-
1
-
-
33845572150
-
Human body fluid proteome analysis
-
Hu, S., Loo, J. A., and Wong, D. T. (2006) Human body fluid proteome analysis. Proteomics 6, 6326-6353
-
(2006)
Proteomics
, vol.6
, pp. 6326-6353
-
-
Hu, S.1
Loo, J.A.2
Wong, D.T.3
-
2
-
-
33747030845
-
Protein biomarker discovery and validation: The long and uncertain path to clinical utility
-
Rifai, N., Gillette, M. A., and Carr, S. A. (2006) Protein biomarker discovery and validation: the long and uncertain path to clinical utility. Nat. Biotechnol. 24, 971-983
-
(2006)
Nat. Biotechnol
, vol.24
, pp. 971-983
-
-
Rifai, N.1
Gillette, M.A.2
Carr, S.A.3
-
3
-
-
0001644020
-
The human plasma proteome: History, character, and diagnostic prospects
-
Anderson, N. L., and Anderson, N. G. (2002) The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell. Proteomics 1, 845-867
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 845-867
-
-
Anderson, N.L.1
Anderson, N.G.2
-
4
-
-
33750728385
-
Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications
-
Qian, W. J., Jacobs, J. M., Liu, T., Camp, D. G., II, and Smith, R. D. (2006) Advances and challenges in liquid chromatography-mass spectrometry-based proteomics profiling for clinical applications. Mol. Cell. Proteomics 5, 1727-1744
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 1727-1744
-
-
Qian, W.J.1
Jacobs, J.M.2
Liu, T.3
Camp II, D.G.4
Smith, R.D.5
-
5
-
-
32044453084
-
Biomarker discovery from the plasma proteome using multidimensional fractionation proteomics
-
Lee, H. J., Lee, E. Y., Kwon, M. S., and Paik, Y. K. (2006) Biomarker discovery from the plasma proteome using multidimensional fractionation proteomics. Curr. Opin. Chem. Biol. 10, 42-49
-
(2006)
Curr. Opin. Chem. Biol
, vol.10
, pp. 42-49
-
-
Lee, H.J.1
Lee, E.Y.2
Kwon, M.S.3
Paik, Y.K.4
-
6
-
-
20844461912
-
Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids
-
Wang, H., Clouthier, S. G., Galchev, V., Misek, D. E., Duffner, U., Min, C. K., Zhao, R., Tra, J., Omenn, G. S., Ferrara, J. L., and Hanash, S. M. (2005) Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids. Mol. Cell. Proteomics 4, 618-625
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 618-625
-
-
Wang, H.1
Clouthier, S.G.2
Galchev, V.3
Misek, D.E.4
Duffner, U.5
Min, C.K.6
Zhao, R.7
Tra, J.8
Omenn, G.S.9
Ferrara, J.L.10
Hanash, S.M.11
-
7
-
-
33750682085
-
Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry
-
Liu, T., Qian, W. J., Mottaz, H. M., Gritsenko, M. A., Norbeck, A. D., Moore, R. J., Purvine, S. O., Camp, D. G., II, and Smith, R. D. (2006) Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry. Mol. Cell. Proteomics 5, 2167-2174
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 2167-2174
-
-
Liu, T.1
Qian, W.J.2
Mottaz, H.M.3
Gritsenko, M.A.4
Norbeck, A.D.5
Moore, R.J.6
Purvine, S.O.7
Camp II, D.G.8
Smith, R.D.9
-
8
-
-
0037387175
-
Multi-component immunoaffinity subtraction chromatography: An innovative step towards a comprehensive survey of the human plasma proteome
-
Pieper, R., Su, Q., Gatlin, C. L., Huang, S. T., Anderson, N. L., and Steiner, S. (2003) Multi-component immunoaffinity subtraction chromatography: an innovative step towards a comprehensive survey of the human plasma proteome. Proteomics 3, 422-432
-
(2003)
Proteomics
, vol.3
, pp. 422-432
-
-
Pieper, R.1
Su, Q.2
Gatlin, C.L.3
Huang, S.T.4
Anderson, N.L.5
Steiner, S.6
-
9
-
-
23944475619
-
Differences among techniques for high-abundant protein depletion
-
Zolotarjova, N., Martosella, J., Nicol, G., Bailey, J., Boyes, B. E., and Barrett, W. C. (2005) Differences among techniques for high-abundant protein depletion. Proteomics 5, 3304-3313
-
(2005)
Proteomics
, vol.5
, pp. 3304-3313
-
-
Zolotarjova, N.1
Martosella, J.2
Nicol, G.3
Bailey, J.4
Boyes, B.E.5
Barrett, W.C.6
-
10
-
-
23944495100
-
