메뉴 건너뛰기




Volumn 105, Issue 35, 2008, Pages 12825-12830

The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria

Author keywords

Kinase; NMR; Phosphatase; Phosphorylation; X ray

Indexed keywords

ADENOSINE TRIPHOSPHATE; BACTERIAL PROTEIN; PROTEIN KAIA; PROTEIN KAIB; PROTEIN KAIC; UNCLASSIFIED DRUG;

EID: 51349134181     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0800526105     Document Type: Article
Times cited : (120)

References (42)
  • 2
    • 21344470923 scopus 로고    scopus 로고
    • Circadian rhythms from multiple oscillators: Lessons from diverse organisms
    • Bell-Pedersen D, et al. (2005) Circadian rhythms from multiple oscillators: Lessons from diverse organisms. Nat Rev Genet 6:544-556.
    • (2005) Nat Rev Genet , vol.6 , pp. 544-556
    • Bell-Pedersen, D.1
  • 3
    • 0027190489 scopus 로고
    • Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria
    • Kondo T, et al. (1993) Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci USA 90:5672-5676.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 5672-5676
    • Kondo, T.1
  • 5
    • 4344699146 scopus 로고    scopus 로고
    • The adaptive value of circadian clocks: An experimental assessment in cyanobacteria
    • Woelfle MA, Ouyang Y, Phanvijhitsiri K, Johnson CH (2004) The adaptive value of circadian clocks: An experimental assessment in cyanobacteria. Curr Biol 14:1481-1486.
    • (2004) Curr Biol , vol.14 , pp. 1481-1486
    • Woelfle, M.A.1    Ouyang, Y.2    Phanvijhitsiri, K.3    Johnson, C.H.4
  • 7
    • 0029042379 scopus 로고
    • Circadian orchestration of gene expression in cyanobacteria
    • Liu Y, et al. (1995) Circadian orchestration of gene expression in cyanobacteria. Genes Dev 9:1469-1478.
    • (1995) Genes Dev , vol.9 , pp. 1469-1478
    • Liu, Y.1
  • 8
    • 1642555774 scopus 로고    scopus 로고
    • Global gene repression by KaiC as a master process of prokaryotic circadian system
    • Nakahira Y, et al. (2004) Global gene repression by KaiC as a master process of prokaryotic circadian system. Proc Natl Acad Sci USA 101:881-885.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 881-885
    • Nakahira, Y.1
  • 9
    • 0032483510 scopus 로고    scopus 로고
    • Expression of a gene cluster. kaiABC as a circadian feedback process in cyanobacteria
    • Ishiura M, et al. (1998) Expression of a gene cluster. kaiABC as a circadian feedback process in cyanobacteria. Science 281:1519-1523.
    • (1998) Science , vol.281 , pp. 1519-1523
    • Ishiura, M.1
  • 10
    • 0037180437 scopus 로고    scopus 로고
    • Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: A potential clock input mechanism
    • Williams SB, Vakonakis I, Golden SS, LiWang AC (2002) Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: A potential clock input mechanism. Proc Natl Acad Sci USA 99:15357-15362.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 15357-15362
    • Williams, S.B.1    Vakonakis, I.2    Golden, S.S.3    LiWang, A.C.4
  • 11
    • 1242274653 scopus 로고    scopus 로고
    • NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for the KaiA-KaiC interaction
    • Vakonakis I, et al. (2004) NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for the KaiA-KaiC interaction. Proc Natl Acad Sci USA 101:1479-1484.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1479-1484
    • Vakonakis, I.1
  • 12
    • 2442421006 scopus 로고    scopus 로고
    • Crystal structure of circadian clock protein KaiA from Synechococcus elongatus
    • Ye S, Vakonakis I, Ioerger TR, LiWang AC, Sacchettini JC (2004) Crystal structure of circadian clock protein KaiA from Synechococcus elongatus. J Biol Chem 279:20511-20518.
    • (2004) J Biol Chem , vol.279 , pp. 20511-20518
    • Ye, S.1    Vakonakis, I.2    Ioerger, T.R.3    LiWang, A.C.4    Sacchettini, J.C.5
