Nitrous oxide production and methane oxidation by different ammonia- oxidizing bacteria

Applied and Environmental Microbiology

Volumn 65, Issue 6, 1999, Pages 2679-2684

  Jiang, Qing Qiao ^a   Bakken, Lars R ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

AMMONIUM DERIVATIVE; METHANE; NITROUS OXIDE;

BACTERIUM; COMPARATIVE STUDY; METHANE; NITROUS OXIDE; OXIDATION;

ARTICLE; BACTERIUM IDENTIFICATION; CALCULATION; CHEMICAL ANALYSIS; COMPARATIVE STUDY; NITROBACTER; NITROSOMONAS; NITROSOSPIRA EUROPA; NITROSOSPIRA MULTIFORMIS; NONHUMAN; OXIDATION; PH; STRAIN DIFFERENCE;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; NITROBACTER; NITROSOMONADALES; NITROSOMONAS EUROPAEA; NITROSOSPIRA; NITROSOSPIRA MULTIFORMIS;

EID: 0033014445     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.65.6.2679-2684.1999     Document Type: Article

References (38)

1. Adamsen, A. P. S., and G. M. King. 1993. Methane oxidation in temperate and subarctic forest soils: rates, vertical zonation, and responses to water and nitrogen. Appl. Environ. Microbiol. 59:485-490.
2. - treated soils under aerobic and anaerobic conditions. Soil Biol. Biochem. 16:351-356.
3. 4, and CO oxidation by methanotrophs and nitrifiers. Microbiol. Rev. 53:68-84.
4. Belser, L. W. 1984. Bicarbonate uptake by nitrifiers: effects of growth rate, pH, substrate concentration, and metabolic inhibitors. Appl. Environ. Microbiol. 48:1100-1104.
5. Blackmer, A. M., J. M. Bremner, and E. L. Schmidt. 1980. Production of nitrous oxide by ammonia-oxidizing chemoautotrophic microorganisms in soil. Appl. Environ. Microbiol. 40:1060-1066.
6. Bouwman, A. F. 1990. Exchange of greenhouse gases between terrestrial ecosystems and the atmosphere, p. 61-127. In A. F. Bouwman (ed.), Soils and the greenhouse effect. Wiley and Sons, Chichester, United Kingdom.
7. Bremner, J. M., and A. M. Blackmer. 1979. Effect of acetylene and soil water content on emission of nitrous oxide from soils. Nature 280:380-381.
8. Bremner, J. M., and A. M. Blackmer. 1981. Terrestrial nitrification as a source of atmospheric nitrous oxide, p. 151-170. In C. C. Delwiche (ed.), Denitrification, nitrification and atmospheric nitrous oxide. John Wiley & Sons Inc., New York, N. Y.
9. Dispirito, A. A., L. R. Taaffe, J. D. Lipscomb, and A. B. Hooper. 1985. A 'blue' copper oxidase from Nitrosomonas europaea. Biochim. Biophys. Acta 827:320-326.
10. Duxbury, J. M., D. R. Bouldin, R. E. Terry, and R. L. Tate III. 1982. Emissions of nitrous oxide from soils. Nature 298:462-464.
11. Goodroad, L. L., and D. R. Keeney. 1984. Nitrous oxide production in aerobic soils under varying pH, temperature, and water content. Soil Biol. Biochem. 16:39-44.
12. 2O by nitrifying bacteria at reduced concentrations of oxygen. Appl. Environ. Microbiol. 40:526-532.
13. Hanson, R. S., and T. E. Hanson. 1996. Mathanotrophic bacteria. Microbiol. Rev. 60:439-471.
14. Hiorns, W. D., R. C. Hastings, I. M. Head, A. J. McCarthy, J. R. Saunders, R. W. Pickup, and G. H. Hall. 1995. Amplification of 16S ribosomal RNA genes of autotrophic ammonia-oxidizing bacteria demonstrates the ubiquity of Nitrosospira in the environment. Microbiology 141:2793-2800.
15. Hutsch, B., C. P. Webster, and D. Powlson. 1993. Long term effects of nitrogen fertilization on methane oxidation in soil of the Broadbalk experiment. Soil Biol. Biochem. 25:1307-1315.
16. Hyman, M. R., and P. M. Wood. 1983. Methane oxidation by Nitrosomonas europaea. Biochem. J. 212:31-37.
