-
1
-
-
0030792253
-
a structural classification of proteins database
-
T. Hubbard, A. Murzin, S. Brenner, and C. Chothia, "a structural classification of proteins database," Nucleic Acids Res., vol. 25, pp. 236-239, 1997.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 236-239
-
-
Hubbard, T.1
Murzin, A.2
Brenner, S.3
Chothia, C.4
-
2
-
-
19344372749
-
Gene duplication: The genomic trade in spare parts
-
M. Hurles, "Gene duplication: the genomic trade in spare parts," PloS. Biol., vol. 2, p. E206, 2004.
-
(2004)
PloS. Biol
, vol.2
-
-
Hurles, M.1
-
3
-
-
0037252683
-
-
M. B. A. et al., Cdd: a curated entrez database of conserved domain alignments, Nucleic Acids Res., 31, pp. 383-387, 2003.
-
M. B. A. et al., "Cdd: a curated entrez database of conserved domain alignments," Nucleic Acids Res., vol. 31, pp. 383-387, 2003.
-
-
-
-
4
-
-
0036799752
-
Inferring domain-domain interactions from protein-protein interactions
-
M. Deng, S. Mehta, F. Sun, and T. Chen, "Inferring domain-domain interactions from protein-protein interactions." Genome Res., vol. 12, pp. 1540-1548, 2002.
-
(2002)
Genome Res
, vol.12
, pp. 1540-1548
-
-
Deng, M.1
Mehta, S.2
Sun, F.3
Chen, T.4
-
5
-
-
0035166973
-
-
R. A. et al., The interpro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res., 29, pp. 37-40, 2001.
-
R. A. et al., "The interpro database, an integrated documentation resource for protein families, domains and functional sites." Nucleic Acids Res., vol. 29, pp. 37-40, 2001.
-
-
-
-
6
-
-
0037250151
-
Interdom: A database of putative interacting protein domains for validating predicated protein interactions and complexes
-
S. Ng, Z. Zhang, S. Tan, and K. Lin, "Interdom: a database of putative interacting protein domains for validating predicated protein interactions and complexes." Nucleic Acids Res., vol. 31, pp. 251-254, 2003.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 251-254
-
-
Ng, S.1
Zhang, Z.2
Tan, S.3
Lin, K.4
-
7
-
-
33645821051
-
-
D. Achila, L. Banci, I. Bertini, J. Bunce, S. Ciofi-Baffoni, and D. Huffman, "Structure of human wilson protein domains 5 and 6 and their interplay with domain 4 and the copper chaperone hah1 in copper uptake," vol. 103, no. 15, 2006, pp. 5729-5734.
-
(2006)
Structure of human wilson protein domains 5 and 6 and their interplay with domain 4 and the copper chaperone hah1 in copper uptake
, vol.103
, Issue.15
, pp. 5729-5734
-
-
Achila, D.1
Banci, L.2
Bertini, I.3
Bunce, J.4
Ciofi-Baffoni, S.5
Huffman, D.6
-
8
-
-
0028153705
-
Interplay of two functionally and structurally distinct domains of the c-fos au-rich element specifies its mrna-destabilizing function
-
C. C. T. Chen and A. Shyu, "Interplay of two functionally and structurally distinct domains of the c-fos au-rich element specifies its mrna-destabilizing function," Mol. Cell Biol., vol. 14, no. 1, pp. 416-426, 1994.
-
(1994)
Mol. Cell Biol
, vol.14
, Issue.1
, pp. 416-426
-
-
Chen, C.C.T.1
Shyu, A.2
-
9
-
-
0028262115
-
-
P. Devarajan, D. A. Scaramuzzino, and J. S. Morrow, "Ankyrin binds to two distinct cytoplasmic domains of na,k-atpase alpha subunit." vol. 91, no. 8, 1994, pp. 2965-2969.
