-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul,S.F. et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
-
2
-
-
5144227841
-
Retroelements and the human genome: New perspectives on an old relation
-
Bannert,N. et al. (2004) Retroelements and the human genome: New perspectives on an old relation. Proc. Natl Acad. Sci. USA, 101 (Suppl. 2), 14572-14579.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, Issue.SUPPL. 2
, pp. 14572-14579
-
-
Bannert, N.1
-
3
-
-
1542748076
-
-
Aligning multiple genomic sequences with the threaded blockset aligner
-
Blanchette,M. et al. (2004) Aligning multiple genomic sequences with the threaded blockset aligner. Genome Res., 14, 708-715.
-
(2004)
Genome Res
, vol.14
, pp. 708-715
-
-
Blanchette, M.1
-
4
-
-
0033664432
-
Endogenous retroviruses and the human germline
-
Bock,M. et al. (2000) Endogenous retroviruses and the human germline. Curr. Opin. Genet. Dev., 10, 651-655.
-
(2000)
Curr. Opin. Genet. Dev
, vol.10
, pp. 651-655
-
-
Bock, M.1
-
5
-
-
0036468355
-
The human zoo: Endogenous retroviruses in the human genome
-
Bromham,L. (2002) The human zoo: Endogenous retroviruses in the human genome. Trends Ecol. Evol., 17, 91-97.
-
(2002)
Trends Ecol. Evol
, vol.17
, pp. 91-97
-
-
Bromham, L.1
-
6
-
-
0242331629
-
An endogenous retroviral long terminal repeat is the dominant promoter for human beta1,3-galactosyltransferase 5 in the colon
-
Dunn,C.A. et al. (2003) An endogenous retroviral long terminal repeat is the dominant promoter for human beta1,3-galactosyltransferase 5 in the colon. Proc. Natl Acad. Sci. USA, 100, 12841-12846.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 12841-12846
-
-
Dunn, C.A.1
-
7
-
-
32444436122
-
Transcription of two human genes from a bidirectional endogenous retrovirus promoter
-
Dunn,C.A. et al. (2006) Transcription of two human genes from a bidirectional endogenous retrovirus promoter. Gene, 366, 335-342.
-
(2006)
Gene
, vol.366
, pp. 335-342
-
-
Dunn, C.A.1
-
8
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE project
-
ENCODE Project Consortium
-
ENCODE Project Consortium (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE project. Nature, 447, 799-816.
-
(2007)
Nature
, vol.447
, pp. 799-816
-
-
-
9
-
-
25844449770
-
Galaxy: A platform for interactive large-scale genome analysis
-
Giardine,B. et al. (2005) Galaxy: A platform for interactive large-scale genome analysis. Genome Res., 15, 1451-1455.
-
(2005)
Genome Res
, vol.15
, pp. 1451-1455
-
-
Giardine, B.1
-
10
-
-
0037301560
-
Origin of a substantial fraction of human regulatory sequences from transposable elements
-
Jordan,I.K. et al. (2003) Origin of a substantial fraction of human regulatory sequences from transposable elements. Trends Genet. 19, 68-72.
-
(2003)
Trends Genet
, vol.19
, pp. 68-72
-
-
Jordan, I.K.1
-
11
-
-
0037250168
-
The UCSC genome browser database
-
Karolchik,D. et al. (2003) The UCSC genome browser database. Nucleic Acids Res., 31, 51-54.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 51-54
-
-
Karolchik, D.1
-
12
-
-
0347755531
-
The UCSC table browser data retrieval tool
-
Karolchik,D. et al. (2004) The UCSC table browser data retrieval tool. Nucleic Acids Res., 32, D493-D496.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Karolchik, D.1
-
13
-
-
0016669094
-
Evolution at two levels in humans and chimpanzees
-
King,M.C. et al. (1975) Evolution at two levels in humans and chimpanzees. Science, 188, 107-116.
-
(1975)
Science
, vol.188
, pp. 107-116
-
-
King, M.C.1
-
14
-
-
0033582482
-
The cloning and characterization of a new stress response protein. A mammalian member of a family of theta class glutathione s-transferase-like proteins
-
Kodym,R. et al. (1999) The cloning and characterization of a new stress response protein. A mammalian member of a family of theta class glutathione s-transferase-like proteins. J. Biol. Chem., 274 5131-5137.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 5131-5137
-
-
Kodym, R.1
-
15
-
-
19944424114
-
Polymorphisms in glutathione S-transferase omega-1 and AD, vascular dementia, and stroke
-
Kolsch,H. et al. (2004) Polymorphisms in glutathione S-transferase omega-1 and AD, vascular dementia, and stroke. Neurology, 63 2255-2260.
