-
1
-
-
0035166973
-
The InterPro database, an integrated documentation resource for protein families, domains and functional sites
-
Apweiler,R., Attwood,T.K., Bairoch,A., Bateman,A., Birney,E., Biswas,M., Bucher,P., Cerutti,L., Corpet,F., Croning,M.D. et al. (2001) The InterPro database, an integrated documentation resource for protein families, domains and functional sites. Nucleic Acids Res., 29, 37-40.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 37-40
-
-
Apweiler, R.1
Attwood, T.K.2
Bairoch, A.3
Bateman, A.4
Birney, E.5
Biswas, M.6
Bucher, P.7
Cerutti, L.8
Corpet, F.9
Croning, M.D.10
-
2
-
-
0033954256
-
The Protein Data Bank
-
Berman,H.M., Westbrook,J., Feng,Z., Gilliland,G., Bhat,T.N., Weissig,H., Shindyabu,I.N. and Bourne,B.E. et al. (2000) The Protein Data Bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyabu, I.N.7
Bourne, B.E.8
-
4
-
-
0035943340
-
Correlated sequence-signatures as markers of protein-protein interaction
-
Sprinzak,E. and Margalit,H. (2000) Correlated sequence-signatures as markers of protein-protein interaction. J. Mol. Biol., 311, 681-692.
-
(2000)
J. Mol. Biol.
, vol.311
, pp. 681-692
-
-
Sprinzak, E.1
Margalit, H.2
-
5
-
-
0036799752
-
Inferring domain-domain interactions from protein-protein interactions
-
Deng,M., Mehta,S., Sun,F. and Chen,T. (2002) Inferring domain-domain interactions from protein-protein interactions. Genome Res., 12, 1540-1548.
-
(2002)
Genome Res.
, vol.12
, pp. 1540-1548
-
-
Deng, M.1
Mehta, S.2
Sun, F.3
Chen, T.4
-
6
-
-
0033523989
-
Protein interaction maps for complete genomes based on gene fusion events
-
Enright,A.J., Iliopoulos,I., Kyrpides,N.C. and Ouzounis,C.A. (1999) Protein interaction maps for complete genomes based on gene fusion events. Nature, 402, 86-90.
-
(1999)
Nature
, vol.402
, pp. 86-90
-
-
Enright, A.J.1
Iliopoulos, I.2
Kyrpides, N.C.3
Ouzounis, C.A.4
-
7
-
-
0033618555
-
Detecting protein function and protein-protein interactions from genome sequences
-
Marcotte,E.M., Pellegrini,M., Ng,H.L., Rice,D.W., Yeates,D.O. and Eisenberg,D. (1999) Detecting protein function and protein-protein interactions from genome sequences. Science, 285, 751-753.
-
(1999)
Science
, vol.285
, pp. 751-753
-
-
Marcotte, E.M.1
Pellegrini, M.2
Ng, H.L.3
Rice, D.W.4
Yeates, D.O.5
Eisenberg, D.6
-
8
-
-
0037250151
-
InterDom: A database of putative interacting protein domains for validating predicated protein interactions and complexes
-
Ng,S., Zhang,Z., Tan,S. and Lin,K. (2003) InterDom: a database of putative interacting protein domains for validating predicated protein interactions and complexes. Nucleic Acids Res., 31, 251-254.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 251-254
-
-
Ng, S.1
Zhang, Z.2
Tan, S.3
Lin, K.4
-
10
-
-
0035023445
-
Prediction of protein-protein interaction from primary structure
-
Bock,J.R. and Gough,D.A. (2001) Prediction of protein-protein interaction from primary structure. Bioinformatics, 17, 455-460.
-
(2001)
Bioinformatics
, vol.17
, pp. 455-460
-
-
Bock, J.R.1
Gough, D.A.2
-
11
-
-
0035224503
-
Protein-protein interaction map inference using interacting domain profile pairs
-
Wojcik,J. and Schachter,V. (2001) Protein-protein interaction map inference using interacting domain profile pairs. Bioinformatics 17 (Suppl.), S296-S305.
-
(2001)
Bioinformatics
, vol.17
, Issue.SUPPL.
-
-
Wojcik, J.1
Schachter, V.2
-
12
-
-
4544222482
-
Domain combination based probabilistic framework for protein-protein interaction prediction
-
Han,D., Kim,H., Seo,J. and Jang,W. (2003) Domain combination based probabilistic framework for protein-protein interaction prediction. Genome Informatics, 14, 250-259.