Immunoaffinity separation of plasma proteins by IgY microbeads: Meeting the needs of proteomic sample preparation and analysis
-
Huang, L., Harvie, G., Feitelson, J. S., Gramatikoff, K., Herold, D. A., Allen, D. L, Amunngama, R., Hagler, R. A., Pisano, M. R., Zhang, W. W., and Fang, X. (2005) Immunoaffinity separation of plasma proteins by IgY microbeads: meeting the needs of proteomic sample preparation and analysis. Proteomics 5, 3314-3328
-
(2005)
Proteomics
, vol.5
, pp. 3314-3328
-
-
Huang, L.1
Harvie, G.2
Feitelson, J.S.3
Gramatikoff, K.4
Herold, D.A.5
Allen, D.L.6
Amunngama, R.7
Hagler, R.A.8
Pisano, M.R.9
Zhang, W.W.10
Fang, X.11
-
11
-
-
26844561626
-
Effect of immunoaffinity depletion of human serum during proteomic investigations
-
Yocum, A. K., Yu, K., Oe, T., and Blair, I. A. (2005) Effect of immunoaffinity depletion of human serum during proteomic investigations. J. Proteome Res. 4, 1722-1731
-
(2005)
J. Proteome Res
, vol.4
, pp. 1722-1731
-
-
Yocum, A.K.1
Yu, K.2
Oe, T.3
Blair, I.A.4
-
12
-
-
33745090847
-
Depletion efficiency and recovery of trace markers from a multiparameter immunodepletion column
-
Brand, J., Haslberger, T., Zolg, W., Pestlin, G., and Palme, S. (2006) Depletion efficiency and recovery of trace markers from a multiparameter immunodepletion column. Proteomics 6, 3236-3242
-
(2006)
Proteomics
, vol.6
, pp. 3236-3242
-
-
Brand, J.1
Haslberger, T.2
Zolg, W.3
Pestlin, G.4
Palme, S.5
-
13
-
-
14844360847
-
Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: The human proteome
-
Qian, W. J., Liu, T., Monroe, M. E., Strittmatter, E. F., Jacobs, J. M., Kangas, L. J., Petritis, K., Camp, D. G., and Smith, R. D. (2005) Probability-based evaluation of peptide and protein identifications from tandem mass spectrometry and SEQUEST analysis: the human proteome. J. Proteome Res. 4, 53-62
-
(2005)
J. Proteome Res
, vol.4
, pp. 53-62
-
-
Qian, W.J.1
Liu, T.2
Monroe, M.E.3
Strittmatter, E.F.4
Jacobs, J.M.5
Kangas, L.J.6
Petritis, K.7
Camp, D.G.8
Smith, R.D.9
-
14
-
-
33750629023
-
High dynamic range characterization of the trauma patient plasma proteome
-
Liu, T., Qian, W. J., Gritsenko, M. A., Xiao, W., Moldawer, L. L., Kaushal, A., Monroe, M. E., Varnum, S. M., Moore, R. J., Purvine, S. O., Maier, R. V., Davis, R. W., Tompkins, R. G., Camp, D. G., II, and Smith, R. D. (2006) High dynamic range characterization of the trauma patient plasma proteome. Mol. Cell. Proteomics 5, 1899-1913
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 1899-1913
-
-
Liu, T.1
Qian, W.J.2
Gritsenko, M.A.3
Xiao, W.4
Moldawer, L.L.5
Kaushal, A.6
Monroe, M.E.7
Varnum, S.M.8
Moore, R.J.9
Purvine, S.O.10
Maier, R.V.11
Davis, R.W.12
Tompkins, R.G.13
Camp II, D.G.14
Smith, R.D.15
-
15
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
Nesvizhskii, A. I., Keller, A., Kolker, E., and Aebersold, R. (2003) A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 75, 4646-4658
-
(2003)
Anal. Chem
, vol.75
, pp. 4646-4658
-
-
Nesvizhskii, A.I.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
16
-
-
0016559391
-
Analytical techniques for cell fractions. XX. Cyclic affinity chromatography: Principles and applications
-
Anderson, N. G., Willis, D. D., Holladay, D. W., Caton, J. E., Holleman, J. W., Eveleigh, J. W., Attrill, J. E., Ball, F. L., and Anderson, N. L. (1975) Analytical techniques for cell fractions. XX. Cyclic affinity chromatography: principles and applications. Anal. Biochem. 68, 371-393
-
(1975)
Anal. Biochem
, vol.68
, pp. 371-393
-
-
Anderson, N.G.1
Willis, D.D.2
Holladay, D.W.3
Caton, J.E.4
Holleman, J.W.5
Eveleigh, J.W.6
Attrill, J.E.7
Ball, F.L.8
Anderson, N.L.9
-
17
-
-
3242731195
-
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
-
Liu, H., Sadygov, R. G., and Yates, J. R., III (2004) A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal. Chem. 76, 4193-4201
-
(2004)
Anal. Chem
, vol.76
, pp. 4193-4201
-
-
Liu, H.1
Sadygov, R.G.2