-
(1994)
Ankyrin binds to two distinct cytoplasmic domains of na,k-atpase alpha subunit
, vol.91
, Issue.8
, pp. 2965-2969
-
-
Devarajan, P.1
Scaramuzzino, D.A.2
Morrow, J.S.3
-
10
-
-
21344441515
-
ntra-domain communication between the n-terminal and dna-binding domains of the androgen receptor: Modulation of androgen response element dna binding
-
J. Brodie and I. J. McEwan, "ntra-domain communication between the n-terminal and dna-binding domains of the androgen receptor: modulation of androgen response element dna binding," Journal of Molecular Endocrinology, vol. 34, pp. 603-615, 2005.
-
(2005)
Journal of Molecular Endocrinology
, vol.34
, pp. 603-615
-
-
Brodie, J.1
McEwan, I.J.2
-
11
-
-
0029841102
-
-
N. B. E. Ronne and K. Dano, Domain interplay in the urokinase receptor, J. Biol. Chem., 217, no. 37, pp. 22 885-22 894, 1996.
-
N. B. E. Ronne and K. Dano, "Domain interplay in the urokinase receptor," J. Biol. Chem., vol. 217, no. 37, pp. 22 885-22 894, 1996.
-
-
-
-
12
-
-
13444301479
-
Prespi: A domain combination based prediction system for protein-protein interaction
-
D.-S. Han, H.-S. Kim, W.-H. Jang, S.-D. Lee, and J.-K. Suh, "Prespi: a domain combination based prediction system for protein-protein interaction," Nucleic Acids Res., vol. 32, pp. 6312-6320, 2004.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6312-6320
-
-
Han, D.-S.1
Kim, H.-S.2
Jang, W.-H.3
Lee, S.-D.4
Suh, J.-K.5
-
13
-
-
33947394888
-
Systematic analysis of human kinase genes: A large number of genes and alternative splicing events result in functional and structural diversity
-
L. Milanesi, M. Petrillo, L. Sepe, A. Boccia, N. D'Agostino, M. Passamano, S. D. Nardo, G. Tasco, R. Casadio, and G. Paolella, "Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity," BMC Bioinformatic, vol. 6, no. 4, p. S20, 2005.
-
(2005)
BMC Bioinformatic
, vol.6
, Issue.4
-
-
Milanesi, L.1
Petrillo, M.2
Sepe, L.3
Boccia, A.4
D'Agostino, N.5
Passamano, M.6
Nardo, S.D.7
Tasco, G.8
Casadio, R.9
Paolella, G.10
-
14
-
-
0346494956
-
-
A. Krupa, K. Abhinandan, and N. S. and, A database of protein kinases in genomes, Nucleic Acids Res., 32, no. Database issue, pp. D153-D155, 2004.
-
A. Krupa, K. Abhinandan, and N. S. and, "A database of protein kinases in genomes," Nucleic Acids Res., vol. 32, no. Database issue, pp. D153-D155, 2004.
-
-
-
-
15
-
-
0035816218
-
Domain combinations in archaeal, eubacterial and eukaryotic proteomes
-
G. Apic, J. Gough, and S. Teichmann, "Domain combinations in archaeal, eubacterial and eukaryotic proteomes," J. Mol. Biol., vol. 310, pp. 311-325, 2001.
-
(2001)
J. Mol. Biol
, vol.310
, pp. 311-325
-
-
Apic, G.1
Gough, J.2
Teichmann, S.3
-
16
-
-
0035232163
-
An insight into domain combinations
-
_, "An insight into domain combinations," Bioinformatics, vol. 17, pp. 83-89, 2001.
-
(2001)
Bioinformatics
, vol.17
, pp. 83-89
-
-
Apic, G.1
Gough, J.2
Teichmann, S.3
-
17
-
-
33846041078
-
-
U. Consortium1, The universal protein resource (uniprot), Nucleic Acids Res., 35, no. Database issue, pp. D193-7, Jan 2007.
-
U. Consortium1, "The universal protein resource (uniprot)," Nucleic Acids Res., vol. 35, no. Database issue, pp. D193-7, Jan 2007.