-
(2003)
Genome Informatics
, vol.14
, pp. 250-259
-
-
Han, D.1
Kim, H.2
Seo, J.3
Jang, W.4
-
13
-
-
0347755535
-
The Database of Interacting Proteins: 2004 update
-
Salwinski,L., Miller,C.S., Smith,J.A., Petit,F.K., Bowie,J.W. and Eisenberg,D. (2004) The Database of Interacting Proteins: 2004 update. Nucleic Acids Res., 32, D449-D451.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Salwinski, L.1
Miller, C.S.2
Smith, J.A.3
Petit, F.K.4
Bowie, J.W.5
Eisenberg, D.6
-
14
-
-
0036580169
-
Protein interactions: Two methods for assessment of the reliability of high throughput observations
-
Deane,C.M., Salwinski,L., Xenarios,I. and Eisenberg,D. (2002) Protein interactions: two methods for assessment of the reliability of high throughput observations. Mol. Cell. Proteomics, 1, 349-356.
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 349-356
-
-
Deane, C.M.1
Salwinski, L.2
Xenarios, I.3
Eisenberg, D.4
-
15
-
-
0037050004
-
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry
-
Ho,Y., Gruhler,A., Heilbut,A., Bader,G.D., Moore,L., Adams,S.L., Millar,A., Taylor,P., Bennet,K., Boutilier,K. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature, 415, 180-183.
-
(2002)
Nature
, vol.415
, pp. 180-183
-
-
Ho, Y.1
Gruhler, A.2
Heilbut, A.3
Bader, G.D.4
Moore, L.5
Adams, S.L.6
Millar, A.7
Taylor, P.8
Bennet, K.9
Boutilier, K.10
-
16
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin,A.C., Bosche,M., Krause,R., Grandi,P., Marzioch,M., Baver,A., Shultz,J., Rick,J.M., Michon,A.M., Cruciat,C.M. et al. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature, 415, 141-147.
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
Baver, A.6
Shultz, J.7
Rick, J.M.8
Michon, A.M.9
Cruciat, C.M.10
-
17
-
-
0035970298
-
Mapping protein family interactions: Intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast
-
Park,J., Lappe,M. and Teichmann,S. (2001) Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast. J. Mol. Biol., 307 929-938.
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 929-938
-
-
Park, J.1
Lappe, M.2
Teichmann, S.3
-
18
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin,A.G., Brenner,S.E., Hubbard,T. and Chothia,C. (1995) SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol., 247 536-540.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
19
-
-
0029918694
-
FSSP database: Fold classification based on structure-structure alignment of proteins
-
Holm,L. and Sander,C. (1996) FSSP database: fold classification based on structure-structure alignment of proteins. Nucleic Acids Res., 24, 206-210.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 206-210
-
-
Holm, L.1
Sander, C.2
-
20
-
-
0033985050
-
Assigning genomic sequences to CATH
-
Pearl,F.M.G., Lee,D., Bray,J.E., Sillitoe,I., Todd,A.E., Harrison,A.P., Thornton,J.M. and Orengo,C.A. (2000) Assigning genomic sequences to CATH. Nucleic Acids Res., 28, 277-282.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 277-282
-
-
Pearl, F.M.G.1
Lee, D.2
Bray, J.E.3
Sillitoe, I.4
Todd, A.E.5
Harrison, A.P.6
Thornton, J.M.7
Orengo, C.A.8
-
21
-
-
0037161731
-
Comparative assessment of large-scale data sets of protein-protein interactions
-
Mering,V.C., Krause,R., Snel,B., Cornell,M., Oliver,S.G., Fields,S.G. and Bork,P. (2002) Comparative assessment of large-scale data sets of protein-protein interactions. Nature, 417, 399-403.
-
(2002)
Nature
, vol.417
, pp. 399-403
-
-
Mering, V.C.1
Krause, R.2
Snel, B.3
Cornell, M.4
Oliver, S.G.5
Fields, S.G.6
Bork, P.7
-
22
-
-
0642343787
-
Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair
-
Kim,W., Park,J. and Suh,J. (2002) Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair. Genome Informatics, 13, 42-50.
-
(2002)
Genome Informatics
, vol.13
, pp. 42-50
-
-
Kim, W.1
Park, J.2
Suh, J.3
-
23
-
-
0038296186
-
IPPRED: Server for proteins interactions inference
-
Goffard,N., Iragne,F., Groppi,A. and de Daruvar,A. (2003) IPPRED: server for proteins interactions inference. Bioinformatics, 19, 903-904.
-
(2003)
Bioinformatics
, vol.19
, pp. 903-904
-
-
Goffard, N.1
Iragne, F.2
Groppi, A.3
de Daruvar, A.4
|