메뉴 건너뛰기




Volumn 66, Issue 1, 2008, Pages 167-180

Functional robustness and gene pools of a wastewater nitrification reactor: Comparison of dispersed and intact biofilms when stressed by low oxygen and low pH

Author keywords

amoA; Biofilm; Denitrification; Nitrification; Wastewater treatment

Indexed keywords

NITROGEN; NITROGEN DIOXIDE; OXYGEN;

EID: 51649123815     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2008.00532.x     Document Type: Conference Paper
Times cited : (9)

References (42)
  • 1
    • 0021742943 scopus 로고
    • Bicarbonate uptake by nitrifiers: Effects of growth rate, pH, substrate concentration, and metabolic inhibitors
    • Belser LW (1984) Bicarbonate uptake by nitrifiers: effects of growth rate, pH, substrate concentration, and metabolic inhibitors. Appl Environ Microbiol 48 : 1100 1104.
    • (1984) Appl Environ Microbiol , vol.48 , pp. 1100-1104
    • Belser, L.W.1
  • 2
    • 45149123232 scopus 로고    scopus 로고
    • Transcription and activities of NO(x) reductases in Agrobacterium tumefaciens: The influence of nitrate, nitrite and oxygen availability
    • DOI:.
    • Bergaust L, Shapleigh J, Frostegard A Bakken L (2008) Transcription and activities of NO(x) reductases in Agrobacterium tumefaciens: the influence of nitrate, nitrite and oxygen availability. Environ Microbiol DOI :.
    • (2008) Environ Microbiol
    • Bergaust, L.1    Shapleigh, J.2    Frostegard, A.3    Bakken, L.4
  • 3
    • 39749184064 scopus 로고    scopus 로고
    • Partial nitrification to nitrite using low dissolved oxygen concentration as the main selection factor
    • Blackburne R, Yuan Z Keller J (2007) Partial nitrification to nitrite using low dissolved oxygen concentration as the main selection factor. Biodegradation 19 : 303 312.
    • (2007) Biodegradation , vol.19 , pp. 303-312
    • Blackburne, R.1    Yuan, Z.2    Keller, J.3
  • 4
    • 0031687820 scopus 로고    scopus 로고
    • Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples
    • Braker G, Fesefeldt A Witzel KP (1998) Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples. Appl Environ Microbiol 64 : 3769 3775.
    • (1998) Appl Environ Microbiol , vol.64 , pp. 3769-3775
    • Braker, G.1    Fesefeldt, A.2    Witzel, K.P.3
  • 5
    • 0000286531 scopus 로고
    • An ordination of the upland forest communities of southern Wisconsin
    • Bray JR Curtis JT (1957) An ordination of the upland forest communities of southern Wisconsin. Ecol Monogr 27 : 326 349.
    • (1957) Ecol Monogr , vol.27 , pp. 326-349
    • Bray, J.R.1    Curtis, J.T.2
  • 6
    • 0037408431 scopus 로고    scopus 로고
    • Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea
    • Chain P, Lamerdin J, Larimer F et al 2003) Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea. J Bacteriol 185 : 6496 6496.
    • (2003) J Bacteriol , vol.185 , pp. 6496-6496
    • Chain, P.1    Lamerdin, J.2    Larimer, F.3    Al, E.4
  • 7
    • 13444304367 scopus 로고    scopus 로고
    • The Ribosomal Database Project (RDP-II): Sequences and tools for high-throughput rRNA analysis
    • Cole JR, Chai B, Farris RJ et al 2005) The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res 33 : D294 D296.
    • (2005) Nucleic Acids Res , vol.33
    • Cole, J.R.1    Chai, B.2    Farris, R.J.3    Al, E.4
  • 8
    • 0024926908 scopus 로고
    • A dilute medium to determine population-size of ammonium oxidizers in forest soils
    • Donaldson JM Henderson GS (1989) A dilute medium to determine population-size of ammonium oxidizers in forest soils. Soil Sci Soc Am J 53 : 1608 1611.
    • (1989) Soil Sci Soc Am J , vol.53 , pp. 1608-1611
    • Donaldson, J.M.1    Henderson, G.S.2
  • 9
    • 0035084619 scopus 로고    scopus 로고
    • Enrichment and characterization of an anammox bacterium from a rotating biological contactor treating ammonium-rich leachate
    • RDPquery: A Java program from the Sapelo Program Microbial Observatory for automatic classification of bacterial 16S rRNA sequences based on Ribosomal Database Project taxonomy and Smith-Waterman alignment. (.). K.*Fanger U.*Alvarez P.J.*Siegrist H.*van der Meer J.R.*Zehnder A.J. (