-
(2004)
Neurology
, vol.63
, pp. 2255-2260
-
-
Kolsch, H.1
-
16
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander,E.S. et al. (2001) Initial sequencing and analysis of the human genome. Nature, 409, 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
-
17
-
-
0346121529
-
Glutathione S-transferase omega-1 modifies age-at-onset of Alzheimer disease and Parkinson disease
-
Li,Y.J. et al. (2003) Glutathione S-transferase omega-1 modifies age-at-onset of Alzheimer disease and Parkinson disease. Hum. Mol. Genet., 12, 3259-3267.
-
(2003)
Hum. Mol. Genet
, vol.12
, pp. 3259-3267
-
-
Li, Y.J.1
-
18
-
-
23844534414
-
Impact of transposable elements on the evolution of mammalian gene regulation
-
Medstrand,P. et al. (2005) Impact of transposable elements on the evolution of mammalian gene regulation. Cytogenet. Genome Res., 110, 342-352.
-
(2005)
Cytogenet. Genome Res
, vol.110
, pp. 342-352
-
-
Medstrand, P.1
-
19
-
-
20844463584
-
Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation
-
Ng,P. et al. (2005) Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation. Nat. Methods, 2, 105-111.
-
(2005)
Nat. Methods
, vol.2
, pp. 105-111
-
-
Ng, P.1
-
20
-
-
33846057724
-
NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
Pruitt,K.D. et al. (2007) NCBI reference sequences (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res., 35, D61-D65.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Pruitt, K.D.1
-
21
-
-
33846556612
-
Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution
-
Romanish,M.T. et al. (2007) Repeated recruitment of LTR retrotransposons as promoters by the anti-apoptotic locus NAIP during mammalian evolution. PLoS Genet., 3, e10.
-
(2007)
PLoS Genet
, vol.3
-
-
Romanish, M.T.1
-
22
-
-
1842858905
-
GeneCards 2002: Towards a complete, object-oriented, human gene compendium
-
Safran,M. et al. (2002) GeneCards 2002: Towards a complete, object-oriented, human gene compendium. Bioinformatics, 18, 1542-1543.
-
(2002)
Bioinformatics
, vol.18
, pp. 1542-1543
-
-
Safran, M.1
-
23
-
-
0025282303
-
Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution
-
Samuelson,L.C. et al. (1990)Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution. Mol. Cell. Biol., 10, 2513-2520.
-
(1990)
Mol. Cell. Biol
, vol.10
, pp. 2513-2520
-
-
Samuelson, L.C.1
-
24
-
-
9144233601
-
Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage
-
Shiraki,T. et al. (2003) Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage. Proc. Natl Acad. Sci. USA, 100, 15776-15781.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 15776-15781
-
-
Shiraki, T.1
-
25
-
-
23744458086
-
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
-
Siepel,A. et al. (2005) Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res., 15 1034-1050.
-
(2005)
Genome Res
, vol.15
, pp. 1034-1050
-
-
Siepel, A.1
-
26
-
-
47049130123
-
-
Smit,A.F.A. et al. (1996-2004) RepeatMasker Open-3.0.
-
Smit,A.F.A. et al. (1996-2004) RepeatMasker Open-3.0.
-
-
-
-
27
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
Su,A.I. et al. (2004) A gene atlas of the mouse and human protein-encoding transcriptomes. Proc. Natl Acad Sci. USA, 101 6062-6067.
-
(2004)
Proc. Natl Acad Sci. USA
, vol.101
, pp. 6062-6067
-
-
Su, A.I.1
-
28
-
-
0033964662
-
Retroviruses and primate evolution
-
Sverdlov,E.D. (2000) Retroviruses and primate evolution. Bioessays 22, 161-171.
-
(2000)
Bioessays
, vol.22
, pp. 161-171
-
-
Sverdlov, E.D.1
-
29
-
-
0141561907
-
Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions
-
van de Lagemaat,L.N. et al. (2003) Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions. Trends Genet., 19, 530-536.
-
(2003)
Trends Genet
, vol.19
, pp. 530-536
-
-
van de Lagemaat, L.N.1
|