  • 13
    • 2442569769 scopus 로고    scopus 로고
    • Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC
    • Garces RG, Wu N, Gillon W, Pai EF (2004) Anabaena circadian clock proteins KaiA and KaiB reveal a potential common binding site to their partner KaiC. EMBO J 23:1688-1698.
    • (2004) EMBO J , vol.23 , pp. 1688-1698
    • Garces, R.G.1    Wu, N.2    Gillon, W.3    Pai, E.F.4
  • 14
    • 21444458211 scopus 로고    scopus 로고
    • Tetrameric architecture of the circadian clock protein KaiB: A novel interface for intermolecular interactions and its impact on the circadian rhythm
    • Hitomi K, Oyama T, Han S, Arvai AS, Getzoff ED (2005) Tetrameric architecture of the circadian clock protein KaiB: A novel interface for intermolecular interactions and its impact on the circadian rhythm. J Biol Chem 280:19127-19135.
    • (2005) J Biol Chem , vol.280 , pp. 19127-19135
    • Hitomi, K.1    Oyama, T.2    Han, S.3    Arvai, A.S.4    Getzoff, E.D.5
  • 15
    • 4143103631 scopus 로고    scopus 로고
    • Visualizing a circadian clock protein: Crystal structure of KaiC and functional insights
    • Pattanayek R, et al. (2004) Visualizing a circadian clock protein: Crystal structure of KaiC and functional insights. Mol Cell 15:375-388.
    • (2004) Mol Cell , vol.15 , pp. 375-388
    • Pattanayek, R.1
  • 16
    • 17244373578 scopus 로고    scopus 로고
    • Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro
    • Nakajima M, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308:414-415.
    • (2005) Science , vol.308 , pp. 414-415
    • Nakajima, M.1
  • 17
    • 0038219594 scopus 로고    scopus 로고
    • Cyanobacterial circadian clockwork: Roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC
    • Xu Y, Mori T, Johnson CH (2003) Cyanobacterial circadian clockwork: Roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC. EMBO J 22:2117-2126.
    • (2003) EMBO J , vol.22 , pp. 2117-2126
    • Xu, Y.1    Mori, T.2    Johnson, C.H.3
  • 18
    • 0037881861 scopus 로고    scopus 로고
    • KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system
    • Kitayama Y, Iwasaki H, Nishiwaki T, Kondo T (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. EMBO J 22:2127-2134.
    • (2003) EMBO J , vol.22 , pp. 2127-2134
    • Kitayama, Y.1    Iwasaki, H.2    Nishiwaki, T.3    Kondo, T.4
  • 20
    • 12244296161 scopus 로고    scopus 로고
    • No transcription- translation feedback in circadian rhythm of KaiC phosphorylation
    • Tomita J, Nakajima M, Kondo T, Iwasaki H (2005) No transcription- translation feedback in circadian rhythm of KaiC phosphorylation. Science 307:251-254.
    • (2005) Science , vol.307 , pp. 251-254
    • Tomita, J.1    Nakajima, M.2    Kondo, T.3    Iwasaki, H.4
  • 21
    • 4644325554 scopus 로고    scopus 로고
    • Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
    • Xu Y, et al. (2004) Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses. Proc Natl Acad Sci USA 101:13933-13938.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 13933-13938
    • Xu, Y.1
  • 22
    • 4644310259 scopus 로고    scopus 로고
    • Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942
    • Nishiwaki T, et al. (2004) Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942. Proc Natl Acad Sci USA 101:13927-13932.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 13927-13932
    • Nishiwaki, T.1
  • 23
    • 34548382214 scopus 로고    scopus 로고
    • A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria
    • Nishiwaki T, et al. (2007) A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria. EMBO J 26:4029-4037.
    • (2007) EMBO J , vol.26 , pp. 4029-4037
    • Nishiwaki, T.1
  • 24
    • 37549018348 scopus 로고    scopus 로고
    • Ordered phosphorylation governs oscillation of a three-protein circadian clock
