, L.2
Chamekh, M.3
Chimfwembe, C.E.4
Van Den Abbeele, J.5
-
37
-
-
0034106940
-
Differential RNA elongation controls the variant surface glycoprotein gene expression sites of Trypanosoma brucei
-
Vanhamme L, Poelvoorde P, Pays A, Tebabi P, Van Xong H, et al. (2000) Differential RNA elongation controls the variant surface glycoprotein gene expression sites of Trypanosoma brucei. Mol Microbiol 36: 328-340.
-
(2000)
Mol Microbiol
, vol.36
, pp. 328-340
-
-
Vanhamme, L.1
Poelvoorde, P.2
Pays, A.3
Tebabi, P.4
Van Xong, H.5
-
38
-
-
26244464871
-
Trypanosomes change their transferrin receptor expression to allow effective uptake of host transferrin
-
van Luenen HG, Kieft R, Mussmann R, Engstler M, ter Riet B, et al. (2005) Trypanosomes change their transferrin receptor expression to allow effective uptake of host transferrin. Mol Microbiol 58: 151-165.
-
(2005)
Mol Microbiol
, vol.58
, pp. 151-165
-
-
van Luenen, H.G.1
Kieft, R.2
Mussmann, R.3
Engstler, M.4
ter Riet, B.5
-
39
-
-
34250863858
-
Trypanosoma brucei homologous recombination is dependent on substrate length and homology, though displays a differential dependence on mismatch repair as substrate length decreases
-
Barnes RL, McCulloch R (2007) Trypanosoma brucei homologous recombination is dependent on substrate length and homology, though displays a differential dependence on mismatch repair as substrate length decreases. Nucleic Acids Res 35: 3478-3493.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 3478-3493
-
-
Barnes, R.L.1
McCulloch, R.2
-
40
-
-
27844507081
-
What the genome sequence is revealing about trypanosome antigenic variation
-
Barry JD, Marcello L, Morrison LJ, Read AF, Lythgoe K, et al. (2005) What the genome sequence is revealing about trypanosome antigenic variation. Biochem Soc Trans 33: 986-989.
-
(2005)
Biochem Soc Trans
, vol.33
, pp. 986-989
-
-
Barry, J.D.1
Marcello, L.2
Morrison, L.J.3
Read, A.F.4
Lythgoe, K.5
-
41
-
-
20844442483
-
Variant surface glycoprotein RNA interference triggers a precytokinesis cell cycle arrest in African trypanosomes
-
Sheader K, Vaughan S, Minchin J, Hughes K, Gull K, et al. (2005) Variant surface glycoprotein RNA interference triggers a precytokinesis cell cycle arrest in African trypanosomes. Proc Natl Acad Sci U S A 102: 8716-8721.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 8716-8721
-
-
Sheader, K.1
Vaughan, S.2
Minchin, J.3
Hughes, K.4
Gull, K.5
-
42
-
-
0030249772
-
Telomere exchange can be an important mechanism of variant surface glycoprotein gene switching in Trypanosoma brucei
-
Rudenko G, McCulloch R, Dirks-Mulder A, Borst P (1996) Telomere exchange can be an important mechanism of variant surface glycoprotein gene switching in Trypanosoma brucei. Mol Biochem Parasitol 80: 65-75.
-
(1996)
Mol Biochem Parasitol
, vol.80
, pp. 65-75
-
-
Rudenko, G.1
McCulloch, R.2
Dirks-Mulder, A.3
Borst, P.4
-
43
-
-
34247506767
-
Tandem gene arrays in Trypanosoma brucei: Comparative phylogenomic analysis of duplicate sequence variation
-
Jackson AP (2007) Tandem gene arrays in Trypanosoma brucei: comparative phylogenomic analysis of duplicate sequence variation. BMC Evol Biol 7: 54.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 54
-
-
Jackson, A.P.1
-
44
-
-
33845605494
-
Telomere structure and function in trypanosomes: A proposal
-
Dreesen O, Li B, Cross GA (2007) Telomere structure and function in trypanosomes: a proposal. Nat Rev Microbiol 5: 70-75.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 70-75
-
-
Dreesen, O.1
Li, B.2
Cross, G.A.3
-
45
-
-
0018791006
-
Selective cleavage of variant surface glycoproteins from Trypanosoma brucei
-
Johnson JG, Cross GA (1979) Selective cleavage of variant surface glycoproteins from Trypanosoma brucei. Biochem J 178: 689-697.
