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Volumn 48, Issue 3, 2008, Pages 241-244

Performance of a population-based HIV-1 tropism phenotypic assay and correlation with V3 genotypic prediction tools in recent HIV-1 seroconverters

Author keywords

CCR5 antagonists; Drug resistance; HIV; Seroconversion; Tropism

Indexed keywords

CHEMOKINE RECEPTOR CCR5 ANTAGONIST; PROTEINASE INHIBITOR; RNA DIRECTED DNA POLYMERASE INHIBITOR; VIRUS RNA; VIRUS ENVELOPE PROTEIN;

EID: 47049096112     PISSN: 15254135     EISSN: None     Source Type: Journal    
DOI: 10.1097/QAI.0b013e3181734f0e     Document Type: Article
Times cited : (40)

References (29)
  • 1
    • 30744447460 scopus 로고    scopus 로고
    • Efficacy of short-term monotherapy with maraviroc, a new CCR5 antagonist, in patients infected with HIV-1
    • Fatkenheuer G, Pozniak A, Jonson M, et al. Efficacy of short-term monotherapy with maraviroc, a new CCR5 antagonist, in patients infected with HIV-1. Nat Med. 2005;11:1170-1172.
    • (2005) Nat Med , vol.11 , pp. 1170-1172
    • Fatkenheuer, G.1    Pozniak, A.2    Jonson, M.3
  • 2
    • 34347379935 scopus 로고    scopus 로고
    • Phase 2 study of the safety and efficacy of vicriviroc, a CCR5 inhibitor, in HIV-1-infected, treatment-experienced patients: AIDS Clinical Trials Group 5211
    • Gulick R, Su Z, Flexner C, et al. Phase 2 study of the safety and efficacy of vicriviroc, a CCR5 inhibitor, in HIV-1-infected, treatment-experienced patients: AIDS Clinical Trials Group 5211. J Infect Dis. 2007;196:304-312.
    • (2007) J Infect Dis , vol.196 , pp. 304-312
    • Gulick, R.1    Su, Z.2    Flexner, C.3
  • 3
    • 0033012398 scopus 로고    scopus 로고
    • Chemokine receptors as HIV-1 coreceptors: Role in viral entry, tropism, and disease
    • Berger E, Murphy P, Farber J. Chemokine receptors as HIV-1 coreceptors: role in viral entry, tropism, and disease. Annu Rev Immunol. 1999;17:657-700.
    • (1999) Annu Rev Immunol , vol.17 , pp. 657-700
    • Berger, E.1    Murphy, P.2    Farber, J.3
  • 4
    • 22544456536 scopus 로고    scopus 로고
    • Molecular and clinical epidemiology of CXCR4-using HIV-1 in a large population of antiretroviral naïve individuals
    • Brumme Z, Goodrich J, Mayer H, et al. Molecular and clinical epidemiology of CXCR4-using HIV-1 in a large population of antiretroviral naïve individuals. J Infect Dis. 2005;192:466-474.
    • (2005) J Infect Dis , vol.192 , pp. 466-474
    • Brumme, Z.1    Goodrich, J.2    Mayer, H.3
  • 5
    • 14844333093 scopus 로고    scopus 로고
    • Epidemiology and predictive factors for chemokine receptor use in HIV-1 infection
    • Moyle G, Wildfire A, Mandalia S, et al. Epidemiology and predictive factors for chemokine receptor use in HIV-1 infection. J Infect Dis. 2005; 91:866-872.
    • (2005) J Infect Dis , vol.91 , pp. 866-872
    • Moyle, G.1    Wildfire, A.2    Mandalia, S.3
  • 6
    • 33745440781 scopus 로고    scopus 로고
    • HIV tropism: Diagnostic tools and implications for disease progression and treatment with entry inhibitors
    • Poveda E, Briz V, Quiñónes-Mateu M, et al. HIV tropism: diagnostic tools and implications for disease progression and treatment with entry inhibitors. AIDS. 2006;20:1359-1367.
    • (2006) AIDS , vol.20 , pp. 1359-1367
