Genetic and molecular basis of quantitative trait loci of arthritis in rat: Genes and polymorphisms

Journal of Immunology

Volumn 181, Issue 2, 2008, Pages 859-864

  Xiong, Qing ^a,b   Jiao, Yan ^a   Hasty, Karen A ^a,c   Stuart, John M ^a,c   Postlethwaite, Arnold ^a,c   Kang, Andrew H ^a,c   Gu, Weikuan ^a,c  

^a UNIVERSITY OF TENNESSEE HEALTH SCIENCE CENTER   (United States)

^b SOUTHWEST UNIVERSITY   (China)

^c VETERANS AFFAIRS MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOIMMUNE DISEASE; CHROMOSOME; GENE IDENTIFICATION; GENE SEQUENCE; GENE STRUCTURE; GENETIC LINKAGE; GENETIC POLYMORPHISM; GENOME ANALYSIS; NONHUMAN; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; RHEUMATOID ARTHRITIS; SHORT SURVEY; ANIMAL; ARTHRITIS; ARTICLE; DISEASE MODEL; GENETIC PREDISPOSITION; GENETICS; IMMUNOLOGY; RAT;

ANIMALS; ARTHRITIS, EXPERIMENTAL; ARTHRITIS, RHEUMATOID; DISEASE MODELS, ANIMAL; GENETIC PREDISPOSITION TO DISEASE; POLYMORPHISM, GENETIC; QUANTITATIVE TRAIT LOCI; RATS;

EID: 49049122301     PISSN: 00221767     EISSN: 15506606     Source Type: Journal    
DOI: 10.4049/jimmunol.181.2.859     Document Type: Short Survey

References (33)

