-
1
-
-
30744470374
-
The Nudix hydrolase superfamily
-
McLennan, A. G. (2006) The Nudix hydrolase superfamily. Cell. Mol. Life Sci. 63, 123-143.
-
(2006)
Cell. Mol. Life Sci
, vol.63
, pp. 123-143
-
-
McLennan, A.G.1
-
2
-
-
0028972054
-
Solution structure of the MutT enzyme, a nucleoside triphosphate pyrophosphohydrolase
-
Abeygunawardana, C., Weber, D. J., Gittis, A. G., Frick, D. N., Lin, J., Miller, A. F., Bessman, M. J., and Mildvan, A. S. (1995) Solution structure of the MutT enzyme, a nucleoside triphosphate pyrophosphohydrolase. Biochemistry 34, 14997-15005.
-
(1995)
Biochemistry
, vol.34
, pp. 14997-15005
-
-
Abeygunawardana, C.1
Weber, D.J.2
Gittis, A.G.3
Frick, D.N.4
Lin, J.5
Miller, A.F.6
Bessman, M.J.7
Mildvan, A.S.8
-
3
-
-
0029835350
-
The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes
-
Bessman, M. J., Frick, N., and O'Handley, S. F. (1996) The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "housecleaning" enzymes. J. Biol. Chem. 271, 25059-25062.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 25059-25062
-
-
Bessman, M.J.1
Frick, N.2
O'Handley, S.F.3
-
4
-
-
0036792078
-
The hDcp2 protein is a mammalian mRNA decapping enzyme
-
Wang, Z., Jiao, X., Carr-Schmid, A., and Kiledjian, M. (2002) The hDcp2 protein is a mammalian mRNA decapping enzyme. Proc. Natl. Acad. Sxi. U.S.A. 99, 12663-12668.
-
(2002)
Proc. Natl. Acad. Sxi. U.S.A
, vol.99
, pp. 12663-12668
-
-
Wang, Z.1
Jiao, X.2
Carr-Schmid, A.3
Kiledjian, M.4
-
5
-
-
0033527537
-
Studies on the ADP-ribose pyrophosphatase subfamily of the nudix hydrolases and tentative identification of trgB, a gene associated with tellurite resistance
-
Dunn, C. A., O'Handley, S. F., Frick, D. N., and Bessman, M. J. (1999) Studies on the ADP-ribose pyrophosphatase subfamily of the nudix hydrolases and tentative identification of trgB, a gene associated with tellurite resistance. J. Biol. Chem. 274, 32318-32324.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 32318-32324
-
-
Dunn, C.A.1
O'Handley, S.F.2
Frick, D.N.3
Bessman, M.J.4
-
6
-
-
6344235639
-
A genetic screen for the identification of thiamin metabolic genes
-
Lawhorn, B. G., Gerdes, S. Y., and Begley, T. P. (2004) A genetic screen for the identification of thiamin metabolic genes. J. Biol. Chem. 279, 43555-43559.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 43555-43559
-
-
Lawhorn, B.G.1
Gerdes, S.Y.2
Begley, T.P.3
-
7
-
-
0032538976
-
A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase
-
Safrany, S. T., Caffrey, J. J., Yang, X. N., Bembenek, M. E., Moyer, M. B., Burkhart, W. A., and Shears, S. B. (1998) A novel context for the 'MutT' module, a guardian of cell integrity, in a diphosphoinositol polyphosphate phosphohydrolase. EMBO J. 17, 6599-6607.
-
(1998)
EMBO J
, vol.17
, pp. 6599-6607
-
-
Safrany, S.T.1
Caffrey, J.J.2
Yang, X.N.3
Bembenek, M.E.4
Moyer, M.B.5
Burkhart, W.A.6
Shears, S.B.7
-
8
-
-
10044266564
-
Gene ytkD of Bacillus subtilis encodes an atypical nucleoside triphosphate member of the Nudix hydrolase superfamily
-
Xu, W., Jones, C. R., Dunn, C. A., and Bessman, M. J. (2004) Gene ytkD of Bacillus subtilis encodes an atypical nucleoside triphosphate member of the Nudix hydrolase superfamily. J. Bacteriol. 186, 8380-8384.
