Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry

Analytical Chemistry

Volumn 76, Issue 10, 2004, Pages 2763-2772

  Brill, Laurence M ^a   Salomon, Arthur R ^a   Ficarro, Scott B ^a   Mukherji, Mridul ^b   Stettler Gill, Michelle ^a   Peters, Eric C ^a  

^a GENOMICS INSTITUTE OF THE NOVARTIS RESEARCH FOUNDATION   (United States)

^b SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AFFINITY CHROMATOGRAPHY; AMINO ACIDS; IMMUNOLOGY; LIQUID CHROMATOGRAPHY; PRECIPITATION (CHEMICAL); PROTEINS;

CELL SIGNALING; EUKARYOTES; HUMAN CELLS;

CELLS;

CELL PROTEIN; PEPTIDE; TYROSINE;

ARTICLE; COMPLEX FORMATION; HUMAN; HUMAN CELL; IMMOBILIZED METAL AFFINITY CHROMATOGRAPHY; IMMUNOPRECIPITATION; METHODOLOGY; PROTEIN ANALYSIS; PROTEIN PHOSPHORYLATION; PROTEOMICS; SIGNAL TRANSDUCTION; T LYMPHOCYTE; TANDEM MASS SPECTROMETRY;

CELLS, CULTURED; CHROMATOGRAPHY, AFFINITY; HUMANS; MASS SPECTROMETRY; METALS; METHYLATION; PHOSPHOPEPTIDES; PHOSPHORYLATION; PRECIPITIN TESTS; PROTEINS; PROTEOMICS; SALTS; T-LYMPHOCYTES; TIME FACTORS; TYROSINE;

EID: 2442658049     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac035352d     Document Type: Article

References (24)

1. Mann, M.; Ong, S. E.; Gronborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Trends Biotechnol. 2002, 20, 261-268.
2. Manning, G.; Whyte, D. B.; Martinez, R.; Hunter, T.; Sudarsanam, S. Science 2002, 298, 1912-1934.
3. Schlessinger, J. Cell 2000, 103, 211-225.
4. Pawson, T.; Nash, P. Science 2003, 300, 445-452.
5. Schlessinger, J.; Lemmon, M. A. Sci. STKE 2003, 2003, RE12.
6. Salomon, A. R.; Ficarro, S. B.; Brill, L. M.; Brinker, A.; Phung, Q. T.; Ericson, C.; Sauer, K.; Brock, A.; Horn, D. M.; Schultz, P. G.; Peters, E. C. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 443-448.
7. Pandey, A.; Andersen, J. S.; Mann, M. Sci. STKE 2000, 2000, PL1.
8. Ficarro, S. B.; McCleland, M. L.; Stukenberg, P. T.; Burke, D. J.; Ross, M. M.; Shabanowitz, J.; Hunt, D. F.; White, F. M. Nat. Biotechnol. 2002, 20, 301-305.
9. Gygi, S. P.; Corthals, G. L.; Zhang, Y.; Rochon, Y.; Aebersold, R. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 9390-9395.
10. Boyle, W. J.; van der Geer, P.; Hunter, T. Methods Enzymol. 1991, 201, 110-149.
11. Aebersold, R. H.; Leavitt, J.; Saavedra, R. A.; Hood, L. E.; Kent, S. B. Proc. Natl. Acad. Sci. U.S.A. 1987, 84, 6970-6974.
12. Marcus, K; Moebius, J.; Meyer, H. E. Anal. Bioanal. Chem. 2003, 376, 973-993.
13. Posewitz, M. C.; Tempst, P. Anal. Chem. 1999, 71, 2883-2892.
14. Zarling, A. L.; Ficarro, S. B.; White, F. M.; Shabanowitz, J.; Hunt, D. F.; Engelhard, V. H. J. Exp. Med. 2000, 192, 1755-1762.
15. Ficarro, S.; Chertihin, O.; Westbrook, V. A.; White, F.; Jayes, F.; Kalab, P.; Marto, J. A.; Shabanowitz, J.; Herr, J. C.; Hunt, D. F.; Visconti, P. E. J. Biol. Chem. 2003, 278, 11579-11589.
16. Haydon, C. E.; Eyers, P. A.; Aveline-Wolf, L. D.; Resing, K. A.; Maller, J. L.; Ahn, N. G. Mol. Cell Proteomics 2003, 1055-1067.
17. Nühse, T. S.; Stensballe, A.; Jensen, O. N.; Peck, S. C. Mol. Cell Proteomics 2003, 1234-1243.
18. Shu, H.; Chen, S.; Bi, Q.; Mumby, M.; Brekken, D. L. Mol. Cell Proteomics 2004, 279-286.
19. Cooper, J. A.; Sefton, B. M.; Hunter, T. Methods Enzymol. 1983, 99, 387-402.
20. Pandey, A.; Podtelejnikov, A. V.; Blagoev, B.; Bustelo, X. R.; Mann, M.; Lodish, H. F. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 179-184.
21. Hunt, D. F.; Yates, J. R., 3rd; Shabanowitz, J.; Winston, S.; Hauer, C. R. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 6233-6237.
22. Secrist, J. P.; Burns, L. A.; Karnitz, L.; Koretzky, G. A.; Abraham, R. T. J. Biol. Chem. 1993, 268, 5886-5893.
23. Martin, S. E.; Shabanowitz, J.; Hunt, D. F.; Marto, J. A. Anal. Chem. 2000, 72, 4266-4274.
24. Eng, J.; McCormack, A.; Yates, J. R. J. Am. Soc. Mass Spec. 1994, 5, 976-989.