-
1
-
-
0002281363
-
The part played by recurrent mutation in evolution
-
Haldane JBS: The part played by recurrent mutation in evolution. Am Nat 1933, 67:5-19.
-
(1933)
Am Nat
, vol.67
, pp. 5-19
-
-
Haldane, J.B.S.1
-
2
-
-
0000357469
-
The possible modification of the response of the wild type to recurrent mutations
-
Fisher RA: The possible modification of the response of the wild type to recurrent mutations. Am Nat 1928, 62:115-126.
-
(1928)
Am Nat
, vol.62
, pp. 115-126
-
-
Fisher, R.A.1
-
3
-
-
0002725360
-
Chemical paleogenetics: Molecular restoration studies of extinct forms of life
-
Pauling L, Zuckerkandl E: Chemical paleogenetics: molecular restoration studies of extinct forms of life. Acta Chem Scand 1963, 17:S9-S16.
-
(1963)
Acta Chem Scand
, vol.17
-
-
Pauling, L.1
Zuckerkandl, E.2
-
4
-
-
0003515251
-
-
Berlin-Heidelberg-New York, Springer-Verlag
-
Ohno S: Evolution by gene duplication. Berlin-Heidelberg-New York, Springer-Verlag; 1970.
-
(1970)
Evolution by Gene Duplication
-
-
Ohno, S.1
-
5
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch M, Conery JS: The evolutionary fate and consequences of duplicate genes. Science 2000, 290:1151-1155.
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
7
-
-
0141853996
-
Asymmetric sequence divergence of duplicate genes
-
Conant GC, Wagner A: Asymmetric sequence divergence of duplicate genes. Genome Res 2003, 13:2052-2058.
-
(2003)
Genome Res
, vol.13
, pp. 2052-2058
-
-
Conant, G.C.1
Wagner, A.2
-
8
-
-
0642373709
-
Different evolutionary patterns between young duplicate genes in the human genome
-
Zhang P, Gu Z, Li WH: Different evolutionary patterns between young duplicate genes in the human genome. Genome Biol 2003, 4:R56.
-
(2003)
Genome Biol
, vol.4
-
-
Zhang, P.1
Gu, Z.2
Li, W.H.3
-
11
-
-
0033972072
-
The probability of duplicate gene preservation by subfunctionalization
-
Lynch M, Force A: The probability of duplicate gene preservation by subfunctionalization. Genetics 2000, 154:459-473.
-
(2000)
Genetics
, vol.154
, pp. 459-473
-
-
Lynch, M.1
Force, A.2
-
12
-
-
0035697435
-
The probability of preservation of a newly arisen gene duplicate
-
Lynch M, O'Hely M, Walsh B, Force A: The probability of preservation of a newly arisen gene duplicate. Genetics 2001, 159:1789-1804.
-
(2001)
Genetics
, vol.159
, pp. 1789-1804
-
-
Lynch, M.1
O'Hely, M.2
Walsh, B.3
Force, A.4
-
13
-
-
3342936636
-
Positive selection and subfunctionalization of duplicated CCT chaperonin subunits
-
Fares MA, Wolfe KH: Positive selection and subfunctionalization of duplicated CCT chaperonin subunits. Mol Biol Evol 2003, 20:1588-1597.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 1588-1597
-
-
Fares, M.A.1
Wolfe, K.H.2
-
14
-
-
0242383977
-
Retention of enzyme gene duplicates by subfunctionalization
-
Braun FN, Liberles DA: Retention of enzyme gene duplicates by subfunctionalization. Int J Biol Macromol 2003, 33:19-22.
-
(2003)
Int J Biol Macromol
, vol.33
, pp. 19-22
-
-
Braun, F.N.1
Liberles, D.A.2
-
15
-
-
0037384351
-
Duplication, degeneration and subfunctionalization of the nested synapsin-Timp genes in Fugu
-
Yu WP, Brenner S, Venkatesh B: Duplication, degeneration and subfunctionalization of the nested synapsin-Timp genes in Fugu. Trends Genet 2003, 19:180-183.