Yates III, J.R.3
-
18
-
-
20944449918
-
Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry
-
Qian, W. J., Jacobs, J. M., Camp, II, D. G., Monroe, M. E., Moore, R. J., Gritsenko, M. A., Calvano, S. E., Lowry, S. F., Xiao, W., Moldawer, L. L., Davis, R. W., Tompkins, R. G., and Smith, R. D. (2005) Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry. Proteomics 5, 572-584
-
(2005)
Proteomics
, vol.5
, pp. 572-584
-
-
Qian, W.J.1
Jacobs, J.M.2
Camp II, D.G.3
Monroe, M.E.4
Moore, R.J.5
Gritsenko, M.A.6
Calvano, S.E.7
Lowry, S.F.8
Xiao, W.9
Moldawer, L.L.10
Davis, R.W.11
Tompkins, R.G.12
Smith, R.D.13
-
19
-
-
26444506068
-
Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling
-
Zybailov, B., Coleman, M. K., Florens, L., and Washburn, M. P. (2005) Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling. Anal. Chem. 77, 6218-6224
-
(2005)
Anal. Chem
, vol.77
, pp. 6218-6224
-
-
Zybailov, B.1
Coleman, M.K.2
Florens, L.3
Washburn, M.P.4
-
20
-
-
18344370335
-
Intact-protein based sample preparation strategies for proteome analysis in combination with mass spectrometry
-
Wang, H., and Hanash, S. (2005) Intact-protein based sample preparation strategies for proteome analysis in combination with mass spectrometry. Mass Spectrom. Rev. 24, 413-426
-
(2005)
Mass Spectrom. Rev
, vol.24
, pp. 413-426
-
-
Wang, H.1
Hanash, S.2
-
21
-
-
31644440872
-
Multidimensional liquid chromatography separation of intact proteins by chromatographic focusing and reversed phase of the human serum proteome: Optimization and protein database
-
Sheng, S., Chen, D., and Van Eyk, J. E. (2006) Multidimensional liquid chromatography separation of intact proteins by chromatographic focusing and reversed phase of the human serum proteome: optimization and protein database. Mol. Cell. Proteomics 5, 26-34
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 26-34
-
-
Sheng, S.1
Chen, D.2
Van Eyk, J.E.3
-
22
-
-
38349068918
-
Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution
-
Keshishian, H., Addona, T., Burgess, M., Kuhn, E., and Carr, S. A. (2007) Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution. Mol. Cell. Proteomics 6, 2212-2229
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 2212-2229
-
-
Keshishian, H.1
Addona, T.2
Burgess, M.3
Kuhn, E.4
Carr, S.A.5
-
23
-
-
33645721632
-
Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
-
Anderson, L., and Hunter, C. L. (2006) Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins. Mol. Cell. Proteomics 5, 573-588
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 573-588
-
-
Anderson, L.1
Hunter, C.L.2
-
24
-
-
35348863892
-
High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites
-
Stahl-Zeng, J., Lange, V., Ossola, R., Eckhardt, K., Krek, W., Aebersold, R., and Domon, B. (2007) High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites. Mol. Cell. Proteomics 6, 1809-1817
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1809-1817
-
-
Stahl-Zeng, J.1
Lange, V.2
Ossola, R.3
Eckhardt, K.4
Krek, W.5
Aebersold, R.6
Domon, B.7
-
25
-
-
23944472689
-
Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: Systematic variation between sample types and calibration of mass spectrometry data
-
Haab, B. B., Geierstanger, B. H., Michailidis, G., Vitzthum, F., Forrester, S., Okon, R., Saviranta, P., Brinker, A., Sorette, M., Perlee, L., Suresh, S., Drwal, G., Adkins, J. N., and Omenn, G. S. (2005) Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: systematic variation between sample types and calibration of mass spectrometry data. Proteomics 5, 3278-3291
-
(2005)
Proteomics
, vol.5
, pp. 3278-3291
-
-
Haab, B.B.1
Geierstanger, B.H.2
Michailidis, G.3
Vitzthum, F.4
Forrester, S.5
Okon, R.6
Saviranta, P.7
Brinker, A.8
Sorette, M.9
Perlee, L.10
Suresh, S.11
Drwal, G.12
Adkins, J.N.13
Omenn, G.S.14
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