    • Poveda, E.1    Briz, V.2    Quiñónes-Mateu, M.3
  • 7
    • 35748933494 scopus 로고    scopus 로고
    • Update of the drug resistance mutations in HIV-1: 2007
    • Johnson V, Brun-Vezinet F, Clotet B, et al. Update of the drug resistance mutations in HIV-1: 2007. Top HIV Med. 2007;15:119-125.
    • (2007) Top HIV Med , vol.15 , pp. 119-125
    • Johnson, V.1    Brun-Vezinet, F.2    Clotet, B.3
  • 8
    • 34249992110 scopus 로고    scopus 로고
    • Prevalence of X4 tropic viruses in patients recently infected with HIV-1 and lack of association with transmission of drug resistance
    • de Mendoza C, Rodriguez C, Garcia F, et al. Prevalence of X4 tropic viruses in patients recently infected with HIV-1 and lack of association with transmission of drug resistance. J Antimicrob Chemother. 2007;59: 698-704.
    • (2007) J Antimicrob Chemother , vol.59 , pp. 698-704
    • de Mendoza, C.1    Rodriguez, C.2    Garcia, F.3
  • 9
    • 27444439834 scopus 로고    scopus 로고
    • Resistance to nonnucleoside reverse transcriptase inhibitors and prevalence of HIV type 1 non-B subtypes are increasing among persons with recent infection in Spain
    • de Mendoza C, Rodriguez C, Colomina J, et al. Resistance to nonnucleoside reverse transcriptase inhibitors and prevalence of HIV type 1 non-B subtypes are increasing among persons with recent infection in Spain. Clin Infect Dis. 2005;41:1350-1354.
    • (2005) Clin Infect Dis , vol.41 , pp. 1350-1354
    • de Mendoza, C.1    Rodriguez, C.2    Colomina, J.3
  • 10
    • 35548947372 scopus 로고    scopus 로고
    • HIV-1 coreceptor usage determination in clinical isolates using clonal and population-based genotypic and phenotypic assays
    • Van Baelen K, Vandenbroucke I, Rondelez E, et al. HIV-1 coreceptor usage determination in clinical isolates using clonal and population-based genotypic and phenotypic assays. J Virol Methods. 2007;146:61-73.
    • (2007) J Virol Methods , vol.146 , pp. 61-73
    • Van Baelen, K.1    Vandenbroucke, I.2    Rondelez, E.3
  • 11
    • 34347361504 scopus 로고    scopus 로고
    • Prevalence of X4 tropic HIV-1 variants in patients with differences in disease stage and exposure to antiretroviral therapy
    • Poveda E, Briz V, de Mendoza C, et al. Prevalence of X4 tropic HIV-1 variants in patients with differences in disease stage and exposure to antiretroviral therapy. J Med Virol. 2007;79:1040-1046.
    • (2007) J Med Virol , vol.79 , pp. 1040-1046
    • Poveda, E.1    Briz, V.2    de Mendoza, C.3
  • 13
    • 10744231634 scopus 로고    scopus 로고
    • Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of HIV type 1 env V3 loop sequences
    • Jensen M, Li F, van't Wout A, et al. Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of HIV type 1 env V3 loop sequences. J Virol. 2003;77:13376-13388.
    • (2003) J Virol , vol.77 , pp. 13376-13388
    • Jensen, M.1    Li, F.2    van't Wout, A.3
  • 14
    • 33646444564 scopus 로고    scopus 로고
    • A reliable phenotype predictor for HIV type 1 subtype C based on envelope V3 sequences
    • Jensen M, Coetzer M, van't Wout A, et al. A reliable phenotype predictor for HIV type 1 subtype C based on envelope V3 sequences. J Virol. 2006; 80:4698-4704.
    • (2006) J Virol , vol.80 , pp. 4698-4704
    • Jensen, M.1    Coetzer, M.2    van't Wout, A.3