-
(2003)
Trends Genet
, vol.19
, pp. 180-183
-
-
Yu, W.P.1
Brenner, S.2
Venkatesh, B.3
-
16
-
-
0036265853
-
Subfunctionalization of duplicate mitf genes associated with differential degeneration of alternative exons in fish
-
Altschmied J, Delfgaauw J, Wilde B, Duschl J, Bouneau L, Volff JN, Schartl M: Subfunctionalization of duplicate mitf genes associated with differential degeneration of alternative exons in fish. Genetics 2002, 161:259-267.
-
(2002)
Genetics
, vol.161
, pp. 259-267
-
-
Altschmied, J.1
Delfgaauw, J.2
Wilde, B.3
Duschl, J.4
Bouneau, L.5
Volff, J.N.6
Schartl, M.7
-
17
-
-
0034799277
-
Analysing gene function after duplication
-
Massingham T, Davies LJ, Lio P: Analysing gene function after duplication. Bioessays 2001, 23:873-876.
-
(2001)
Bioessays
, vol.23
, pp. 873-876
-
-
Massingham, T.1
Davies, L.J.2
Lio, P.3
-
18
-
-
0037387451
-
Significantly different patterns of amino acid replacement after gene duplication as compared to after speciation
-
Seoighe C, Johnston CR, Shields DC: Significantly different patterns of amino acid replacement after gene duplication as compared to after speciation. Mol Biol Evol 2003, 20:484-490.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 484-490
-
-
Seoighe, C.1
Johnston, C.R.2
Shields, D.C.3
-
19
-
-
0030660581
-
A genomic perspective on protein families
-
Tatusov RL, Koonin EV, Lipman DJ: A genomic perspective on protein families. Science 1997, 278:631-637.
-
(1997)
Science
, vol.278
, pp. 631-637
-
-
Tatusov, R.L.1
Koonin, E.V.2
Lipman, D.J.3
-
20
-
-
0035861990
-
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
-
Remm M, Storm CE, Sonnhammer EL: Automatic clustering of orthologs and in-paralogs from pairwise species comparisons. J Mol Biol 2001, 314:1041-1052.
-
(2001)
J Mol Biol
, vol.314
, pp. 1041-1052
-
-
Remm, M.1
Storm, C.E.2
Sonnhammer, E.L.3
-
21
-
-
0036595544
-
Microevolutionary genomics of bacteria
-
Jordan IK, Rogozin IB, Wolf YI, Koonin EV: Microevolutionary genomics of bacteria. Theor Popul Biol 2002, 61:435-447.
-
(2002)
Theor Popul Biol
, vol.61
, pp. 435-447
-
-
Jordan, I.K.1
Rogozin, I.B.2
Wolf, Y.I.3
Koonin, E.V.4
-
22
-
-
0036737630
-
Impact of the presence of paralogs on sequence divergence in a set of mousehuman orthologs
-
Nembaware V, Crum K, Kelso J, Seoighe C: Impact of the presence of paralogs on sequence divergence in a set of mousehuman orthologs. Genome Res 2002, 12:1370-1376.
-
(2002)
Genome Res
, vol.12
, pp. 1370-1376
-
-
Nembaware, V.1
Crum, K.2
Kelso, J.3
Seoighe, C.4
-
23
-
-
0038708556
-
Rate of protein evolution versus fitness effect of gene deletion
-
Yang J, Gu Z, Li WH: Rate of protein evolution versus fitness effect of gene deletion. Mol Biol Evol 2003, 20:772-774.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 772-774
-
-
Yang, J.1
Gu, Z.2
Li, W.H.3
-
24
-
-
0042902833
-
The COG database: An updated version includes eukaryotes
-
Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, Koonin EV, Krylov DM, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Smirnov S, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA: The COG database: an updated version includes eukaryotes. BMC Bioinformatics 2003, 4:41.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 41
-
-
Tatusov, R.L.1
Fedorova, N.D.2
Jackson, J.D.3
Jacobs, A.R.4
Kiryutin, B.5
Koonin, E.V.6
Krylov, D.M.7
Mazumder, R.8
Mekhedov, S.L.9
Nikolskaya, A.N.10
Rao, B.S.11
Smirnov, S.12
Sverdlov, A.V.13
Vasudevan, S.14
Wolf, Y.I.15
Yin, J.J.16
Natale, D.A.17
-
25
-
-
16444381885
-
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
-
Koonin EV, Fedorova ND, Jackson JD, Jacobs AR, Krylov DM, Makarova KS, Mazumder R, Mekhedov SL, Nikolskaya AN, Rao BS, Rogozin IB, Smirnov S, Sorokin AV, Sverdlov AV, Vasudevan S, Wolf YI, Yin JJ, Natale DA: A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes. Genome Biol 2004, 5:R7.