1. MacGregor, A. J., H. Snieder, A. S. Rigby, M. Koskenvuo, J. Kaprio, K. Aho, and A. J. Silman. 2000. Characterizing the quantitative genetic contribution to rheumatoid arthritis using data from twins. Arthritis Rheum. 43: 30-37.
2. Gregersen, P. K. 2005. Pathways to gene identification in rheumatoid arthritis: PTPN22 and beyond. Immunol. Rev. 204: 74-86.
3. Gregersen, P. K. 1999. Genetics of rheumatoid arthritis: confronting complexity. Arthritis Res. 1: 37-44. (Pubitemid 32223665)
4. Joe, B. 2006. Quest for arthritis-causative genetic factors in the rat. Physiol. Genomics 27: 1-11. (Pubitemid 44511820)
5. Olofsson, P., J. Holmberg, J. Tordsson, S. Lu, B. Akerstrom, and R. Holmdahl. 2003. Positional identification of Ncf1 as a gene that regulates arthritis severity in rats. Nat. Genet. 33: 25-32. (Pubitemid 36068678)
6. Lander, E., and L. Kruglyak. 1995. Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results. Nat. Genet. 11: 241-247.
7. van Ooijen, J. W. 1992. Accuracy of mapping quantitative trait loci in autogamous species. Theor. Appl. Genet. 84: 803-811.
8. Remmers, E. F., R. E. Longman, Y. Du, A. O'Hare, G. W. Cannon, M. M. Griffiths, and R. L. Wilder. 1996. A genome scan localizes five non-MHC loci controlling collagen- induced arthritis in rats. Nat. Genet. 14: 82-85.
9. Furuya, T., J. L. Salstrom, S. McCall-Vining, G. W. Cannon, B. Joe, E. F. Remmers, M. M. Griffiths, and R. L. Wilder. 2000. Genetic dissection of a rat model for rheumatoid arthritis: significant gender influences on autosomal modifier loci. Hum. Mol. Genet. 9: 2241-2250. (Pubitemid 30738387)
10. Olofsson, P., S. Lu, J. Holmberg, T. Song, P. Wernhoff, U. Pettersson, and R. Holmdahl. 2003. A comparative genetic analysis between collagen-induced arthritis and pristane-induced arthritis. Arthritis Rheum. 48: 2332-2342. (Pubitemid 36959216)
11. Nordquist, N., P. Olofsson, C. Vingsbo-Lundberg, U. Petterson, and R. Holmdahl. 2000. Complex genetic control in a rat model for rheumatoid arthritis. J. Autoimmun. 15: 425-432.
12. Lu, S., N. Nordquist, J. Holmberg, P. Olofsson, U. Pettersson, and R. Holmdahl. 2002. Both common and unique susceptibility genes in different rat strains with pristane-induced arthritis. Eur. J. Hum. Genet. 10: 475-483. (Pubitemid 34905817)
13. Gulko, P. S., Y. Kawahito, E. F. Remmers, V. R. Reese, J. Wang, S. V. Dracheva, L. Ge, R. E. Longman, J. S. Shepard, G. W. Cannon, et al. 1998. Identification of a new non-major histocompatibility complex genetic locus on chromosome 2 that controls disease severity in collagen-induced arthritis in rats. Arthritis Rheum. 41: 2122-2131.
14. Griffiths, M. M., J. Wang, B. Joe, S. Dracheva, Y. Kawahito, J. S. Shepard, V. R. Reese, S. McCall-Vining, A. Hashiramoto, G. W. Cannon, et al. 2000. Identification of four new quantitative trait loci regulating arthritis severity and one new quantitative trait locus regulating autoantibody production in rats with collagen-induced arthritis. Arthritis Rheum. 43: 1278-1289.
15. Kawahito, Y., G. W. Cannon, P. S. Gulko, E. F. Remmers, R. E. Longman, V. R. Reese, J. Wang, M. M. Griffiths, and R. L. Wilder. 1998. Localization of quantitative trait loci regulating adjuvant-induced arthritis in rats: evidence for genetic factors common to multiple autoimmune diseases. J. Immunol. 161: 4411-4419. (Pubitemid 28469028)
16. Lorentzen, J. C., A. Glaser, L. Jacobsson, J. Galli, H. Fakhrai-rad, L. Klareskog, and H. Luthman. 1998. Identification of rat susceptibility loci for adjuvant-oil-induced arthritis. Proc. Natl. Acad. Sci. USA 95: 6383-6387. (Pubitemid 28249021)
17. Jansson, A. M., L. Jacobsson, H. Luthman, and J. C. Lorentzen. 1999. Susceptibility to oil-induced arthritis is linked to Oia2 on chromosome 4 in a DA(DA × PVG. 1AV1) backcross. Transplant. Proc. 31: 1597-1599.
18. Vingsbo-Lundberg, C., N. Nordquist, P. Olofsson, M. Sundvall, T. Saxne, U. Pettersson, and R. Holmdahl. 1998. Genetic control of arthritis onset, severity and chronicity in a model for rheumatoid arthritis in rats. Nat. Genet. 20: 401-404. (Pubitemid 28541644)