-
(1979)
Biochem J
, vol.178
, pp. 689-697
-
-
Johnson, J.G.1
Cross, G.A.2
-
46
-
-
0024948840
-
Continuous cultivation of Trypanosoma brucei blood stream forms in a medium containing a low concentration of serum protein without feeder cell layers
-
Hirumi H, Hirumi K (1989) Continuous cultivation of Trypanosoma brucei blood stream forms in a medium containing a low concentration of serum protein without feeder cell layers. J Parasitol 75: 985-989.
-
(1989)
J Parasitol
, vol.75
, pp. 985-989
-
-
Hirumi, H.1
Hirumi, K.2
-
47
-
-
0027969338
-
Gene expression mediated by bacteriophage T3 and T7 RNA polymerases in transgenic trypanosomes
-
Wirtz E, Hartmann C, Clayton C (1994) Gene expression mediated by bacteriophage T3 and T7 RNA polymerases in transgenic trypanosomes. Nucleic Acids Res 22: 3887-3894.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3887-3894
-
-
Wirtz, E.1
Hartmann, C.2
Clayton, C.3
-
48
-
-
3242725328
-
Separation, digestion, and cloning of intact parasite chromosomes embedded in agarose
-
Leech V, Quail MA, Melville SE (2004) Separation, digestion, and cloning of intact parasite chromosomes embedded in agarose. Methods Mol Biol 270: 335-352.
-
(2004)
Methods Mol Biol
, vol.270
, pp. 335-352
-
-
Leech, V.1
Quail, M.A.2
Melville, S.E.3
-
49
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, et al. (2000) Artemis: sequence visualization and annotation. Bioinformatics 16: 944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
-
50
-
-
0034201441
-
EMBOSS: The European Molecular Biology Open Software Suite
-
Rice P, Longden I, Bleasby A (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16: 276-277.
-
(2000)
Trends Genet
, vol.16
, pp. 276-277
-
-
Rice, P.1
Longden, I.2
Bleasby, A.3
-
51
-
-
33745447782
-
Telomerase-independent stabilization of short telomeres in Trypanosoma brucei
-
Dreesen O, Cross GA (2006) Telomerase-independent stabilization of short telomeres in Trypanosoma brucei. Mol Cell Biol 26: 4911-4919.
-
(2006)
Mol Cell Biol
, vol.26
, pp. 4911-4919
-
-
Dreesen, O.1
Cross, G.A.2
-
52
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
53
-
-
23144433822
-
PHYML Online-a web server for fast maximum likelihood-based phylogenetic inference
-
Guindon S, Lethiec F, Duroux P, Gascuel O (2005) PHYML Online-a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 33: W557-559.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
54
-
-
0036139287
-
CONSEL: For assessing the confidence of phylogenetic tree selection
-
Shimodaira H, Hasegawa M (2001) CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics 17: 1246-1247.
-
(2001)
Bioinformatics
, vol.17
, pp. 1246-1247
-
-
Shimodaira, H.1
Hasegawa, M.2
-
55
-
-
15844406550
-
HyPhy: Hypothesis testing using phylogenies
-
Pond SL, Frost SD, Muse SV (2005) HyPhy: hypothesis testing using phylogenies. Bioinformatics 21: 676-679.
-
(2005)
Bioinformatics
, vol.21
, pp. 676-679
-
-
Pond, S.L.1
Frost, S.D.2
Muse, S.V.3
-
56
-
-
33749827106
-
Robust inference of positive selection from recombining coding sequences
-
Scheffler K, Martin DP, Seoighe C (2006) Robust inference of positive selection from recombining coding sequences. Bioinformatics 22: 2493-2499.
-
(2006)
Bioinformatics
, vol.22
, pp. 2493-2499
-
-
Scheffler, K.1
Martin, D.P.2
Seoighe, C.3
-
57
-
-
8544225780
-
Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites
-
Wong WS, Yang Z, Goldman N, Nielsen R (2004) Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites. Genetics 168: 1041-1051.
-
(2004)
Genetics
, vol.168
, pp. 1041-1051
-
-
Wong, W.S.1
Yang, Z.2
Goldman, N.3
Nielsen, R.4
-
58
-
-
25144506072
-
VSG switching in Trypanosoma brucei: Antigenic variation analysed using RNAi in the absence of immune selection
-
Aitcheson N, Talbot S, Shapiro J, Hughes K, Adkin C, et al. (2005) VSG switching in Trypanosoma brucei: antigenic variation analysed using RNAi in the absence of immune selection. Mol Microbiol 57: 1608-1622.
-
(2005)
Mol Microbiol
, vol.57
, pp. 1608-1622
-
-
Aitcheson, N.1
Talbot, S.2
Shapiro, J.3
Hughes, K.4
Adkin, C.5
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