-
(2004)
Genome Biol
, vol.5
-
-
Koonin, E.V.1
Fedorova, N.D.2
Jackson, J.D.3
Jacobs, A.R.4
Krylov, D.M.5
Makarova, K.S.6
Mazumder, R.7
Mekhedov, S.L.8
Nikolskaya, A.N.9
Rao, B.S.10
Rogozin, I.B.11
Smirnov, S.12
Sorokin, A.V.13
Sverdlov, A.V.14
Vasudevan, S.15
Wolf, Y.I.16
Yin, J.J.17
Natale, D.A.18
-
26
-
-
0038157152
-
Dosage sensitivity and the evolution of gene families in yeast
-
Papp B, Pal C, Hurst LD: Dosage sensitivity and the evolution of gene families in yeast. Nature 2003, 424:194-197.
-
(2003)
Nature
, vol.424
, pp. 194-197
-
-
Papp, B.1
Pal, C.2
Hurst, L.D.3
-
27
-
-
19344363466
-
Preferential duplication of conserved proteins in eukaryotic genomes
-
Davis JC, Petrov DA: Preferential duplication of conserved proteins in eukaryotic genomes. PLoS Biol 2004, 2:E55.
-
(2004)
PLoS Biol
, vol.2
-
-
Davis, J.C.1
Petrov, D.A.2
-
28
-
-
0024392448
-
Positive darwinian selection observed at the variable-region genes of immunoglobulins
-
Tanaka T, Nei M: Positive darwinian selection observed at the variable-region genes of immunoglobulins. Mol Biol Evol 1989, 6:447-459.
-
(1989)
Mol Biol Evol
, vol.6
, pp. 447-459
-
-
Tanaka, T.1
Nei, M.2
-
29
-
-
0031021191
-
Rapid evolution of immunoglobulin superfamily C2 domains expressed in immune system cells
-
Hughes AL: Rapid evolution of immunoglobulin superfamily C2 domains expressed in immune system cells. Mol Biol Evol 1997, 14:1-5.
-
(1997)
Mol Biol Evol
, vol.14
, pp. 1-5
-
-
Hughes, A.L.1
-
30
-
-
0036066765
-
The role of lineagespecific gene family expansion in the evolution of eukaryotes
-
Lespinet O, Wolf YI, Koonin EV, Aravind L: The role of lineagespecific gene family expansion in the evolution of eukaryotes. Genome Res 2002, 12:1048-1059.
-
(2002)
Genome Res
, vol.12
, pp. 1048-1059
-
-
Lespinet, O.1
Wolf, Y.I.2
Koonin, E.V.3
Aravind, L.4
-
31
-
-
0037245984
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Wheeler DL: GenBank. Nucleic Acids Res 2003, 31:23-27.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 23-27
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
32
-
-
13444254443
-
-
GenBank: . [http://www.ncbi.nlm.nih.gov].
-
GenBank
-
-
-
33
-
-
0030623948
-
SEALS: A system for easy analysis of lots of sequences
-
Walker DR, Koonin EV: SEALS: a system for easy analysis of lots of sequences. Ismb 1997, 5:333-339.
-
(1997)
Ismb
, vol.5
, pp. 333-339
-
-
Walker, D.R.1
Koonin, E.V.2
-
34
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
36
-
-
0028286120
-
Variance and covariances of the numbers of synonymous and nonsynonymous substitutions per site
-
Ota T, Nei M: Variance and covariances of the numbers of synonymous and nonsynonymous substitutions per site. Mol Biol Evol 1994, 11:613-619.
-
(1994)
Mol Biol Evol
, vol.11
, pp. 613-619
-
-
Ota, T.1
Nei, M.2
-
37
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M, Gojobori T: Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 1986, 3:418-426.
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
38
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang Z: PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 1997, 13:555-556.
-
(1997)
Comput Appl Biosci
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
39
-
-
13444256675
-
-
KOGs: . [http://www.ncbi.nlm.nih.gov/COG].
-
-
-
|