    • Rust MJ, Markson JS, Lane WS, Fisher DS, O'Shea EK (2007) Ordered phosphorylation governs oscillation of a three-protein circadian clock. Science 318:809-812.
    • (2007) Science , vol.318 , pp. 809-812
    • Rust, M.J.1    Markson, J.S.2    Lane, W.S.3    Fisher, D.S.4    O'Shea, E.K.5
  • 25
    • 34247232450 scopus 로고    scopus 로고
    • Elucidating the ticking of an in vitro circadian clockwork
    • Mori T, et al. (2007) Elucidating the ticking of an in vitro circadian clockwork. PLoS Biol 5:841-853.
    • (2007) PLoS Biol , vol.5 , pp. 841-853
    • Mori, T.1
  • 26
    • 32644489285 scopus 로고    scopus 로고
    • Hourglass model for a protein-based circadian oscillator
    • Emberly E, Wingreen NS (2006) Hourglass model for a protein-based circadian oscillator. Phys Rev Lett 96:038301-038304.
    • (2006) Phys Rev Lett , vol.96 , pp. 038301-038304
    • Emberly, E.1    Wingreen, N.S.2
  • 27
    • 35848958822 scopus 로고    scopus 로고
    • Autonomous synchronization of the circadian KaiC phosphorylation rhythm
    • Ito H, et al. (2007) Autonomous synchronization of the circadian KaiC phosphorylation rhythm. Nat Struct Mol Biol 14:1084-1088.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 1084-1088
    • Ito, H.1
  • 28
    • 44849136755 scopus 로고    scopus 로고
    • Dual KaiC-based oscillations constitute the circadian system of cyanobacteria
    • Kitayama Y, Nishiwaki T, Terauchi K, Kondo T (2008) Dual KaiC-based oscillations constitute the circadian system of cyanobacteria. Genes Dev 22:1513-1521.
    • (2008) Genes Dev , vol.22 , pp. 1513-1521
    • Kitayama, Y.1    Nishiwaki, T.2    Terauchi, K.3    Kondo, T.4
  • 29
    • 3342889359 scopus 로고    scopus 로고
    • Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: Implications for KaiC regulation
    • Vakonakis I, LiWang AC (2004) Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: Implications for KaiC regulation. Proc Natl Acad Sci USA 101:10925-10930.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 10925-10930
    • Vakonakis, I.1    LiWang, A.C.2
  • 30
    • 33646593201 scopus 로고    scopus 로고
    • Analysis of KaiA-KaiC protein interactions in the cyanobacterial circadian clock using hybrid structural methods
    • Pattanayek R, et al. (2006) Analysis of KaiA-KaiC protein interactions in the cyanobacterial circadian clock using hybrid structural methods. EMBO J 25:2017-2028.
    • (2006) EMBO J , vol.25 , pp. 2017-2028
    • Pattanayek, R.1
  • 31
    • 40849145295 scopus 로고    scopus 로고
    • Assembly and disassembly dynamics of the cyanobacterial periodosome
    • Akiyama S, Nohara A, Ito K, Maeda Y (2008) Assembly and disassembly dynamics of the cyanobacterial periodosome. Mol Cell 29:1-14.
    • (2008) Mol Cell , vol.29 , pp. 1-14
    • Akiyama, S.1    Nohara, A.2    Ito, K.3    Maeda, Y.4
  • 32
    • 1542345751 scopus 로고    scopus 로고
    • Stoichiometric interactions between cyanobacterial clock proteins KaiA and KaiC
    • Hayashi F, et al. (2004) Stoichiometric interactions between cyanobacterial clock proteins KaiA and KaiC. Biochem Biophys Res Commun 316:195-202.
    • (2004) Biochem Biophys Res Commun , vol.316 , pp. 195-202
    • Hayashi, F.1
  • 33
    • 33746147001 scopus 로고    scopus 로고
    • Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro
    • Kageyama H, et al. (2006) Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. Mol Cell 23:161-171.
    • (2006) Mol Cell , vol.23 , pp. 161-171
    • Kageyama, H.1
  • 34
    • 3042637775 scopus 로고    scopus 로고
    • Crystal structure of the C-terminal clock-oscillator domain of the cyanobacterial KaiA protein
    • Uzumaki T, et al. (2004) Crystal structure of the C-terminal clock-oscillator domain of the cyanobacterial KaiA protein. Nat Struct Mol Biol 11:623-631.
