-
1
-
-
0034973280
-
Protein function at thermal extremes: balancing stability and flexibility
-
Fields P.A. Protein function at thermal extremes: balancing stability and flexibility. Comp. Biochem. Physiol. A. Mol. Integr. Physiol. 129 (2001) 417-431
-
(2001)
Comp. Biochem. Physiol. A. Mol. Integr. Physiol.
, vol.129
, pp. 417-431
-
-
Fields, P.A.1
-
2
-
-
0141596172
-
Structural and functional adaptations to extreme temperatures in psychrophilic, mesophilic, and thermophilic DNA ligases
-
Georlette D., Damien B., Blaise V., Depiereux E., Uversky V.N., Gerday C., and Feller G. Structural and functional adaptations to extreme temperatures in psychrophilic, mesophilic, and thermophilic DNA ligases. J. Biol. Chem. 278 (2003) 37015-37023
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 37015-37023
-
-
Georlette, D.1
Damien, B.2
Blaise, V.3
Depiereux, E.4
Uversky, V.N.5
Gerday, C.6
Feller, G.7
-
3
-
-
0026320508
-
Protein stability and molecular adaptation to extreme conditions
-
Jaenicke R. Protein stability and molecular adaptation to extreme conditions. Eur. J. Biochem. 202 (1991) 715-728
-
(1991)
Eur. J. Biochem.
, vol.202
, pp. 715-728
-
-
Jaenicke, R.1
-
4
-
-
0023557882
-
Relationship of protein flexibility to thermostability
-
Vihinen M. Relationship of protein flexibility to thermostability. Protein Eng. 1 (1987) 477-480
-
(1987)
Protein Eng.
, vol.1
, pp. 477-480
-
-
Vihinen, M.1
-
5
-
-
0032560505
-
Adjustment of conformational flexibility is a key event in the thermal adaptation of proteins
-
Zavodszky P., Kardos J., Svingor A., and Petsko G.A. Adjustment of conformational flexibility is a key event in the thermal adaptation of proteins. Proc. Natl. Acad. Sci. U. S. A. 95 (1998) 7406-7411
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 7406-7411
-
-
Zavodszky, P.1
Kardos, J.2
Svingor, A.3
Petsko, G.A.4
-
6
-
-
50449103099
-
Adjustment of conformational flexibility of glyceraldehyde-3-phosphate dehydrogenase as a means of thermal adaptation and allosteric regulation
-
Hajdu I., Bothe C., Szilagyi A., Kardos J., Gal P., and Zavodszky P. Adjustment of conformational flexibility of glyceraldehyde-3-phosphate dehydrogenase as a means of thermal adaptation and allosteric regulation. Eur. Biophys. J. (2008)
-
(2008)
Eur. Biophys. J.
-
-
Hajdu, I.1
Bothe, C.2
Szilagyi, A.3
Kardos, J.4
Gal, P.5
Zavodszky, P.6
-
7
-
-
0034620512
-
Improving the catalytic activity of a thermophilic enzyme at low temperatures
-
Merz A., Yee M.C., Szadkowski H., Pappenberger G., Crameri A., Stemmer W.P., Yanofsky C., and Kirschner K. Improving the catalytic activity of a thermophilic enzyme at low temperatures. Biochemistry 39 (2000) 880-889
-
(2000)
Biochemistry
, vol.39
, pp. 880-889
-
-
Merz, A.1
Yee, M.C.2
Szadkowski, H.3
Pappenberger, G.4
Crameri, A.5
Stemmer, W.P.6
Yanofsky, C.7
Kirschner, K.8
-
8
-
-
4744343045
-
Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair
-
Wolf-Watz M., Thai V., Henzler-Wildman K., Hadjipavlou G., Eisenmesser E.Z., and Kern D. Linkage between dynamics and catalysis in a thermophilic-mesophilic enzyme pair. Nat. Struct. Mol. Biol. 11 (2004) 945-949
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 945-949
-
-
Wolf-Watz, M.1
Thai, V.2
Henzler-Wildman, K.3
Hadjipavlou, G.4
Eisenmesser, E.Z.5
Kern, D.6
-
9
-
-
0032438190
-
The stability of proteins in extreme environments
-
Jaenicke R., and Bohm G. The stability of proteins in extreme environments. Curr. Opin. Struct. Biol. 8 (1998) 738-748
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 738-748
-
-
Jaenicke, R.1
Bohm, G.2
-
10
-
-
0035098779
-
Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability
-
Vieille C., and Zeikus G.J. Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability. Microbiol. Mol. Biol. Rev. 65 (2001) 1-43
-
(2001)
Microbiol. Mol. Biol. Rev.
