메뉴 건너뛰기




Volumn 14, Issue 6, 2007, Pages 283-290

Restriction site-dependent PCR: An efficient technique for fast cloning of new genes of microorganisms

Author keywords

Degenerated primer; New gene cloning; Polymerase chain reaction

Indexed keywords

PRIMER DNA;

EID: 47149098214     PISSN: 13402838     EISSN: 17561663     Source Type: Journal    
DOI: 10.1093/dnares/dsm023     Document Type: Article
Times cited : (12)

References (29)
  • 1
    • 0023787609 scopus 로고
    • A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences
    • Triglia, T., Peter, M. G. and Kemp, D. J. 1988, A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences, Nucleic Acids Res., 16, 8186.
    • (1988) Nucleic Acids Res , vol.16 , pp. 8186
    • Triglia, T.1    Peter, M.G.2    Kemp, D.J.3
  • 2
    • 0023691425 scopus 로고
    • Genetic application of an inverse polymerase chain reaction
    • Ochman, H., Gerber, A. S. and Hartl, D. L. 1988, Genetic application of an inverse polymerase chain reaction, Genetics, 120, 621-623.
    • (1988) Genetics , vol.120 , pp. 621-623
    • Ochman, H.1    Gerber, A.S.2    Hartl, D.L.3
  • 3
    • 0024324991 scopus 로고
    • Use of the yeast artificial chromosome clones for mapping and walking within human chromosome segment 18q21.3
    • Silverman, G. A., Ye, R. D., Pollock, K. M., Sadler, J. E. and Korsmeyer, S. J. 1989, Use of the yeast artificial chromosome clones for mapping and walking within human chromosome segment 18q21.3, Proc. Natl. Acad. Sci. USA, 86, 7485-7489.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 7485-7489
    • Silverman, G.A.1    Ye, R.D.2    Pollock, K.M.3    Sadler, J.E.4    Korsmeyer, S.J.5
  • 4
    • 16544378816 scopus 로고    scopus 로고
    • An inverse PCR technique to rapidly isolate the flanking DNA of dictyostelium insertion mutants
    • Keim, M., Williams, R. S. and Harwood, A. J. 2004, An inverse PCR technique to rapidly isolate the flanking DNA of dictyostelium insertion mutants, Mol. Biotechnol., 26, 221-224.
    • (2004) Mol. Biotechnol , vol.26 , pp. 221-224
    • Keim, M.1    Williams, R.S.2    Harwood, A.J.3
  • 5
    • 0024431684 scopus 로고
    • In vivo footprinting of a muscle specific enhancer by ligation mediated PCR
    • Mueller, P. R. and Wold, B. 1989, In vivo footprinting of a muscle specific enhancer by ligation mediated PCR, Science, 246, 780-786.
    • (1989) Science , vol.246 , pp. 780-786
    • Mueller, P.R.1    Wold, B.2
  • 6
    • 0025339588 scopus 로고
    • A novel, rapid method for isolation of terminal sequences from yeast artificial chromosome (YA C) clones
    • Riley, J., Butler, R., Ogilvie, D., Finniear, R., Jenner, D. and Powell, S. 1990, A novel, rapid method for isolation of terminal sequences from yeast artificial chromosome (YA C) clones, Nucleic Acid Res., 18, 2887-2890.
    • (1990) Nucleic Acid Res , vol.18 , pp. 2887-2890
    • Riley, J.1    Butler, R.2    Ogilvie, D.3    Finniear, R.4    Jenner, D.5    Powell, S.6
  • 7
    • 0025310675 scopus 로고
    • Genomic walking and sequencing by oligo-cassette mediated polymerase chain reaction
    • Rosenthal, A. and Jones, D. S. C. 1990, Genomic walking and sequencing by oligo-cassette mediated polymerase chain reaction, Nucleic Acids Res., 18, 3095-3096.
    • (1990) Nucleic Acids Res , vol.18 , pp. 3095-3096
    • Rosenthal, A.1    Jones, D.S.C.2
  • 8
    • 0026055451 scopus 로고
    • PCR walking from microdissection clone M54 identifies three exons from the human fene for the neural cell adhesion molecule L1 (CAM-L1)
    • Rosenthal, A., Mackinnon, R. N. and Jones, D. S. C. 1991, PCR walking from microdissection clone M54 identifies three exons from the human fene for the neural cell adhesion molecule L1 (CAM-L1), Nucleic Acids Res., 19, 5395-5401.
    • (1991) Nucleic Acids Res , vol.19 , pp. 5395-5401
    • Rosenthal, A.1    Mackinnon, R.N.2    Jones, D.S.C.3
  • 9
    • 0026718125 scopus 로고
    • Cloning and direct sequencing of plant promoters using primer adapter mediated PCR on DNA coupled to a magnetic solid phase