-
(2004)
J. Bacteriol
, vol.186
, pp. 8380-8384
-
-
Xu, W.1
Jones, C.R.2
Dunn, C.A.3
Bessman, M.J.4
-
9
-
-
33645049083
-
House cleaning, a part of good housekeeping
-
Galperin, M. Y., Moroz, O. V., Wilson, K. S., and Murzin, A. G. (2006) House cleaning, a part of good housekeeping. Mol. Microbiol. 59, 5-19.
-
(2006)
Mol. Microbiol
, vol.59
, pp. 5-19
-
-
Galperin, M.Y.1
Moroz, O.V.2
Wilson, K.S.3
Murzin, A.G.4
-
10
-
-
0027324378
-
Mutagenesis by 8-oxoguanine: An enemy within
-
Grollman, A. P., and Moriya, M. (1993) Mutagenesis by 8-oxoguanine: An enemy within. Trends Genet. 9, 246-249.
-
(1993)
Trends Genet
, vol.9
, pp. 246-249
-
-
Grollman, A.P.1
Moriya, M.2
-
11
-
-
0026513966
-
MutT protein specifically hydrolyzes a potent mutagenic substrate for DNA synthesis
-
Maki, H., and Sekiguchi, M. (1992) MutT protein specifically hydrolyzes a potent mutagenic substrate for DNA synthesis. Nature 355, 273-275.
-
(1992)
Nature
, vol.355
, pp. 273-275
-
-
Maki, H.1
Sekiguchi, M.2
-
12
-
-
0026806957
-
NMR and isotopic exchange studies of the site of bond cleavage in the MutT reaction
-
Weber, D. J., Bhatnagar, S. K., Bullions, L. C., Bessman, M. J., and Mildvan, A. S. (1992) NMR and isotopic exchange studies of the site of bond cleavage in the MutT reaction. J. Biol. Chem. 267, 16939-16942.
-
(1992)
J. Biol. Chem
, vol.267
, pp. 16939-16942
-
-
Weber, D.J.1
Bhatnagar, S.K.2
Bullions, L.C.3
Bessman, M.J.4
Mildvan, A.S.5
-
14
-
-
0036217818
-
The crystal structure of diadenosine tetraphosphate hydrolase from Caenorhabditis elegans in free and binary complex forms
-
Bailey, S., Sedelnikova, S. E., Blackburn, G. M., Abdelghany, H. M., Baker, P. J., McLennan, A. G., and Rafferty, J. B. (2002) The crystal structure of diadenosine tetraphosphate hydrolase from Caenorhabditis elegans in free and binary complex forms. Structure 10, 589-600.
-
(2002)
Structure
, vol.10
, pp. 589-600
-
-
Bailey, S.1
Sedelnikova, S.E.2
Blackburn, G.M.3
Abdelghany, H.M.4
Baker, P.J.5
McLennan, A.G.6
Rafferty, J.B.7
-
15
-
-
0036174723
-
The structure of Ap(4)A hydrolase complexed with ATP-MgF(x) reveals the basis of substrate binding
-
Fletcher, J. I., Swarbrick, J. D., Maksel, D., Gayler, K. R., and Gooley, P. R. (2002) The structure of Ap(4)A hydrolase complexed with ATP-MgF(x) reveals the basis of substrate binding. Structure 10, 205-213.
-
(2002)
Structure
, vol.10
, pp. 205-213
-
-
Fletcher, J.I.1
Swarbrick, J.D.2
Maksel, D.3
Gayler, K.R.4
Gooley, P.R.5
-
16
-
-
0035026968
-
The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family
-
Gabelli, S. B., Bianchet, M. A., Bessman, M. J., and Amzel, L. M. (2001) The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family. Nat. Struct. Biol. 8, 467-472.