17. Hynes, R. K., and R. Knowles. 1984. Production of nitrous oxide by Nitrosomonas europaea: effects of acetylene, pH, and oxygen. Can. J. Microbiol. 30:1397-1404.
18. Jiang, Q. Q., and L. R. Bakken. Comparison of Nitrosospira strains isolated from terrestrial environments. FEMS Microbiol. Ecol., in press.
19. Jones, R. D., and R. Y. Morita. 1983. Methane oxidation by Nitrosococcus oceanus and Nitrosomonas europaea. Appl. Environ. Microbiol. 45:401-410.
20. Klemedtsson, L., Q. Jiang, Å. K. Klemedtsson, and L. R. Bakken. Autotrophic ammonium oxidizing bacteria in Swedish mor humus. Soil Biol. Biochem., in press.
21. Martikainen, P. J. 1985. Nitrous oxide emission associated with autotrophic ammonium oxidation in acid coniferous forest soil. Appl. Environ. Microbiol. 50:1519-1525.
22. Miller, D. J., and D. J. D. Nicolas. 1985. Characterization of a soluble cytochrome oxidase/nitrite reductase of Nitrosomonas europaea. 3. Gen. Microbiol. 131:2851-2854.
23. 2O production by Nitrosomonas europaea: an examination of nitrifier denitrification. Appl. Environ. Microbiol. 49:1134-1141.
24. Remde, A., and R. Conrad. 1990. Production of nitric oxide in Nitrosomonas europaea by reduction of nitrite. Arch. Microbiol. 154:187-191.
25. Ritchie, G. A. F., and D. J. D. Nicolas. 1972. Identification of the sources of nitrous oxide produced by oxidative and reductive processes in Nitrosomonas europaea. Biochem. J. 126:1181-1191.
26. Ritchie, G. A. F., and D. J. D. Nicolas. 1974. The partial characterization of purified nitrite reductase and hydroxylamine oxidase from Nitrosomonas europaea. Biochem. J. 138:471-480.
27. Robertson, G. P., and J. M. Tiedje. 1987. Nitrous oxide sources in aerobic soils. Nitrification, denitrification and other biological processes. Soil Biol. Biochem. 19:187-193.
28. Seitzinger, S. P., M. E. O. Pilson, and S. W. Watson. 1983. Nitrous oxide production in nearshore marine sediments. Science 222:1244-1245.
29. Sitaula, B. K., and L. R. Bakken. 1993. Nitrous oxide release from spruce forest soil: relationships with nitrification, methane uptake, temperature, moisture and fertilization. Soil Biol. Biochem. 25:1415-1421.
30. Sitaula, B. K., J. Luo, and L. R. Bakken. 1992. Rapid analysis of climate gases by wide bore capillary gas chromatography. J. Erviron. Qual. 21:493-496.
31. Stark, J. M., and M. K. Firestone. 1996. Kinetic characteristics of ammonium oxidizer communities in a California oak woodland-annual grassland. Soil Biol. Biochem. 28:1307-1317.
32. Stephen, J. R., A. E. McCaig, Z. Smith, J. I. Prosser, and T. M. Embley. 1996. Molecular diversity of soil and marine 16S rRNA gene sequences related to β-subgroup ammonia-oxidizing bacteria. Appl. Environ. Microbiol. 62:4147-4154.
33. Utåker, J. B., L. R. Bakken, Q. Q. Jiang, and I. F. Nes. 1995. Phylogenetic analysis of seven new isolates of ammonia-oxidizing bacteria based on 16S rRNA gene sequences. Syst. Appl. Microbiol. 18:549-559.
34. Utåker, J. B., and I. F. Nes. 1998. A qualitative evaluation of the published oligonucleotides specific for the 16S rRNA gene sequences of the ammoniaoxidizing bacteria. Syst. Appl. Microbiol. 21:72-88.
35. Verstraete, W. 1981. Nitrification. Ecol. Bull. 33:303-314.
36. Wilhelm, E., R. Battino, and R. J. Wilcock. 1977. Low pressure solubility of gases in liquid water. Chem. Rev. 77:219-262.
37. 4 oxidation in soils fertilized with organic and inorganic N, differential effects. Soil Biol. Biochem. 28:1135-1136.
38. Wood, P. M. 1986. Nitrification as a bacterial energy source, p. 39-62. In J. I. Prosser (ed.), Nitrification. IRL Press, Oxford, United Kingdom.