    • Espelund, M. and Jackobsen, K. S. 1992, Cloning and direct sequencing of plant promoters using primer adapter mediated PCR on DNA coupled to a magnetic solid phase, Biotechniques, 13, 74-81.
    • (1992) Biotechniques , vol.13 , pp. 74-81
    • Espelund, M.1    Jackobsen, K.S.2
  • 10
    • 0026595076 scopus 로고
    • Sequencing specific generation of a DNA panhandle permits PCR amplification of unknown flanking DNA
    • Jones, D. H. and Winistorfer, S. C. 1992, Sequencing specific generation of a DNA panhandle permits PCR amplification of unknown flanking DNA, Nucleic Acids Res., 20, 595-600.
    • (1992) Nucleic Acids Res , vol.20 , pp. 595-600
    • Jones, D.H.1    Winistorfer, S.C.2
  • 11
    • 0028042057 scopus 로고
    • A rapid genomic walking technique based on ligation-mediated PCR and magnetic separation technology
    • Warshawsky, D. and Miller, L. A. 1994, A rapid genomic walking technique based on ligation-mediated PCR and magnetic separation technology, Biotechniques, 16, 792-798.
    • (1994) Biotechniques , vol.16 , pp. 792-798
    • Warshawsky, D.1    Miller, L.A.2
  • 12
    • 27144477626 scopus 로고    scopus 로고
    • Direct sequencing of bacterial artificial chromosome (BACs) and prokaryotic genomes by biotin-capture PCR
    • Sterky, F., Holmberg, A., Alexandersson, G., Lundeberg, J. and Uhlen, M. 1998, Direct sequencing of bacterial artificial chromosome (BACs) and prokaryotic genomes by biotin-capture PCR, J. Biotechnol., 246, 810-813.
    • (1998) J. Biotechnol , vol.246 , pp. 810-813
    • Sterky, F.1    Holmberg, A.2    Alexandersson, G.3    Lundeberg, J.4    Uhlen, M.5
  • 13
    • 0033781609 scopus 로고    scopus 로고
    • Ligation-mediate PCR for quantitative in vivo footprinting
    • Dai, S. M., Chen, H. H., Chang, C., Riggs, A. D. and Flanagan, S. D. 2000, Ligation-mediate PCR for quantitative in vivo footprinting, Nat. Biotechnol., 18, 1108-1111.
    • (2000) Nat. Biotechnol , vol.18 , pp. 1108-1111
    • Dai, S.M.1    Chen, H.H.2    Chang, C.3    Riggs, A.D.4    Flanagan, S.D.5
  • 14
    • 1842835687 scopus 로고    scopus 로고
    • A 'step down' PCR-based technique for walking into and the subsequent direct-sequence analysis of flanking genomic DNA
    • Zhang, Z. and Gurr, S. J. 2002, A 'step down' PCR-based technique for walking into and the subsequent direct-sequence analysis of flanking genomic DNA, Methods Mol. Biol., 192, 343-350.
    • (2002) Methods Mol. Biol , vol.192 , pp. 343-350
    • Zhang, Z.1    Gurr, S.J.2
  • 15
    • 0037901773 scopus 로고    scopus 로고
    • T-lingker-specific ligation PCR (T-lingker PCR): An advanced PCR technique for chromosome walking or for isolation of tagged DNA ends
    • Yan, Y., An, C., Li, L., Gu, J., Tan, G. and Chen, Z. 2003, T-lingker-specific ligation PCR (T-lingker PCR): an advanced PCR technique for chromosome walking or for isolation of tagged DNA ends, Nucleic Acids Res., 31, e68.
    • (2003) Nucleic Acids Res , vol.31
    • Yan, Y.1    An, C.2    Li, L.3    Gu, J.4    Tan, G.5    Chen, Z.6
  • 16
    • 0033559113 scopus 로고    scopus 로고
    • Amplification of cDNA ends based on template-switching effect and step-out PCR
    • Matz, M., Shagin, D., Bogdanova, E., et al. 1999, Amplification of cDNA ends based on template-switching effect and step-out PCR, Nucleic Acids Res., 27, 1558-1560.
    • (1999) Nucleic Acids Res , vol.27 , pp. 1558-1560
    • Matz, M.1    Shagin, D.2    Bogdanova, E.3
  • 17
    • 0029812093 scopus 로고    scopus 로고
    • Full-length cDNA cloning and determination of mRNA 5′ and 3′ ends by amplification of adaptor-ligated cDNA
    • Chenchik, A., Diachenko, L., Moqadam, F., Tarabykin, V., Lukyanov, S. and Siebert, P. D. 1996, Full-length cDNA cloning and determination of mRNA 5′ and 3′ ends by amplification of adaptor-ligated cDNA, Biotechniques, 21, 526-534.
    • (1996) Biotechniques , vol.21 , pp. 526-534
    • Chenchik, A.1    Diachenko, L.2    Moqadam, F.3    Tarabykin, V.4    Lukyanov, S.5    Siebert, P.D.6