19. Olofsson, P., J. Holmberg, U. Pettersson, and R. Holmdahl. 2003. Identification and isolation of dominant susceptibility loci for pristane-induced arthritis. J. Immunol. 171: 407-416. (Pubitemid 36745314)
20. Olofsson, P., N. Nordquist, C. Vingsbo-Lundberg, A. Larsson, C. Falkenberg, U. Pettersson, B. Akerstrom, and R. Holmdahl. 2002. Genetic links between the acute-phase response and arthritis development in rats. Arthritis Rheum. 46: 259-268. (Pubitemid 34121673)
21. Dracheva, S. V., E. F. Remmers, P. S. Gulko, Y. Kawahito, R. E. Longman, V. R. Reese, G. W. Cannon, M. M. Griffiths, and R. L. Wilder. 1999. Identification of a new quantitative trait locus on chromosome 7 controlling disease severity of collagen- induced arthritis in rats. Immunogenetics 49: 787-791.
22. Holm, B. C., H. W. Xu, L. Jacobsson, A. Larsson, H. Luthman, and J. C. Lorentzen. 2001. Rats made congenic for Oia3 on chromosome 10 become susceptible to squalene-induced arthritis. Hum. Mol. Genet. 10: 565-572.
23. Meng, H. C., M. M. Griffiths, E. F. Remmers, Y. Kawahito, W. Li, R. Neisa, G. W. Cannon, R. L. Wilder, and P. S. Gulko. 2004. Identification of two novel female-specific non-major histocompatibility complex loci regulating collagen-induced arthritis severity and chronicity, and evidence of epistasis. Arthritis Rheum. 50: 2695-2705.
24. Xiong, Q., Y. Qiu, and W. Gu. 2008. PGMapper: a web-based tool linking phenotype to genes. Bioinformatics 24: 1011-1013.
25. Brenner, M., H. C. Meng, N. C. Yarlett, B. Joe, M. M. Griffiths, E. F. Remmers, R. L. Wilder, and P. S. Gulko. 2005. The non-MHC quantitative trait locus Cia5 contains three major arthritis genes that differentially regulate disease severity, pannus formation, and joint damage in collagen- and pristane-induced arthritis. J. Immunol. 174: 7894-7903. (Pubitemid 40806299)
26. Kochi, Y., R. Yamada, A. Suzuki, J. B. Harley, S. Shirasawa, T. Sawada, S. C. Bae, S. Tokuhiro, X. Chang, A. Sekine, et al. 2005. A functional variant in FCRL3, encoding Fc receptor-like 3, is associated with rheumatoid arthritis and several autoimmunities. Nat. Genet. 37: 478-485. (Pubitemid 40617275)
27. Tokuhiro, S., R. Yamada, X. Chang, A. Suzuki, Y. Kochi, T. Sawada, M. Suzuki, M. Nagasaki, M. Ohtsuki, M. Ono, et al. 2003. An intronic SNP in a RUNX1 binding site of SLC22A4, encoding an organic cation transporter, is associated with rheumatoid arthritis. Nat. Genet. 35: 341-348. (Pubitemid 37486917)
28. Gupta, B., C. Agrawal, S. K. Raghav, S. K. Das, R. H. Das, V. P. Chaturvedi, and H. R. Das. 2005. Association of mannose-binding lectin gene (MBL2) polymorphisms with rheumatoid arthritis in an Indian cohort of case-control samples. J. Hum. Genet. 50: 583-591. (Pubitemid 41666978)
29. Begovich, A. B., V. E. Carlton, L. A. Honigberg, S. J. Schrodi, A. P. Chokkalingam, H. C. Alexander, K. G. Ardlie, Q. Huang, A. M. Smith, J. M. Spoerke, et al. 2004. A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritis. Am. J. Hum. Genet. 75: 330-337.
30. Kang, C. P., H. S. Lee, H. Ju, H. Cho, C. Kang, and S. C. Bae. 2006. A functional haplotype of the PADI4 gene associated with increased rheumatoid arthritis susceptibility in Koreans. Arthritis Rheum. 54: 90-96.
31. Remmers, E. F., R. M. Plenge, A. T. Lee, R. R. Graham, G. Hom, T. W. Behrens, P. I. de Bakker, J. M. Le, H. S. Lee, F. Batliwalla, et al. 2007. STAT4 and the risk of rheumatoid arthritis and systemic lupus erythematosus. N. Engl. J. Med. 357: 977-986. (Pubitemid 47367077)
32. Lee, H. S., E. F. Remmers, J. M. Le, D. L. Kastner, S. C. Bae, and P. K. Gregersen. 2007. Association of STAT4 with rheumatoid arthritis in the Korean population. Mol. Med. 13: 455-460. (Pubitemid 47585739)
33. Lamb, R., W. Thomson, E. M. Ogilvie, and R. Donn. 2007. Positive association of SLC26A2 gene polymorphisms with susceptibility to systemic-onset juvenile idiopathic arthritis. Arthritis Rheum. 56: 1286-1291. (Pubitemid 46608653)