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Volumn 146, Issue 1-2, 2007, Pages 61-73

HIV-1 coreceptor usage determination in clinical isolates using clonal and population-based genotypic and phenotypic assays

Author keywords

Coreceptor; Envelope; Human immunodeficiency virus; Tropism

Indexed keywords

CHEMOKINE RECEPTOR CCR5; CHEMOKINE RECEPTOR CXCR4; ENHANCED GREEN FLUORESCENT PROTEIN; VIRUS ENVELOPE PROTEIN; VIRUS GLYCOPROTEIN;

EID: 35548947372     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2007.06.003     Document Type: Article
Times cited : (31)

References (46)
  • 3
    • 0033012398 scopus 로고    scopus 로고
    • Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease
    • Berger E.A., Murphy P.M., and Farber J.M. Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease. Annu. Rev. Immunol. 17 (1999) 657-700
    • (1999) Annu. Rev. Immunol. , vol.17 , pp. 657-700
    • Berger, E.A.1    Murphy, P.M.2    Farber, J.M.3
  • 4
    • 0027154014 scopus 로고
    • A single amino acid substitution in the V1 loop of human immunodeficiency virus type 1 gp120 alters cellular tropism
    • Boyd M.T., Simpson G.R., Cann A.J., Johnson M.A., and Weiss R.A. A single amino acid substitution in the V1 loop of human immunodeficiency virus type 1 gp120 alters cellular tropism. J. Virol. 67 (1993) 3649-3652
    • (1993) J. Virol. , vol.67 , pp. 3649-3652
    • Boyd, M.T.1    Simpson, G.R.2    Cann, A.J.3    Johnson, M.A.4    Weiss, R.A.5
  • 5
    • 0027488802 scopus 로고
    • A cross-sectional comparison of persons with syncytium- and non-syncytium-inducing human immunodeficiency virus
    • Bozzette S.A., McCutchan J.A., Spector S.A., Wright B., and Richman D.D. A cross-sectional comparison of persons with syncytium- and non-syncytium-inducing human immunodeficiency virus. J. Infect. Dis. 168 (1993) 1374-1379
    • (1993) J. Infect. Dis. , vol.168 , pp. 1374-1379
    • Bozzette, S.A.1    McCutchan, J.A.2    Spector, S.A.3    Wright, B.4    Richman, D.D.5
  • 8
    • 0030053670 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 tropism for T-lymphoid cell lines: role of the V3 loop and C4 envelope determinants
    • Carrillo A., and Ratner L. Human immunodeficiency virus type 1 tropism for T-lymphoid cell lines: role of the V3 loop and C4 envelope determinants. J. Virol. 70 (1996) 1301-1309
    • (1996) J. Virol. , vol.70 , pp. 1301-1309
    • Carrillo, A.1    Ratner, L.2
  • 9
    • 0030610544 scopus 로고    scopus 로고
    • The kappaB sites in the human immunodeficiency virus type 1 long terminal repeat enhance virus replication yet are not absolutely required for viral growth
    • Chen B.K., Feinberg M.B., and Baltimore D. The kappaB sites in the human immunodeficiency virus type 1 long terminal repeat enhance virus replication yet are not absolutely required for viral growth. J. Virol. 71 (1997) 5495-5504
    • (1997) J. Virol. , vol.71 , pp. 5495-5504
    • Chen, B.K.1    Feinberg, M.B.2    Baltimore, D.3
  • 10
    • 33644609596 scopus 로고    scopus 로고
    • CCR5 use by human immunodeficiency virus type 1 is associated closely with the gp120 V3 loop N-linked glycosylation site
    • Clevestig P., Pramanik L., Leitner T., and Ehrnst A. CCR5 use by human immunodeficiency virus type 1 is associated closely with the gp120 V3 loop N-linked glycosylation site. J. Gen. Virol. 87 (2006) 607-612
    • (2006) J. Gen. Virol. , vol.87 , pp. 607-612
    • Clevestig, P.1    Pramanik, L.2    Leitner, T.3    Ehrnst, A.4
  • 12
    • 0031575431 scopus 로고    scopus 로고
    • Change in coreceptor use coreceptor use correlates with disease progression in HIV-1-infected individuals
