Evolutionary origins of a novel host plant detoxification gene in butterflies

Molecular Biology and Evolution

Volumn 25, Issue 5, 2008, Pages 809-820

  Fischer, Hanna M ^a   Wheat, Christopher W ^b   Heckel, David G ^a   Vogel, Heiko ^a  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ECOLOGY   (Germany)

^b PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

Brassicaceae; Detoxification; Host plant shift; Molecular evolution; Pieridae; Tandem duplication

Indexed keywords

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; BRASSICACEAE; BUTTERFLY; CONTROLLED STUDY; DATA BASE; EVOLUTIONARY RATE; EXON; EXPRESSED SEQUENCE TAG; FUNCTIONAL GENOMICS; GENE; GENE DUPLICATION; GENE EXPRESSION; GENE FUNCTION; GENE LIBRARY; INTRON; LEPIDOPTERA; MAJOR ALLERGEN GENE; MOLECULAR EVOLUTION; MULTIGENE FAMILY; NONHUMAN; NSP GENE; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT INSECT INTERACTION; SDMA GENE; SEQUENCE HOMOLOGY; TANDEM REPEAT; ANIMAL; ENZYMOLOGY; GENETIC DATABASE; GENETICS; HOST PARASITE INTERACTION; PARASITOLOGY; PHYSIOLOGY; PROTEIN TERTIARY STRUCTURE;

BRASSICACEAE; HEXAPODA; INSECTA; LEPIDOPTERA; PAPILIONOIDEA; PIERIDAE;

INSECT PROTEIN;

ANIMALS; BRASSICACEAE; BUTTERFLIES; DATABASES, GENETIC; EVOLUTION, MOLECULAR; EXONS; EXPRESSED SEQUENCE TAGS; GENE LIBRARY; GENES, INSECT; HOST-PARASITE INTERACTIONS; INSECT PROTEINS; INTRONS; MULTIGENE FAMILY; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY;

EID: 50949085678     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msn014     Document Type: Article

References (44)

