Colander: A probability-based support vector machine algorithm for automatic screening for CID spectra of phosphopeptides prior to database search

Journal of Proteome Research

Volumn 7, Issue 8, 2008, Pages 3628-3634

  Lu, Bingwen ^a   Ruse, Cristian I ^a   Yates III, John R ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

Phosphopeptide; Protein phosphorylation; Support vector machine; Tandem mass spectrometry

Indexed keywords

PHOSPHOPEPTIDE; SACCHAROMYCES CEREVISIAE PROTEIN;

ANIMAL CELL; ARTICLE; COLLISIONALLY ACTIVATED DISSOCIATION; CONTROLLED STUDY; HUMAN; HUMAN CELL; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN PHOSPHORYLATION; RAT; SUPPORT VECTOR MACHINE; TANDEM MASS SPECTROMETRY; ALGORITHM; AUTOMATED PATTERN RECOGNITION; FACTUAL DATABASE; METABOLISM; PHOSPHORYLATION; PROBABILITY; SACCHAROMYCES CEREVISIAE;

ALGORITHMS; CHROMATOGRAPHY, LIQUID; DATABASES, FACTUAL; PATTERN RECOGNITION, AUTOMATED; PHOSPHOPEPTIDES; PHOSPHORYLATION; PROBABILITY; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TANDEM MASS SPECTROMETRY;

EID: 53049103583     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr8001194     Document Type: Article

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