  • 15
    • 27544439231 scopus 로고    scopus 로고
    • Learning mixtures of localized rules by maximizing the area under the ROC curve
    • Hernández-Orallo J, Lachiche N, Flach P, eds, London, UK: Premiere Inc
    • Sing T, Beerenwinkel N, Lengauer T. Learning mixtures of localized rules by maximizing the area under the ROC curve. In: Hernández-Orallo J, Lachiche N, Flach P, eds. ROCAI- 2004 International Workshop on ROC Analysis in Artificial Intelligence. London, UK: Premiere Inc. 2004;89-96.
    • (2004) ROCAI- 2004 International Workshop on ROC Analysis in Artificial Intelligence , pp. 89-96
    • Sing, T.1    Beerenwinkel, N.2    Lengauer, T.3
  • 16
    • 0033012398 scopus 로고    scopus 로고
    • Chemokine receptors as HIV-1 coreceptors: Role in viral entry, tropism, and disease
    • Berger E, Murphy P, Farber J. Chemokine receptors as HIV-1 coreceptors: role in viral entry, tropism, and disease. Annu Rev Immunol. 1999;17:657-700.
    • (1999) Annu Rev Immunol , vol.17 , pp. 657-700
    • Berger, E.1    Murphy, P.2    Farber, J.3
  • 17
    • 28444442287 scopus 로고    scopus 로고
    • The role of Langerhans cells in the sexual transmission of HIV
    • Kawamura T, Kurtz S, Blauvelt A. The role of Langerhans cells in the sexual transmission of HIV. J Dermatol Sci. 2005;40:147-155.
    • (2005) J Dermatol Sci , vol.40 , pp. 147-155
    • Kawamura, T.1    Kurtz, S.2    Blauvelt, A.3
  • 18
    • 0036169548 scopus 로고    scopus 로고
    • Mucosal gatekeepers: Selecting HIV viruses for early infection
    • Bomsel M, David V. Mucosal gatekeepers: selecting HIV viruses for early infection. Nat Med. 2002;8:114-116.
    • (2002) Nat Med , vol.8 , pp. 114-116
    • Bomsel, M.1    David, V.2
  • 19
    • 34548261959 scopus 로고    scopus 로고
    • Current V3 genotypic algorithms are inadequate for predicting X4 co-receptor usage in clinical isolates
    • Low A, Dong W, Chan D, et al. Current V3 genotypic algorithms are inadequate for predicting X4 co-receptor usage in clinical isolates. AIDS. 2007;21:F17-F24.
    • (2007) AIDS , vol.21
    • Low, A.1    Dong, W.2    Chan, D.3
  • 20
    • 33846932573 scopus 로고    scopus 로고
    • HIV-1 chemokine coreceptor use among antiretroviral-experienced patients screened for a clinical trial of CCR5 inhibitor: AIDS Clinical Trial Group A5211
    • Wilkin T, Su Z, Kuritzkes D, et al. HIV-1 chemokine coreceptor use among antiretroviral-experienced patients screened for a clinical trial of CCR5 inhibitor: AIDS Clinical Trial Group A5211. Clin Infect Dis. 2007; 44:591-595.
    • (2007) Clin Infect Dis , vol.44 , pp. 591-595
    • Wilkin, T.1    Su, Z.2    Kuritzkes, D.3
  • 21
    • 33746160257 scopus 로고    scopus 로고
    • HIV-1 coreceptor use in triple-class treatment-experienced patients: Baseline prevalence, correlates, and relationship to enfuvirtide response
    • Melby T, Despirito M, Demasi R, et al. HIV-1 coreceptor use in triple-class treatment-experienced patients: baseline prevalence, correlates, and relationship to enfuvirtide response. J Infect Dis. 2006;194:238-246.
    • (2006) J Infect Dis , vol.194 , pp. 238-246
    • Melby, T.1    Despirito, M.2    Demasi, R.3
  • 22
    • 0038637409 scopus 로고    scopus 로고
    • Predicting HIV-1 coreceptor usage with sequence analysis