    • (2004) Nat Struct Mol Biol , vol.11 , pp. 623-631
    • Uzumaki, T.1
  • 35
    • 0019330817 scopus 로고
    • Magnetic resonance measurements of intersubstrate distances at the active site of protein kinase using substitution-inert cobalt(III) and chromium(III) complexes of adenosine 5′-(β,γ-methylenetriphosphate)
    • Granot J, Mildvan AS, Bramson HN, Kaiser ET (1980) Magnetic resonance measurements of intersubstrate distances at the active site of protein kinase using substitution-inert cobalt(III) and chromium(III) complexes of adenosine 5′-(β,γ-methylenetriphosphate). Biochemistry 19:3537-3543.
    • (1980) Biochemistry , vol.19 , pp. 3537-3543
    • Granot, J.1    Mildvan, A.S.2    Bramson, H.N.3    Kaiser, E.T.4
  • 36
    • 0030724727 scopus 로고    scopus 로고
    • Mechanisms of signaling and related enzymes
    • Mildvan AS (1997) Mechanisms of signaling and related enzymes. Proteins Struct Funct Genet 29:401-416.
    • (1997) Proteins Struct Funct Genet , vol.29 , pp. 401-416
    • Mildvan, A.S.1
  • 37
    • 0029902679 scopus 로고    scopus 로고
    • Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase
    • Kuzmic P (1996) Program DYNAFIT for the analysis of enzyme kinetic data: Application to HIV proteinase. Anal Biochem 237:260-273.
    • (1996) Anal Biochem , vol.237 , pp. 260-273
    • Kuzmic, P.1
  • 38
    • 34248575624 scopus 로고    scopus 로고
    • Specialized techniques for site-directed mutagenesis in cyanobacteria
    • ed Rosato E Humana Press, Totowa
    • Clerico EM, Ditty JL, Golden SS (2007) Specialized techniques for site-directed mutagenesis in cyanobacteria. In Methods in Molecular Biology, ed Rosato E (Humana Press, Totowa), 362:155-172.
    • (2007) Methods in Molecular Biology , vol.362 , pp. 155-172
    • Clerico, E.M.1    Ditty, J.L.2    Golden, S.S.3
  • 39
    • 34248592701 scopus 로고    scopus 로고
    • Detection of rhythmic bioluminescence from luciferase reporters in cyanobacteria
    • ed Rosato E Humana Press, Totowa
    • Mackey SR, Ditty JL, Clerico EM, Golden SS (2007) Detection of rhythmic bioluminescence from luciferase reporters in cyanobacteria. In Methods in Molecular Biology, ed Rosato E (Humana Press, Totowa), 362:115-130.
    • (2007) Methods in Molecular Biology , vol.362 , pp. 115-130
    • Mackey, S.R.1    Ditty, J.L.2    Clerico, E.M.3    Golden, S.S.4
  • 40
    • 4444221565 scopus 로고    scopus 로고
    • UCSF Chimera - A visualization system for exploratory research and analysis
    • Pettersen EF, et al. (2004) UCSF Chimera - A visualization system for exploratory research and analysis. J Comput Chem 25:1605-1612.
    • (2004) J Comput Chem , vol.25 , pp. 1605-1612
    • Pettersen, E.F.1
  • 41
    • 34248594137 scopus 로고    scopus 로고
    • Protein extraction, fractionation, and purification from cyanobacteria
    • ed Rosato E Humana Press, Totowa
    • Ivleva NB, Golden SS (2007) Protein extraction, fractionation, and purification from cyanobacteria. In Methods in Molecular Biology, ed Rosato E (Humana Press, Totowa), 362:365-373.
    • (2007) Methods in Molecular Biology , vol.362 , pp. 365-373
    • Ivleva, N.B.1    Golden, S.S.2
  • 42
    • 23844486680 scopus 로고    scopus 로고
    • Stability of the Synechococcus elongatus PCC 7942 circadian clock under directed anti-phase expression of the kai genes
    • Ditty JL, Canales SR, Anderson BE, Williams SB, Golden SS (2005) Stability of the Synechococcus elongatus PCC 7942 circadian clock under directed anti-phase expression of the kai genes. Microbiology 151:2605-2613.
    • (2005) Microbiology , vol.151 , pp. 2605-2613
    • Ditty, J.L.1    Canales, S.R.2    Anderson, B.E.3    Williams, S.B.4    Golden, S.S.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.