, vol.65
, pp. 1-43
-
-
Vieille, C.1
Zeikus, G.J.2
-
11
-
-
0034981542
-
Structural basis of thermostability in hyperthermophilic proteins, or "there's more than one way to skin a cat"
-
Petsko G.A. Structural basis of thermostability in hyperthermophilic proteins, or "there's more than one way to skin a cat". Methods Enzymol. 334 (2001) 469-478
-
(2001)
Methods Enzymol.
, vol.334
, pp. 469-478
-
-
Petsko, G.A.1
-
12
-
-
0016505899
-
The stability of globular proteins
-
Pace C.N. The stability of globular proteins. CRC Crit. Rev. Biochem. 3 (1975) 1-43
-
(1975)
CRC Crit. Rev. Biochem.
, vol.3
, pp. 1-43
-
-
Pace, C.N.1
-
13
-
-
0018588511
-
Stability of proteins: small globular proteins
-
Privalov P.L. Stability of proteins: small globular proteins. Adv. Protein Chem. 33 (1979) 167-241
-
(1979)
Adv. Protein Chem.
, vol.33
, pp. 167-241
-
-
Privalov, P.L.1
-
14
-
-
0025019350
-
Conformational stability of globular proteins
-
Pace C.N. Conformational stability of globular proteins. Trends Biochem. Sci. 15 (1990) 14-17
-
(1990)
Trends Biochem. Sci.
, vol.15
, pp. 14-17
-
-
Pace, C.N.1
-
15
-
-
0008863560
-
Some factors in the interpretation of protein denaturation
-
Kauzmann W. Some factors in the interpretation of protein denaturation. Adv. Protein Chem. 14 (1959) 1-63
-
(1959)
Adv. Protein Chem.
, vol.14
, pp. 1-63
-
-
Kauzmann, W.1
-
16
-
-
0014364651
-
Protein denaturation
-
Tanford C. Protein denaturation. Adv. Protein Chem. 23 (1968) 121-282
-
(1968)
Adv. Protein Chem.
, vol.23
, pp. 121-282
-
-
Tanford, C.1
-
17
-
-
0014604482
-
Thermodynamics of the denaturation of lysozyme by guanidine hydrochloride. II. Dependence on denaturant concentration at 25 degrees
-
Aune K.C., and Tanford C. Thermodynamics of the denaturation of lysozyme by guanidine hydrochloride. II. Dependence on denaturant concentration at 25 degrees. Biochemistry 8 (1969) 4586-4590
-
(1969)
Biochemistry
, vol.8
, pp. 4586-4590
-
-
Aune, K.C.1
Tanford, C.2
-
18
-
-
0014718113
-
Protein denaturation. C. Theoretical models for the mechanism of denaturation
-
Tanford C. Protein denaturation. C. Theoretical models for the mechanism of denaturation. Adv. Protein Chem. 24 (1970) 1-95
-
(1970)
Adv. Protein Chem.
, vol.24
, pp. 1-95
-
-
Tanford, C.1
-
19
-
-
0022555885
-
Determination and analysis of urea and guanidine hydrochloride denaturation curves
-
Pace C.N. Determination and analysis of urea and guanidine hydrochloride denaturation curves. Methods Enzymol. 131 (1986) 266-280
-
(1986)
Methods Enzymol.
, vol.131
, pp. 266-280
-
-
Pace, C.N.1
-
20
-
-
0020668139
-
Regulation, genetics, and properties of adenylosuccinate synthetase: a review
-
Stayton M.M., Rudolph F.B., and Fromm H.J. Regulation, genetics, and properties of adenylosuccinate synthetase: a review. Curr. Top. Cell Regul. 22 (1983) 103-141
-
(1983)
Curr. Top. Cell Regul.