    • Dyszynski G Sheldon WM (2006) RDPquery: A Java program from the Sapelo Program Microbial Observatory for automatic classification of bacterial 16S rRNA sequences based on Ribosomal Database Project taxonomy and Smith-Waterman alignment. (). K, Fanger U, Alvarez PJ, Siegrist H, van der Meer JR Zehnder AJ (2001) Enrichment and characterization of an anammox bacterium from a rotating biological contactor treating ammonium-rich leachate. Arch Microbiol 175 : 198 207.
    • (2001) Arch Microbiol , vol.175 , pp. 198-207
    • Dyszynski, G.1    Sheldon, W.M.2
  • 10
    • 26844541457 scopus 로고    scopus 로고
    • Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
    • Francis CA, Roberts KJ, Beman JM, Santoro AE Oakley BB (2005) Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc Natl Acad Sci USA 102 : 14683 14688.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 14683-14688
    • Francis, C.A.1    Roberts, K.J.2    Beman, J.M.3    Santoro, A.E.4    Oakley, B.B.5
  • 11
    • 33644841315 scopus 로고    scopus 로고
    • Changes in the community structure and activity of betaproteobacterial ammonia-oxidizing sediment bacteria along a freshwater-marine gradient
    • Freitag TE, Chang L Prosser JI (2006) Changes in the community structure and activity of betaproteobacterial ammonia-oxidizing sediment bacteria along a freshwater-marine gradient. Environ Microbiol 8 : 684 696.
    • (2006) Environ Microbiol , vol.8 , pp. 684-696
    • Freitag, T.E.1    Chang, L.2    Prosser, J.I.3
  • 12
    • 34247562889 scopus 로고    scopus 로고
    • Real-time PCR assay for the simultaneous quantification of nitrifying and denitrifying bacteria in activated sludge
    • Geets J, de Cooman M, Wittebolle L et al 2007) Real-time PCR assay for the simultaneous quantification of nitrifying and denitrifying bacteria in activated sludge. Appl Microbiol Biotechnol 75 : 211 221.
    • (2007) Appl Microbiol Biotechnol , vol.75 , pp. 211-221
    • Geets, J.1    De Cooman, M.2    Wittebolle, L.3    Al, E.4
  • 13
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good IJ (1953) The population frequencies of species and the estimation of population parameters. Biometrika 40 : 237 264.
    • (1953) Biometrika , vol.40 , pp. 237-264
    • Good, I.J.1
  • 14
    • 32044449405 scopus 로고    scopus 로고
    • Culture-independent techniques for rapid detection of bacteria associated with loss of chloramine residual in a drinking water system
    • Hoefel D, Monis PT, Grooby WL, Andrews S Saint CP (2005) Culture-independent techniques for rapid detection of bacteria associated with loss of chloramine residual in a drinking water system. Appl Environ Microbiol 71 : 6479 6488.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 6479-6488
    • Hoefel, D.1    Monis, P.T.2    Grooby, W.L.3    Andrews, S.4    Saint, C.P.5
  • 15
  • 17
    • 0032878687 scopus 로고    scopus 로고
    • Comparison of Nitrosospira strains isolated from terrestrial environments
    • Jiang QQ Bakken LR (1999a) Comparison of Nitrosospira strains isolated from terrestrial environments. FEMS Microbiol Ecol 30 : 171 186.
    • (1999) FEMS Microbiol Ecol , vol.30 , pp. 171-186
    • Jiang, Q.Q.1    Bakken, L.R.2
  • 18
    • 0033014445 scopus 로고    scopus 로고
    • Nitrous oxide production and methane oxidation by different ammonia-oxidizing bacteria
    • Jiang QQ Bakken LR (1999b) Nitrous oxide production and methane oxidation by different ammonia-oxidizing bacteria. Appl Environ Microbiol 65 : 2679 2684.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 2679-2684
    • Jiang, Q.Q.1    Bakken, L.R.2
  • 20
    • 1442350507 scopus 로고    scopus 로고
    • Chemical inhibition of nitrification in activated sludge
    • Kelly RT, Henriques ID Love NG (2004) Chemical inhibition of nitrification in activated sludge. Biotechnol Bioeng 85 : 683 694.