-
-
-
-
18
-
-
33846116032
-
-
N. M. et al., New developments in the interpro database, Nucleic Acids Res., 35, no. Database issue, pp. D224-8, Jan 2007.
-
N. M. et al., "New developments in the interpro database," Nucleic Acids Res., vol. 35, no. Database issue, pp. D224-8, Jan 2007.
-
-
-
-
19
-
-
0034069495
-
-
T. G. O. Consortium, Gene ontology: tool for the unification of biolog, Nature Genet., 25, pp. 25-29, 2000.
-
T. G. O. Consortium, "Gene ontology: tool for the unification of biolog," Nature Genet., vol. 25, pp. 25-29, 2000.
-
-
-
-
20
-
-
0035575588
-
Small-molecule metabolism: An enzyme mosaic
-
S. Teichmann, S. Rison, J. Thornton, M. Riley, J. Gough, and C. Chothia, "Small-molecule metabolism: an enzyme mosaic," Biotechnol, vol. 19, pp. 482-486, 2001.
-
(2001)
Biotechnol
, vol.19
, pp. 482-486
-
-
Teichmann, S.1
Rison, S.2
Thornton, J.3
Riley, M.4
Gough, J.5
Chothia, C.6
-
21
-
-
0842268045
-
Supradomains: Evolutionary units larger than single protein domains
-
C. Vogel, C. Berzuini, M. Bashton, J. Gough, and S. Teichmann, "Supradomains: evolutionary units larger than single protein domains," J. Mol. Biol., vol. 336, no. 3, pp. 809-823, 2004.
-
(2004)
J. Mol. Biol
, vol.336
, Issue.3
, pp. 809-823
-
-
Vogel, C.1
Berzuini, C.2
Bashton, M.3
Gough, J.4
Teichmann, S.5
-
22
-
-
1542286754
-
Comparative analysis of protein domain organization
-
Y. Ye and A. Godzik, "Comparative analysis of protein domain organization." Genome Res., vol. 14, pp. 343-353, 2004.
-
(2004)
Genome Res
, vol.14
, pp. 343-353
-
-
Ye, Y.1
Godzik, A.2
-
23
-
-
15044350197
-
The evolution of domain arrangements in proteins and interaction networks
-
E. Bornberg-Bauer, F. Beaussart, S. Kummerfeld, S. Teichmann, and J. 3rd Weiner, "The evolution of domain arrangements in proteins and interaction networks." Cell Mol. Life Sci., vol. 62, no. 4, pp. 435-445, 2005.
-
(2005)
Cell Mol. Life Sci
, vol.62
, Issue.4
, pp. 435-445
-
-
Bornberg-Bauer, E.1
Beaussart, F.2
Kummerfeld, S.3
Teichmann, S.4
Weiner 3rd, J.5
-
24
-
-
0027621699
-
-
R. Agrawal, T. Imielinski, and A. Swami., Mining association rules between sets of items in large databases. Proceedings of the ACM SIGMOD International Conference, no. Management of Data, pp. 207-216, 1993.
-
R. Agrawal, T. Imielinski, and A. Swami., "Mining association rules between sets of items in large databases." Proceedings of the ACM SIGMOD International Conference, no. Management of Data, pp. 207-216, 1993.
-
-
-
-
27
-
-
30344461041
-
mplementation of a functional semantic similarity measure between gene-products
-
F. Couto, M. Silva, and P. Coutinho, "mplementation of a functional semantic similarity measure between gene-products," Department of Informatics, pp. 3-29, 2003.
-
(2003)
Department of Informatics
, pp. 3-29
-
-
Couto, F.1
Silva, M.2
Coutinho, P.3
-
28
-
-
2442499624
-
Chop proteins into structural domain-like fragments
-
J. Liu and B. Rost, "Chop proteins into structural domain-like fragments." Proteins, vol. 55, pp. 678-688, 2004.
-
(2004)
Proteins
, vol.55
, pp. 678-688
-
-
Liu, J.1
Rost, B.2
|