Bioinformatic identification of the most ancient copper protein architecture

Journal of Biomolecular Structure and Dynamics

Volumn 26, Issue 2, 2008, Pages 197-201

  Ji, Hong Fang ^a   Zhang, Hong Yu ^a  

^a SHANDONG UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

Copper protein; Evolution; Fold; Origin of life; Power law

Indexed keywords

COPPER PROTEIN; CYSTEINE; HISTIDINE; METHIONINE;

ARTICLE; BIOINFORMATICS; CHRONOLOGY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN STRUCTURE;

EID: 52249109583     PISSN: 07391102     EISSN: 15380254     Source Type: Journal    
DOI: 10.1080/07391102.2008.10507235     Document Type: Article

References (23)

1. Lippard, S. J., and Berg, J. M., 1994. Principles of Bioinorganic Chemistry. University Science Books.
2. Radisky, D., and Kaplan, J., 1999. J Biol Chem, 274:4481–4484.
3. Harris, E. D., 2000. Annu Rev Nutr, 20:291–310.
4. Huffman, D. L., and O'Halloran, T. V., 2001. Annu Rev Biochem, 70:677–701.
5. Finney, L. A., and O'Halloran, T. V., 2003. Science, 300:931–936.
6. Kim, B.-E., Nevitt, T., and Thiele, D. J., 2008. Nat Chem Biol, 4:176–185.
7. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E., 2000. Nucleic Acids Res, 28:235–242.
8. Murzin, A. G., Brenner, S. E., Hubbard, T., and Chothia, C., 1995. J Mol Biol, 247:536–540.
9. Andreeva, A., Howorth, D., Chandonia, J. M., Brenner, S. E., Hubbard, T. J. P., Chothia, C., and Murzin, A. G., 2008. Nucleic Acids Res, 36:D419–D425.
10. Rose, G. D., 1979. J Mol Biol, 134:447–470.
11. Bairoch, A., and Apweiler, R., 1999. Nucleic Acids Res, 27:49–54.
12. Koonin, E. V., Wolf, Y. I., and Karev, G. P., 2002. Nature, 420:218–223.
13. Ma, B. G., Chen, L., Ji, H. F., Chen, Z. H., Yang, F. R., Wang, L., Qu, G., Jiang, Y. Y., Ji, C., and Zhang, H. Y., 2008. Biochem Biophys Res Commun, 366:607–611.
14. Ji, H. F., Chen, L., and Zhang, H. Y., 2008. BioEssays, 30 in press
15. Caetano-Anollés, G., and Caetano-Anollés, D., 2003. Genome Res, 13:1563–1571.
16. Caetano-Anollés, G., and Caetano-Anollés, D., 2005. J Mol Evol, 60:484–498.
17. Wang, M., Boca, S. M., Kalelkar, R., Mittenthal, J. E., and Caetano-Anollés, G., 2006. Complexity, 12:27–40.
18. Kasampalidis, I. N., Pitas, I., and Lyroudia, K., 2007. Proteins, 68:123–130.
19. Weber, A. L., and Miller, S. L., 1981. J Mol Evol, 17:273–284.
20. Plankensteiner, K., Reiner, H., and Rode, B. M., 2006. Mol Divers, 10:3–7.
21. Kobayashi, K., Tsuchiya, M., Oshima, T., and Yanagawa, H., 1990. Orig Life Evol Biosph, 20:99–109.
22. Kobayashi, K., Kaneko, T., Saito, T., and Oshima, T., 1998. Orig Life Evol Biosph, 28:155–165.
23. Zhang, H. Y., 2007. Biochem Biophys Res Commun, 359:403–405.