    • (2004) Biotechnol Bioeng , vol.85 , pp. 683-694
    • Kelly, R.T.1    Henriques, I.D.2    Love, N.G.3
  • 21
    • 0030901922 scopus 로고    scopus 로고
    • Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments
    • Kowalchuk GA, Stephen JR, De Boer W, Prosser JI, Embley TM Woldendorp JW (1997) Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments. Appl Environ Microbiol 63 : 1489 1497.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 1489-1497
    • Kowalchuk, G.A.1    Stephen, J.R.2    De Boer, W.3    Prosser, J.I.4    Embley, T.M.5    Woldendorp, J.W.6
  • 22
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB Nei M (2001) MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17 : 1244 1245.
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 23
    • 33747479446 scopus 로고    scopus 로고
    • Archaea predominate among ammonia-oxidizing prokaryotes in soils
    • Leininger S, Urich T, Schloter M et al 2006) Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442 : 806 809.
    • (2006) Nature , vol.442 , pp. 806-809
    • Leininger, S.1    Urich, T.2    Schloter, M.3    Al, E.4
  • 24
    • 33646722121 scopus 로고    scopus 로고
    • Feasibility of controlling nitrification in predenitrification plants using DO, pH and ORP sensors
    • Ma Y, Peng Y, Yuan Z, Wang S Wu X (2006) Feasibility of controlling nitrification in predenitrification plants using DO, pH and ORP sensors. Water Sci Technol 53 : 235 243.
    • (2006) Water Sci Technol , vol.53 , pp. 235-243
    • Ma, Y.1    Peng, Y.2    Yuan, Z.3    Wang, S.4    Wu, X.5
  • 25
    • 0018891624 scopus 로고
    • A selective and diagnostic medium for ammonia oxidizing bacteria
    • Macdonald RM Spokes JR (1980) A selective and diagnostic medium for ammonia oxidizing bacteria. FEMS Microbiol Lett 8 : 143 145.
    • (1980) FEMS Microbiol Lett , vol.8 , pp. 143-145
    • MacDonald, R.M.1    Spokes, J.R.2
  • 26
    • 36348984528 scopus 로고    scopus 로고
    • Robotized incubation system for monitoring gases (O(2), NO, N(2)O N(2)) in denitrifying cultures
    • Molstad L, Dorsch P Bakken LR (2007) Robotized incubation system for monitoring gases (O(2), NO, N(2)O N(2)) in denitrifying cultures. J Microbiol Methods 71 : 202 211.
    • (2007) J Microbiol Methods , vol.71 , pp. 202-211
    • Molstad, L.1    Dorsch, P.2    Bakken, L.R.3
  • 27
    • 34248562051 scopus 로고    scopus 로고
    • 2O product ratio of nitrification and its dependence on long-term changes in soil pH
    • 2O product ratio of nitrification and its dependence on long-term changes in soil pH. Soil Biol Biochem 39 : 2048 2057.
    • (2007) Soil Biol Biochem , vol.39 , pp. 2048-2057
    • Morkved, P.T.1    Dorsch, P.2    Bakken, L.R.3
  • 28
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, de Waal EC Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59 : 695 700.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 29
    • 0032424081 scopus 로고    scopus 로고
    • Monitoring a widespread bacterial group: In situ detection of planctomycetes with 16S rRNA-targeted probes
    • Neef A, Amann R, Schlesner H Schleifer KH (1998) Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes. Microbiology 144 : 3257 3266.
    • (1998) Microbiology , vol.144 , pp. 3257-3266
    • Neef, A.1    Amann, R.2    Schlesner, H.3    Schleifer, K.H.4
  • 30
    • 0036242855 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria
    • Nicolaisen MH Ramsing NB (2002) Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria. J Microbiol Methods 50 : 189 203.
    • (2002) J Microbiol Methods , vol.50 , pp. 189-203
    • Nicolaisen, M.H.1    Ramsing, N.B.2
  • 31
    • 0029982865 scopus 로고    scopus 로고
    • Nitrous oxide production by Alcaligenes faecalis under transient and dynamic aerobic and anaerobic conditions
    • Otte S, Grobben NG, Robertson LA, Jetten MSM Kuenen JG (1996) Nitrous oxide production by Alcaligenes faecalis under transient and dynamic aerobic and anaerobic conditions. Appl Environ Microbiol 62 : 2421 2426.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 2421-2426