, vol.22
, pp. 103-141
-
-
Stayton, M.M.1
Rudolph, F.B.2
Fromm, H.J.3
-
22
-
-
35848952308
-
Kinetic characterization of adenylosuccinate synthetase from the thermophilic archaea Methanocaldococcus jannaschii
-
Mehrotra S., and Balaram H. Kinetic characterization of adenylosuccinate synthetase from the thermophilic archaea Methanocaldococcus jannaschii. Biochemistry 46 (2007) 12821-12832
-
(2007)
Biochemistry
, vol.46
, pp. 12821-12832
-
-
Mehrotra, S.1
Balaram, H.2
-
23
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
24
-
-
0029034945
-
Identification of an essential second metal ion in the reaction mechanism of Escherichia coli adenylosuccinate synthetase
-
Kang C., and Fromm H.J. Identification of an essential second metal ion in the reaction mechanism of Escherichia coli adenylosuccinate synthetase. J. Biol. Chem. 270 (1995) 15539-15544
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 15539-15544
-
-
Kang, C.1
Fromm, H.J.2
-
25
-
-
0014938166
-
Studies on the substrates of D-fructose 1,6-diphosphate aldolase in solution
-
Gray G.R., and Barker R. Studies on the substrates of D-fructose 1,6-diphosphate aldolase in solution. Biochemistry 9 (1970) 2454-2462
-
(1970)
Biochemistry
, vol.9
, pp. 2454-2462
-
-
Gray, G.R.1
Barker, R.2
-
27
-
-
0024970988
-
Conformational stability and mechanism of folding of ribonuclease T1
-
Thompson J., Shirley B., Grimsley G., and Pace C.N. Conformational stability and mechanism of folding of ribonuclease T1. J. Biol. Chem. 264 (1989) 11614-11620
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 11614-11620
-
-
Thompson, J.1
Shirley, B.2
Grimsley, G.3
Pace, C.N.4
-
28
-
-
0001452795
-
Enzymatic synthesis of adenosine-5'-phosphate from inosine-5'-phosphate
-
Lieberman I. Enzymatic synthesis of adenosine-5'-phosphate from inosine-5'-phosphate. J. Biol. Chem. 223 (1956) 327-339
-
(1956)
J. Biol. Chem.
, vol.223
, pp. 327-339
-
-
Lieberman, I.1
-
29
-
-
0021747698
-
The mechanism of the adenylosuccinate synthetase reaction as studied by positional isotope exchange
-
Bass M.B., Fromm H.J., and Rudolph F.B. The mechanism of the adenylosuccinate synthetase reaction as studied by positional isotope exchange. J. Biol. Chem. 259 (1984) 12330-12333
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 12330-12333
-
-
Bass, M.B.1
Fromm, H.J.2
Rudolph, F.B.3
-
30
-
-
0028916224
-
Rapid quench kinetic analysis of polymerases, adenosinetriphosphates, and enzyme intermediates
-
Johnson K.A. Rapid quench kinetic analysis of polymerases, adenosinetriphosphates, and enzyme intermediates. Methods Enzymol. 249 (1995) 38-61
-
(1995)
Methods Enzymol.
, vol.249
, pp. 38-61
-
-
Johnson, K.A.1
-
32
-
-
0015057050
-
A new basis for interpreting the circular dichroic spectra of proteins
-
Saxena V.P., and Wetlaufer D.B. A new basis for interpreting the circular dichroic spectra of proteins. Proc. Natl. Acad. Sci. U. S. A. 68 (1971) 969-972
-
(1971)
Proc. Natl. Acad. Sci. U. S. A.
, vol.68
, pp. 969-972
-
-
Saxena, V.P.1
Wetlaufer, D.B.2
-
33
-
-
0018064266
-
Conformational stability of lactate dehydrogenase from Bacillus thermus-aquaticus
-
Lakatos S., Halasz G., and Zavodszky P. Conformational stability of lactate dehydrogenase from Bacillus thermus-aquaticus. Biochem. Soc. Trans. 6 (1978) 1195-1197
-
(1978)
Biochem. Soc. Trans.