  • 18
  • 19
    • 0029360727 scopus 로고
    • Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR
    • Liu, Y., Mitsukawa, N., Oosumi, T. and Whittier, R. F. 1995, Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR, Plant J., 8, 457-463.
    • (1995) Plant J , vol.8 , pp. 457-463
    • Liu, Y.1    Mitsukawa, N.2    Oosumi, T.3    Whittier, R.F.4
  • 20
    • 8944252803 scopus 로고    scopus 로고
    • Random primed gene walking PCR: Simple procedure to retrieve nucleotide fragments adjacent to known DNA sequences
    • Trueba, G. A. and Johnson, R. C. 1996, Random primed gene walking PCR: simple procedure to retrieve nucleotide fragments adjacent to known DNA sequences, Biotechniques, 21, 20.
    • (1996) Biotechniques , vol.21 , pp. 20
    • Trueba, G.A.1    Johnson, R.C.2
  • 21
    • 0028949381 scopus 로고
    • Thermal asymmetric interlaced PCR: Automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking
    • Liu, Y. and Whitter, R. F. 1995, Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking, Genomics, 25, 674-681.
    • (1995) Genomics , vol.25 , pp. 674-681
    • Liu, Y.1    Whitter, R.F.2
  • 22
    • 0342927487 scopus 로고    scopus 로고
    • Activation tagging in Arabidopsis
    • Weigel, D., Ahn, J. H., Blazquenz, M. A., et al. 2000, Activation tagging in Arabidopsis, Plant Physiol., 122, 1003-1013.
    • (2000) Plant Physiol , vol.122 , pp. 1003-1013
    • Weigel, D.1    Ahn, J.H.2    Blazquenz, M.A.3
  • 23
    • 1542653185 scopus 로고    scopus 로고
    • High-throughput TAIL-PCR as a tool to identify DNA flanking insertions
    • Singer, T. and Burke, E. 2003, High-throughput TAIL-PCR as a tool to identify DNA flanking insertions, Methods Mol. Biol., 236, 241-272.
    • (2003) Methods Mol. Biol , vol.236 , pp. 241-272
    • Singer, T.1    Burke, E.2
  • 24
    • 7744234354 scopus 로고    scopus 로고
    • Single oligonucleotide nested PCR: A rapid method for the isolation of genes and their flanking regions from expressed sequence tags
    • Antal, Z., Rascle, C., Fevre, M. and Bruel, C. 2004, Single oligonucleotide nested PCR: a rapid method for the isolation of genes and their flanking regions from expressed sequence tags, Curr. Genet., 46, 240-246.
    • (2004) Curr. Genet , vol.46 , pp. 240-246
    • Antal, Z.1    Rascle, C.2    Fevre, M.3    Bruel, C.4
  • 25
    • 27144526458 scopus 로고    scopus 로고
    • SiteFinding-PCR: A simple and efficient PCR method for chromosome walking
    • Tan, G., Gao, Y., Shi, M., et al. 2005, SiteFinding-PCR: a simple and efficient PCR method for chromosome walking, Nucleic Acids Res., 33, e122.
    • (2005) Nucleic Acids Res , vol.33
    • Tan, G.1    Gao, Y.2    Shi, M.3
  • 26
    • 33748769254 scopus 로고    scopus 로고
    • Properties of xylanolytic enzyme system in bifidobacteria and their effects on the utilization of xylooligosaccharides
    • Zeng, H., Xue, Y., Peng, T. and Shao, W. 2007, Properties of xylanolytic enzyme system in bifidobacteria and their effects on the utilization of xylooligosaccharides, Food Chem., 101, 1172-1177.
    • (2007) Food Chem , vol.101 , pp. 1172-1177
    • Zeng, H.1    Xue, Y.2    Peng, T.3    Shao, W.4
  • 27
    • 0027992585 scopus 로고
    • Gene walking by unpredictably primed PCR
    • Dominguez, O. and Lopez-Larrea, C. 1994, Gene walking by unpredictably primed PCR, Nucleic Acids Res., 22, 3247-3248.
    • (1994) Nucleic Acids Res , vol.22 , pp. 3247-3248
    • Dominguez, O.1    Lopez-Larrea, C.2
  • 28
    • 0026343455 scopus 로고
    • polymerase chain reaction mediated by a single primer: Cloning of genomic sequences adjacent to a serotonin receptor protein coding region
    • Parks, C. L., Chang, L. S. and Shenk, T. A. 1991, polymerase chain reaction mediated by a single primer: cloning of genomic sequences adjacent to a serotonin receptor protein coding region, Nucleic Acids Res., 19, 7155-7160.
    • (1991) Nucleic Acids Res , vol.19 , pp. 7155-7160
    • Parks, C.L.1    Chang, L.S.2    Shenk, T.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.