    • Otte, S.1    Grobben, N.G.2    Robertson, L.A.3    Jetten, M.S.M.4    Kuenen, J.G.5
  • 32
    • 33747341311 scopus 로고    scopus 로고
    • Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors
    • Park HD, Wells GF, Bae H, Criddle CS Francis CA (2006) Occurrence of ammonia-oxidizing archaea in wastewater treatment plant bioreactors. Appl Environ Microbiol 72 : 5643 5647.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 5643-5647
    • Park, H.D.1    Wells, G.F.2    Bae, H.3    Criddle, C.S.4    Francis, C.A.5
  • 33
    • 0025316041 scopus 로고
    • Production of nitricoxide in Nitrosomonas europaea by reduction of nitrite
    • Remde A Conrad R (1990) Production of nitricoxide in Nitrosomonas europaea by reduction of nitrite. Arch Microbiol 154 : 187 191.
    • (1990) Arch Microbiol , vol.154 , pp. 187-191
    • Remde, A.1    Conrad, R.2
  • 34
    • 0030814870 scopus 로고    scopus 로고
    • The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
    • Rotthauwe JH, Witzel KP Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63 : 4704 4712.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4704-4712
    • Rotthauwe, J.H.1    Witzel, K.P.2    Liesack, W.3
  • 35
    • 0008486536 scopus 로고    scopus 로고
    • Mass balance in a compact nitrogen and phosphorus WWTP
    • Hahn, H.H., Hoffmann, E. Ødegaard, H., eds), pp. Springer-Verlag, Berlin.
    • Sagberg P, Ryrfors P Grundnes Berg K (1998) Mass balance in a compact nitrogen and phosphorus WWTP. Chemical Water and Waste Water Treatment (Hahn HH, Hoffmann E Ødegaard H, eds), pp. 231 242. Springer-Verlag, Berlin.
    • (1998) Chemical Water and Waste Water Treatment , pp. 231-242
    • Sagberg, P.1    Ryrfors, P.2    Grundnes Berg, K.3
  • 36
    • 0041803255 scopus 로고    scopus 로고
    • Effect of oxygen concentration on nitrification and denitrification in single activated sludge flocs
    • Satoh H, Nakamura Y, Ono H Okabe S (2003) Effect of oxygen concentration on nitrification and denitrification in single activated sludge flocs. Biotechnol Bioeng 83 : 604 607.
    • (2003) Biotechnol Bioeng , vol.83 , pp. 604-607
    • Satoh, H.1    Nakamura, Y.2    Ono, H.3    Okabe, S.4
  • 37
    • 1542298193 scopus 로고    scopus 로고
    • Macroscale and microscale analyses of nitrification and denitrification in biofilms attached on membrane aerated biofilm reactors
    • Satoh H, Ono H, Rulin B, Kamo J, Okabe S Fukushi K (2004) Macroscale and microscale analyses of nitrification and denitrification in biofilms attached on membrane aerated biofilm reactors. Water Res 38 : 1633 1641.
    • (2004) Water Res , vol.38 , pp. 1633-1641
    • Satoh, H.1    Ono, H.2    Rulin, B.3    Kamo, J.4    Okabe, S.5    Fukushi, K.6
  • 38
    • 0034096495 scopus 로고    scopus 로고
    • Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation
    • Schmid M, Twachtmann U, Klein M et al 2000) Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation. Syst Appl Microbiol 23 : 93 106.
    • (2000) Syst Appl Microbiol , vol.23 , pp. 93-106
    • Schmid, M.1    Twachtmann, U.2    Klein, M.3    Al, E.4
  • 39
    • 20244376481 scopus 로고    scopus 로고
    • Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria
    • Schmid MC, Maas B, Dapena A et al 2005) Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria. Appl Environ Microbiol 71 : 1677 1684.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1677-1684
    • Schmid, M.C.1    Maas, B.2    Dapena, A.3    Al, E.4
  • 40
    • 0033614964 scopus 로고    scopus 로고
    • Missing lithotroph identified as new planctomycete
    • Strous M, Fuerst JA, Kramer EHM et al 1999) Missing lithotroph identified as new planctomycete. Nature 400 : 446 449.
    • (1999) Nature , vol.400 , pp. 446-449
    • Strous, M.1    Fuerst, J.A.2    Kramer, E.H.M.3    Al, E.4
  • 41
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25 : 4876 4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.