, vol.6
, pp. 1195-1197
-
-
Lakatos, S.1
Halasz, G.2
Zavodszky, P.3
-
34
-
-
0032537480
-
The pyruvate dehydrogenase complex from thermophilic organisms: thermal stability and re-association from the enzyme components
-
Witzmann S., and Bisswanger H. The pyruvate dehydrogenase complex from thermophilic organisms: thermal stability and re-association from the enzyme components. Biochim. Biophys. Acta 1385 (1998) 341-352
-
(1998)
Biochim. Biophys. Acta
, vol.1385
, pp. 341-352
-
-
Witzmann, S.1
Bisswanger, H.2
-
35
-
-
0033519723
-
Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase
-
Kohen A., Cannio R., Bartolucci S., and Klinman J.P. Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase. Nature 399 (1999) 496-499
-
(1999)
Nature
, vol.399
, pp. 496-499
-
-
Kohen, A.1
Cannio, R.2
Bartolucci, S.3
Klinman, J.P.4
-
36
-
-
0025182490
-
Extremely thermostable D-glyceraldehyde-3-phosphate dehydrogenase from the eubacterium Thermotoga maritima
-
Wrba A., Schweiger A., Schultes V., Jaenicke R., and Zavodsky P. Extremely thermostable D-glyceraldehyde-3-phosphate dehydrogenase from the eubacterium Thermotoga maritima. Biochemistry 29 (1990) 7584-7592
-
(1990)
Biochemistry
, vol.29
, pp. 7584-7592
-
-
Wrba, A.1
Schweiger, A.2
Schultes, V.3
Jaenicke, R.4
Zavodsky, P.5
-
37
-
-
29244442623
-
bph genes of the thermophilic PCB degrader, Bacillus sp. JF8: characterization of the divergent ring-hydroxylating dioxygenase and hydrolase genes upstream of the Mn-dependent BphC
-
Mukerjee-Dhar G., Shimura M., Miyazawa D., Kimbara K., and Hatta T. bph genes of the thermophilic PCB degrader, Bacillus sp. JF8: characterization of the divergent ring-hydroxylating dioxygenase and hydrolase genes upstream of the Mn-dependent BphC. Microbiology 151 (2005) 4139-4151
-
(2005)
Microbiology
, vol.151
, pp. 4139-4151
-
-
Mukerjee-Dhar, G.1
Shimura, M.2
Miyazawa, D.3
Kimbara, K.4
Hatta, T.5
-
38
-
-
0014969156
-
Conformational changes in rabbit muscle aldolase. Kinetic studies
-
Lehrer G.M., and Barker R. Conformational changes in rabbit muscle aldolase. Kinetic studies. Biochemistry 9 (1970) 1533-1540
-
(1970)
Biochemistry
, vol.9
, pp. 1533-1540
-
-
Lehrer, G.M.1
Barker, R.2
-
40
-
-
0014027517
-
A temperature-dependent conformational change in D-amino acid oxidase and its effect on catalysis
-
Massey V., Curti B., and Ganther H. A temperature-dependent conformational change in D-amino acid oxidase and its effect on catalysis. J. Biol. Chem. 241 (1966) 2347-2357
-
(1966)
J. Biol. Chem.
, vol.241
, pp. 2347-2357
-
-
Massey, V.1
Curti, B.2
Ganther, H.3
-
41
-
-
0019000671
-
The causes of sharply bent or discontinuous Arrhenius plots for enzyme-catalyzed reactions
-
Londesborough J. The causes of sharply bent or discontinuous Arrhenius plots for enzyme-catalyzed reactions. Eur. J. Biochem. 105 (1980) 211-215
-
(1980)
Eur. J. Biochem.