    • Jensen M, van't Wout A. Predicting HIV-1 coreceptor usage with sequence analysis. AIDS Rev. 2003;5:104-112.
    • (2003) AIDS Rev , vol.5 , pp. 104-112
    • Jensen, M.1    van't Wout, A.2
  • 23
    • 1642423935 scopus 로고    scopus 로고
    • HIV biological variability unveiled: Frequent isolations and chimeric receptors reveal unprecedented variation of coreceptor use
    • Karlsson I, Antonsson L, Shi Y, et al. HIV biological variability unveiled: frequent isolations and chimeric receptors reveal unprecedented variation of coreceptor use. AIDS. 2003;17:2561-2569.
    • (2003) AIDS , vol.17 , pp. 2561-2569
    • Karlsson, I.1    Antonsson, L.2    Shi, Y.3
  • 25
    • 33846623260 scopus 로고    scopus 로고
    • Development and characterization of a novel single-cycle recombinant-virus assay to determine HIV-1 coreceptor tropism
    • Whitcomb J, Huang W, Fransen S, et al. Development and characterization of a novel single-cycle recombinant-virus assay to determine HIV-1 coreceptor tropism. Antimicrob Agents Chemother. 2007;51:566-575.
    • (2007) Antimicrob Agents Chemother , vol.51 , pp. 566-575
    • Whitcomb, J.1    Huang, W.2    Fransen, S.3
  • 26
    • 34848915403 scopus 로고    scopus 로고
    • The role of the N-terminal segment of CCR5 in HIV-1 Env-mediated membrane fusion and the mechanism of virus adaptation to CCR5 lacking this segment
    • Melikyan G, Platt E, Kabat D. The role of the N-terminal segment of CCR5 in HIV-1 Env-mediated membrane fusion and the mechanism of virus adaptation to CCR5 lacking this segment. Retrovirology. 2007;4:55-62.
    • (2007) Retrovirology , vol.4 , pp. 55-62
    • Melikyan, G.1    Platt, E.2    Kabat, D.3
  • 27
    • 16244379228 scopus 로고    scopus 로고
    • Role of low CD4 levels in the influence of HIV type 1 envelope V1 and V2 regions on entry and spread in macrophages
    • Walter BL, Wehrly K, Swanstrom R, et al. Role of low CD4 levels in the influence of HIV type 1 envelope V1 and V2 regions on entry and spread in macrophages. J Virol. 2005;79:4828-4837.
    • (2005) J Virol , vol.79 , pp. 4828-4837
    • Walter, B.L.1    Wehrly, K.2    Swanstrom, R.3
  • 28
    • 33847053906 scopus 로고    scopus 로고
    • Determining HIV coreceptor use in a clinical setting: Degree of correlation between two phenotypic assays and a bioinformatic model
    • Skrabal K, Low A, Dong W, et al. Determining HIV coreceptor use in a clinical setting: degree of correlation between two phenotypic assays and a bioinformatic model. J Clin Microbiol. 2007;45:279-284.
    • (2007) J Clin Microbiol , vol.45 , pp. 279-284
    • Skrabal, K.1    Low, A.2    Dong, W.3
  • 29
    • 33847272713 scopus 로고    scopus 로고
    • Mutations in the V3 stem versus the V3 crown and C4 region have different effects on the binding and fusion steps of HIV type 1 gp120 interaction with the CCR5 coreceptor
    • Suphaphiphat P, Essex M, Lee TH. Mutations in the V3 stem versus the V3 crown and C4 region have different effects on the binding and fusion steps of HIV type 1 gp120 interaction with the CCR5 coreceptor. Virology. 2007;360:182-190.
    • (2007) Virology , vol.360 , pp. 182-190
    • Suphaphiphat, P.1    Essex, M.2    Lee, T.H.3


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