    • Connor R.I., Sheridan K.E., Ceradini D., Choe S., and Landau N.R. Change in coreceptor use coreceptor use correlates with disease progression in HIV-1-infected individuals. J. Exp. Med. 185 (1997) 621-628
    • (1997) J. Exp. Med. , vol.185 , pp. 621-628
    • Connor, R.I.1    Sheridan, K.E.2    Ceradini, D.3    Choe, S.4    Landau, N.R.5
  • 13
    • 33745581733 scopus 로고    scopus 로고
    • GlaxoSmithKline ends aplaviroc trials
    • Crabb C. GlaxoSmithKline ends aplaviroc trials. Aids 20 (2006) 641
    • (2006) Aids , vol.20 , pp. 641
    • Crabb, C.1
  • 18
    • 0030002637 scopus 로고    scopus 로고
    • HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor
    • Feng Y., Broder C.C., Kennedy P.E., and Berger E.A. HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor. Science 272 (1996) 872-877
    • (1996) Science , vol.272 , pp. 872-877
    • Feng, Y.1    Broder, C.C.2    Kennedy, P.E.3    Berger, E.A.4
  • 19
    • 0026606727 scopus 로고
    • Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule
    • Fouchier R.A., Groenink M., Kootstra N.A., Tersmette M., Huisman H.G., Miedema F., and Schuitemaker H. Phenotype-associated sequence variation in the third variable domain of the human immunodeficiency virus type 1 gp120 molecule. J. Virol. 66 (1992) 3183-3187
    • (1992) J. Virol. , vol.66 , pp. 3183-3187
    • Fouchier, R.A.1    Groenink, M.2    Kootstra, N.A.3    Tersmette, M.4    Huisman, H.G.5    Miedema, F.6    Schuitemaker, H.7
  • 21
    • 0034755058 scopus 로고    scopus 로고
    • Length variation of glycoprotein 120 V2 region in relation to biological phenotypes and coreceptor usage of primary HIV type 1 isolates
    • Jansson M., Backstrom E., Scarlatti G., Bjorndal A., Matsuda S., Rossi P., Albert J., and Wigzell H. Length variation of glycoprotein 120 V2 region in relation to biological phenotypes and coreceptor usage of primary HIV type 1 isolates. AIDS Res. Hum. Retroviruses 17 (2001) 1405-1414
    • (2001) AIDS Res. Hum. Retroviruses , vol.17 , pp. 1405-1414
    • Jansson, M.1    Backstrom, E.2    Scarlatti, G.3    Bjorndal, A.4    Matsuda, S.5    Rossi, P.6    Albert, J.7    Wigzell, H.8
  • 22
    • 0038637409 scopus 로고    scopus 로고
    • Predicting HIV-1 coreceptor usage with sequence analysis
    • Jensen M.A., and van 't Wout A.B. Predicting HIV-1 coreceptor usage with sequence analysis. AIDS Rev. 5 (2003) 104-112
    • (2003) AIDS Rev. , vol.5 , pp. 104-112
    • Jensen, M.A.1    van 't Wout, A.B.2
  • 24
    • 35649008181 scopus 로고    scopus 로고
    • Mayer, H., van der Ryst, E., Saag, M., Clotet, B., Fatkenheuer, G., Clumeck, N., Turner, K., Goodrich, J.M., 2006. Safety and efficacy of maraviroc, a novel CCR5 antagonist, when used in combination with optimized background therapy for the treatment of antiretroviral-experienced subjects infected with Dual/Mixed-tropic HIV-1: 24-week results of a phase 2b exploratory trial.
  • 25
    • 0742325043 scopus 로고    scopus 로고
    • The CCR5 and CXCR4 coreceptors-central to understanding the transmission and pathogenesis of human immunodeficiency virus type 1 infection
    • Moore J.P., Kitchen S.G., Pugach P., and Zack J.A. The CCR5 and CXCR4 coreceptors-central to understanding the transmission and pathogenesis of human immunodeficiency virus type 1 infection. AIDS Res. Hum. Retroviruses 20 (2004) 111-126
    • (2004) AIDS Res. Hum. Retroviruses , vol.20 , pp. 111-126
    • Moore, J.P.1    Kitchen, S.G.2    Pugach, P.3    Zack, J.A.4
  • 26
    • 0034974149 scopus 로고    scopus 로고
    • N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dualtropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism
    • Ogert R.A., Lee M.K., Ross W., Buckler-White A., Martin M.A., and Cho M.W. N-linked glycosylation sites adjacent to and within the V1/V2 and the V3 loops of dualtropic human immunodeficiency virus type 1 isolate DH12 gp120 affect coreceptor usage and cellular tropism. J. Virol. 75 (2001) 5998-6006
    • (2001) J. Virol. , vol.75 , pp. 5998-6006
    • Ogert, R.A.1    Lee, M.K.2    Ross, W.3    Buckler-White, A.4    Martin, M.A.5    Cho, M.W.6
  • 28
    • 0035918220 scopus 로고    scopus 로고
    • N-linked glycosylation of the HIV type-1 gp120 envelope glycoprotein as a major determinant of CCR5 and CXCR4 coreceptor utilization
    • Pollakis G., Kang S., Kliphuis A., Chalaby M.I., Goudsmit J., and Paxton W.A. N-linked glycosylation of the HIV type-1 gp120 envelope glycoprotein as a major determinant of CCR5 and CXCR4 coreceptor utilization. J. Biol. Chem. 276 (2001) 13433-13441
    • (2001) J. Biol. Chem. , vol.276 , pp. 13433-13441
    • Pollakis, G.1    Kang, S.2    Kliphuis, A.3    Chalaby, M.I.4    Goudsmit, J.5    Paxton, W.A.6
  • 29
    • 0035098352 scopus 로고    scopus 로고
    • Loss of N-linked glycans in the V3-loop region of gp120 is correlated to an enhanced infectivity of HIV-1
    • Polzer S., Dittmar M.T., Schmitz H., Meyer B., Muller H., Krausslich H.G., and Schreiber M. Loss of N-linked glycans in the V3-loop region of gp120 is correlated to an enhanced infectivity of HIV-1. Glycobiology 11 (2001) 11-19
    • (2001) Glycobiology , vol.11 , pp. 11-19
    • Polzer, S.1    Dittmar, M.T.2    Schmitz, H.3    Meyer, B.4    Muller, H.5    Krausslich, H.G.6    Schreiber, M.7
  • 30
    • 0036935266 scopus 로고    scopus 로고
    • The N-linked glycan g15 within the V3 loop of the HIV-1 external glycoprotein gp120 affects coreceptor usage, cellular tropism, and neutralization
    • Polzer S., Dittmar M.T., Schmitz H., and Schreiber M. The N-linked glycan g15 within the V3 loop of the HIV-1 external glycoprotein gp120 affects coreceptor usage, cellular tropism, and neutralization. Virology 304 (2002) 70-80
    • (2002) Virology , vol.304 , pp. 70-80
    • Polzer, S.1    Dittmar, M.T.2    Schmitz, H.3    Schreiber, M.4
  • 31
    • 0035884899 scopus 로고    scopus 로고
    • Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks
    • Resch W., Hoffman N., and Swanstrom R. Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks. Virology 288 (2001) 51-62
    • (2001) Virology , vol.288 , pp. 51-62
    • Resch, W.1    Hoffman, N.2    Swanstrom, R.3
  • 32
    • 0034690683 scopus 로고    scopus 로고
    • Fine definition of a conserved CCR5-binding region on the human immunodeficiency virus type 1 glycoprotein 120
    • Rizzuto C., and Sodroski J. Fine definition of a conserved CCR5-binding region on the human immunodeficiency virus type 1 glycoprotein 120. AIDS Res. Hum. Retroviruses 16 (2000) 741-749
    • (2000) AIDS Res. Hum. Retroviruses , vol.16 , pp. 741-749
    • Rizzuto, C.1    Sodroski, J.2
  • 37
    • 0026600926 scopus 로고
    • Biological phenotype of human immunodeficiency virus type 1 clones at 35 different stages of infection: progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus population
    • Schuitemaker H., Koot M., Kootstra N.A., Dercksen M.W., de Goede R.E., van Steenwijk R.P., Lange J.M., Schattenkerk J.K., Miedema F., and Tersmette M. Biological phenotype of human immunodeficiency virus type 1 clones at 35 different stages of infection: progression of disease is associated with a shift from monocytotropic to T-cell-tropic virus population. J. Virol. 66 (1992) 1354-1360
    • (1992) J. Virol. , vol.66 , pp. 1354-1360