1. Benderoth M, Textor S, Windsor AJ, Mitchell-Olds T, Gershenzon J, Kroymann J. 2006. Positive selection driving diversification in plant secondary metabolism. Proc Natl Acad Sci USA. 103:9118-9123.
2. Bjorklund AK, Ekman D, Elofsson A. 2006. Expansion of protein domain repeats. PLoS Comput Biol. 2:959-970.
3. Braby MF, Vila R, Pierce NE. 2006. Molecular phylogeny and systematics of the Pieridae (Lepidoptera: Papilionoidea): higher classification and biogeography. Zool J Linn Soc. 147:239-275.
4. Briscoe AD. 2001. Functional diversification of lepidopteran opsins following gene duplication. Mol Biol Evol. 18:2270-2279.
5. Chad Gore J, Schal C. 2005. Expression, production and excretion of Bla g 1, a major human allergen, in relation to food intake in the German cockroach, Blattella germanica. Med Vet Entomol. 127-134.
6. Chew FS, Watt WB. 2006. The green-veined white (Pieris napi L.), its Pierine relatives, and the systematics dilemmas of divergent character sets (Lepidoptera, Pieridae). Biol J Linn Soc. 88:413-435.
7. Felsenstein J. 2004. Inferring phylogenies. Sunderland (MA): Sinauer Associates.
8. Force A, Lynch M, Postlethwait J. 1999. Preservation of duplicate genes by subfunctionalization. Genetics. 151:1531-1545.
9. Gould SJ, Vrba ES. 1982. Exaptation - a missing term in the science of form. Paleobiology. 8:4-15.
10. Halkier BA, Gershenzon J. 2006. Biology and biochemistry of glucosinolates. Annu Rev Plant Biol. 57:303-333.
11. Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program fro Windows 95/98/ NT. Nucleic Acids Symp Ser. 41:95-98.
12. He XL, Zhang JZ. 2005. Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics. 169:1157-1164.
13. Heidel AJ, Clauss MJ, Kroymann J, Savolainen O, Mitchell-Olds T. 2006. Natural variation in MAM within and between populations of Arabidopsis lyrata determines glucosinolate phenotype. Genetics. 173:1629-1636.
14. Jordan IK, Wolf YI, Koonin EV. 2004. Duplicated genes evolve slower than singletons despite the initial rate increase. BMC Evol Biol. 4:22.
15. Kawahara R, Nishida M. 2007. Extensive lineage-specific gene duplication and evolution of the spiggin multi-gene family in stickleback. BMC Evol. Biol. 7:209.
16. Koroleva OA, Davies A, Deeken R, Thorpe MR, Tomos AD, Hedrich R. 2000. Identification of a new glucosinolate-rich cell type in Arabidopsis flower stalk. Plant Physiol. 124:599-608.
17. Kroymann J, Donnerhacke S, Schnabelrauch D, Mitchell-Olds T. 2003. Evolutionary dynamics of an Arabidopsis insect resistance quantitative trait locus. Proc Natl Acad Sci USA. 100:14587-14592.
18. Kroymann J, Textor S, Tokuhisa JG, Falk KL, Bartram S, Gershenzon J, Mitchell-Olds T. 2001. A gene controlling variation in Arabidopsis glucosinolate composition is part of the methionine chain elongation pathway. Plant Physiol. 127:1077-1088.
19. Lynch M. 2002. Genomics - gene duplication and evolution. Science. 297:945-947.
20. Lynch M, Conery JS. 2000. The evolutionary fate and consequences of duplicate genes. Science. 290:1151-1155.
21. Maischak H, Grigoriev PA, Vogel H, Boland W, Mithöfer A. 2007. Oral secretion from herbivores lepidopteran larvae exhibit ion channel forming activities. FEBS Lett. 581:898-904.
22. Nei M, Rooney AP. 2005. Concerted and birth-and-death evolution of multigene families. Annu Rev Genet. 39:121-152.
23. Nury H, Dahout-Gonzalez C, Trezeguet V, Lauquin GJM, Brandolin G, Pebay-Peyroula E. 2006. Relations between structure and function of the mitochondrial ADP/ATP carrier. Annu Rev Biochem. 75:713-741.
24. Ohno S. 1970. Evolution by gene duplication. New York: Springer.
25. Pearson K, Saito H, Woods SC, Lund-Katz S, Tso P, Phillips MC, Davidson WS. 2004. Structure of human apolipoprotein A-IV: a distinct domain architecture among exchangeable apolipoproteins with potential functional implications. Biochemistry (Mosc). 43:10719-10729.
26. Pomes A, Melen E, Vailes LD, Retief JD, Arruda LK, Chapman MD. 1998. Novel allergen structures with tandem amino acid repeats derived from German and American cockroach. J Biol Chem. 273:30801-30807.
27. Ponting CP, Mott R, Bork P, Copley RR. 2001. Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution. Genome Res. 11:1996-2008.
28. Posada D, Crandall KA. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics. 14:817-818.
29. Rastogi S, Liberles DA. 2005. Subfunctionalization of duplicated genes as a transition state to neofunctionalization. BMC Evol Biol. 5:28.
30. Ratzka A, Vogel H, Kliebenstein DJ, Mitchell-Olds T, Kroymann J. 2002. Disarming the mustard oil bomb. Proc Natl Acad Sci USA. 99:11223-11228.
31. Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 19:1572-1574.
32. Rost B, Yachdav G, Liu J. 2004. The PredictProtein server. Nucleic Acids Res. 32:W321-W326 (Web Server Issue).
33. Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics. 19:2496-2497.
34. Shao L, Devenport M, Fujioka H, Ghosh A, Jacobs-Lorena M. 2005. Identification and characterization of a novel peritrophic matrix protein, Ae-Aper50, and the microvillar membrane protein, AEG12, from the mosquito, Aedes aegypti. Insect Biochem Mol Biol. 35:947-959.
35. Spaethe J, Briscoe AD. 2004. Early duplication and functional diversification of the opsin gene family in insects. Mol Biol Evol. 21:1583-1594.
36. Swofford DL. 2003. PAUP: phylogenetic analysis using parsimony. Sunderland (MA): Sinauer Assocoiates.
37. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgens DG. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Research. 25:4876-4882.
38. Wang NM, Lee MF, Wu CH. 1999. Immunologic characterization of a recombinant American cockroach (Periplaneta americana) Per a 1 (Cr-PII) allergen. Allergy. 54:119-127.
39. Wen ZM, Rupasinghe S, Niu GD, Berenbaum MR, Schuler MA. 2006. CYP6B1 and CYP6B3 of the black swallowtail (Papilio polyxenes): adaptive evolution through subfunctionalization. Mol Biol Evol. 23:2434-2443.
40. Wheat CW, Vogel H, Wittstock U, Braby M, Underwood D, Mitchell-Olds T. 2007. The genetic basis of a plant-insect coevolutionary key innovation. Proc Natl Acad Sci USA. 104:20427-20431.
41. Windsor AJ, Reichelt M, Figuth A, Svatos A, Kroymann J, Kliebenstein DJ, Gershenzon J, Mitchell-Olds T. 2005. Geographic and evolutionary diversification of glucosinolates among near relatives of Arabidopsis thaliana (Brassicaceae). Phytochemistry. 66:1321-1333.
42. Wittstock U, Agerbirk N, Stauber EJ, Olsen CE, Hippler M, Mitchell-Olds T, Gershenson J, Vogel H. 2004. Successful herbivore attack due to metabolic diversion of a plant chemical defense. Proc Natl Acad Sci USA. 101:4859-4864.
43. Yang ZH. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci. 13:555-556.
44. Zhang Z, Kishino H. 2004. Genomic background predicts the fate of duplicated genes: evidence from the yeast genome. Genetics. 166:1995-1999.