, vol.105
, pp. 211-215
-
-
Londesborough, J.1
-
42
-
-
27744499156
-
Intrinsic dynamics of an enzyme underlies catalysis
-
Eisenmesser E.Z., Millet O., Labeikovsky W., Korzhnev D.M., Wolf-Watz M., Bosco D.A., Skalicky J.J., Kay L.E., and Kern D. Intrinsic dynamics of an enzyme underlies catalysis. Nature 438 (2005) 117-121
-
(2005)
Nature
, vol.438
, pp. 117-121
-
-
Eisenmesser, E.Z.1
Millet, O.2
Labeikovsky, W.3
Korzhnev, D.M.4
Wolf-Watz, M.5
Bosco, D.A.6
Skalicky, J.J.7
Kay, L.E.8
Kern, D.9
-
45
-
-
43849102169
-
Remote mutations and active site dynamics correlate with catalytic properties of purine nucleoside phosphorylase
-
Saen-Oon S., Ghanem M., Schramm V.L., and Schwartz S.D. Remote mutations and active site dynamics correlate with catalytic properties of purine nucleoside phosphorylase. Biophys. J. 94 (2008) 4078-4088
-
(2008)
Biophys. J.
, vol.94
, pp. 4078-4088
-
-
Saen-Oon, S.1
Ghanem, M.2
Schramm, V.L.3
Schwartz, S.D.4
-
46
-
-
4344642067
-
Protein motions promote catalysis
-
Tousignant A., and Pelletier J.N. Protein motions promote catalysis. Chem. Biol. 11 (2004) 1037-1042
-
(2004)
Chem. Biol.
, vol.11
, pp. 1037-1042
-
-
Tousignant, A.1
Pelletier, J.N.2
-
47
-
-
0030596129
-
Crystal structures of adenylosuccinate synthetase from Escherichia coli complexed with GDP, IMP hadacidin, NO3-, and Mg2+
-
Poland B.W., Fromm H.J., and Honzatko R.B. Crystal structures of adenylosuccinate synthetase from Escherichia coli complexed with GDP, IMP hadacidin, NO3-, and Mg2+. J. Mol. Biol. 264 (1996) 1013-1027
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 1013-1027
-
-
Poland, B.W.1
Fromm, H.J.2
Honzatko, R.B.3
-
48
-
-
0037178842
-
IMP, GTP, and 6-phosphoryl-IMP complexes of recombinant mouse muscle adenylosuccinate synthetase
-
Iancu C.V., Borza T., Fromm H.J., and Honzatko R.B. IMP, GTP, and 6-phosphoryl-IMP complexes of recombinant mouse muscle adenylosuccinate synthetase. J. Biol. Chem. 277 (2002) 26779-26787
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 26779-26787
-
-
Iancu, C.V.1
Borza, T.2
Fromm, H.J.3
Honzatko, R.B.4
-
49
-
-
0031580199
-
Protein thermal stability, hydrogen bonds, and ion pairs
-
Vogt G., Woell S., and Argos P. Protein thermal stability, hydrogen bonds, and ion pairs. J. Mol. Biol. 269 (1997) 631-643
-
(1997)
J. Mol. Biol.
, vol.269
, pp. 631-643
-
-
Vogt, G.1
Woell, S.2
Argos, P.3
-
50
-
-
0035448574
-
Ion pairs and the thermotolerance of proteins from hyperthermophiles: a "traffic rule" for hot roads
-
Karshikoff A., and Ladenstein R. Ion pairs and the thermotolerance of proteins from hyperthermophiles: a "traffic rule" for hot roads. Trends Biochem. Sci. 26 (2001) 550-556
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 550-556
-
-
Karshikoff, A.1
Ladenstein, R.2
-
51
-
-
0027170773
-
Characterization of two novel single-stranded DNA-specific autonomously replicating sequence-binding proteins from Saccharomyces cerevisiae, one of which is adenylosuccinate synthetase
-
Zeidler R., Hobert O., Johannes L., Faulhammer H., and Krauss G. Characterization of two novel single-stranded DNA-specific autonomously replicating sequence-binding proteins from Saccharomyces cerevisiae, one of which is adenylosuccinate synthetase. J. Biol. Chem. 268 (1993) 20191-20197
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 20191-20197
-
-
Zeidler, R.1
Hobert, O.2
Johannes, L.3
Faulhammer, H.4
Krauss, G.5
-
52
-
-
0003845223
-
-
DeLano Scientific, Palo Alto, CA, USA http://www.pymol.org
-
DeLano W.L. The PyMOL Molecular Graphics System (2002), DeLano Scientific, Palo Alto, CA, USA. http://www.pymol.org http://www.pymol.org
-
(2002)
The PyMOL Molecular Graphics System
-
-
DeLano, W.L.1
|