    • Schuitemaker, H.1    Koot, M.2    Kootstra, N.A.3    Dercksen, M.W.4    de Goede, R.E.5    van Steenwijk, R.P.6    Lange, J.M.7    Schattenkerk, J.K.8    Miedema, F.9    Tersmette, M.10
  • 38
    • 3042595910 scopus 로고    scopus 로고
    • Small-molecule antagonists of CCR5 and CXCR4: a promising new class of anti-HIV-1 drugs
    • Seibert C., and Sakmar T.P. Small-molecule antagonists of CCR5 and CXCR4: a promising new class of anti-HIV-1 drugs. Curr. Pharm. Des. 10 (2004) 2041-2062
    • (2004) Curr. Pharm. Des. , vol.10 , pp. 2041-2062
    • Seibert, C.1    Sakmar, T.P.2
  • 40
    • 35648950298 scopus 로고    scopus 로고
    • Sing, T., Harrigan, R., Beerenwinkel, N., Daumer, M., Kaiser, R., Low, A., Cheung, P.K., Lengauer, T., 2006. Immunologic markers improve genotypic prediction of HIV-1 coreceptor usage.
  • 41
    • 0031978550 scopus 로고    scopus 로고
    • Determinants of entry cofactor utilization and tropism in a dualtropic human immunodeficiency virus type 1 primary isolate
    • Smyth R.J., Yi Y., Singh A., and Collman R.G. Determinants of entry cofactor utilization and tropism in a dualtropic human immunodeficiency virus type 1 primary isolate. J. Virol. 72 (1998) 4478-4484
    • (1998) J. Virol. , vol.72 , pp. 4478-4484
    • Smyth, R.J.1    Yi, Y.2    Singh, A.3    Collman, R.G.4
  • 43
    • 0023896246 scopus 로고
    • Differential syncytium-inducing capacity of human immunodeficiency virus isolates: frequent detection of syncytiuminducing isolates in patients with acquired immunodeficiency syndrome (AIDS) and AIDS-related complex
    • Tersmette M., de Goede R.E., Al B.J., Winkel I.N., Gruters R.A., Cuypers H.T., Huisman H.G., and Miedema F. Differential syncytium-inducing capacity of human immunodeficiency virus isolates: frequent detection of syncytiuminducing isolates in patients with acquired immunodeficiency syndrome (AIDS) and AIDS-related complex. J. Virol. 62 (1988) 2026-2032
    • (1988) J. Virol. , vol.62 , pp. 2026-2032
    • Tersmette, M.1    de Goede, R.E.2    Al, B.J.3    Winkel, I.N.4    Gruters, R.A.5    Cuypers, H.T.6    Huisman, H.G.7    Miedema, F.8
  • 44
    • 0024536114 scopus 로고
    • Evidence for a role of virulent human immunodeficiency virus (HIV) variants in the pathogenesis of acquired immunodeficiency syndrome: studies on sequential HIV isolates
    • Tersmette M., Gruters R.A., de Wolf F., de Goede R.E., Lange J.M., Schellekens P.T., Goudsmit J., Huisman H.G., and Miedema F. Evidence for a role of virulent human immunodeficiency virus (HIV) variants in the pathogenesis of acquired immunodeficiency syndrome: studies on sequential HIV isolates. J. Virol. 63 (1989) 2118-2125
    • (1989) J. Virol. , vol.63 , pp. 2118-2125
    • Tersmette, M.1    Gruters, R.A.2    de Wolf, F.3    de Goede, R.E.4    Lange, J.M.5    Schellekens, P.T.6    Goudsmit, J.7    Huisman, H.G.8    Miedema, F.9
  • 45
    • 0034749279 scopus 로고    scopus 로고
    • Determination of coreceptor usage of human immunodeficiency virus type 1 from patient plasma samples by using a recombinant phenotypic assay
    • Trouplin V., Salvatori F., Cappello F., Obry V., Brelot A., Heveker N., Alizon M., Scarlatti G., Clavel F., and Mammano F. Determination of coreceptor usage of human immunodeficiency virus type 1 from patient plasma samples by using a recombinant phenotypic assay. J. Virol. 75 (2001) 251-259
    • (2001) J. Virol. , vol.75 , pp. 251-259
    • Trouplin, V.1    Salvatori, F.2    Cappello, F.3    Obry, V.4    Brelot, A.5    Heveker, N.6    Alizon, M.7    Scarlatti, G.8    Clavel, F.9    Mammano, F.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.