-
(2001)
Nat. Struct. Biol
, vol.8
, pp. 467-472
-
-
Gabelli, S.B.1
Bianchet, M.A.2
Bessman, M.J.3
Amzel, L.M.4
-
17
-
-
0043133626
-
Structure and mechanism of MT-ADPRase, a Nudix hydrolase from Mycobacterium tuberculosis
-
Kang, L.-W., Gabelli, S. B., Cunningham, J. E., O'Handley, S. F., and Amzel, L. M. (2003) Structure and mechanism of MT-ADPRase, a Nudix hydrolase from Mycobacterium tuberculosis. Structure 11, 1015-1023.
-
(2003)
Structure
, vol.11
, pp. 1015-1023
-
-
Kang, L.-W.1
Gabelli, S.B.2
Cunningham, J.E.3
O'Handley, S.F.4
Amzel, L.M.5
-
18
-
-
33751077100
-
Crystal structure of human NUDT5 reveals insights into the structural basis of the substrate specificity
-
Zha, M., Zhong, C., Peng, Y., Hu, H., and Ding, J. (2006) Crystal structure of human NUDT5 reveals insights into the structural basis of the substrate specificity. J. Mol. Biol. 364, 1021-1033.
-
(2006)
J. Mol. Biol
, vol.364
, pp. 1021-1033
-
-
Zha, M.1
Zhong, C.2
Peng, Y.3
Hu, H.4
Ding, J.5
-
19
-
-
34547657390
-
Structure and function of the Escherichia coli dihydroneopterin triphosphate pyrophosphatase: A Nudix enzyme involved in folate biosynthesis
-
Gabelli, S. B., Bianchet, M. A., Xu, W., Dunn, C. A., Niu, Z. D., Amzel, L. M., and Bessman, M. J. (2007) Structure and function of the Escherichia coli dihydroneopterin triphosphate pyrophosphatase: A Nudix enzyme involved in folate biosynthesis. Structure 15, 1014-1022.
-
(2007)
Structure
, vol.15
, pp. 1014-1022
-
-
Gabelli, S.B.1
Bianchet, M.A.2
Xu, W.3
Dunn, C.A.4
Niu, Z.D.5
Amzel, L.M.6
Bessman, M.J.7
-
20
-
-
0037816373
-
Structure of a coenzyme A pyrophosphatase from Deinococcus radiodurans: A member of the Nudix family
-
Kang, L.-W., Gabelli, S. B., Bianchet, M. A., Xu, W. L., Bessman, M. J., and Amzel, L. M. (2003) Structure of a coenzyme A pyrophosphatase from Deinococcus radiodurans: A member of the Nudix family. J. Bacteriol. 185, 4110-4118.
-
(2003)
J. Bacteriol
, vol.185
, pp. 4110-4118
-
-
Kang, L.-W.1
Gabelli, S.B.2
Bianchet, M.A.3
Xu, W.L.4
Bessman, M.J.5
Amzel, L.M.6
-
21
-
-
9744224380
-
Structures and mechanisms of Nudix hydrolases
-
Mildvan, A. S., Xia, Z., Azurmendi, H. F., Saraswat, V., Legler, P. M., Massiah, M. A., Gabelli, S. B., Bianchet, M. A., Kang, L.-W., and Amzel, L. M. (2005) Structures and mechanisms of Nudix hydrolases. Arch. Biochem. Biophys. 433, 129-143.
-
(2005)
Arch. Biochem. Biophys
, vol.433
, pp. 129-143
-
-
Mildvan, A.S.1
Xia, Z.2
Azurmendi, H.F.3
Saraswat, V.4
Legler, P.M.5
Massiah, M.A.6
Gabelli, S.B.7
Bianchet, M.A.8
Kang, L.-W.9
Amzel, L.M.10
-
22
-
-
2642528818
-
Characterization of a Nudix hydrolase from Deinococcus radiodurans with a marked specificity for deoxyribonucleoside 5′-diphosphates
-
Fisher, D. J., Cartwright, J. L., Harashima, H., Kamiya, H., and McLennan, A. G. (2004) Characterization of a Nudix hydrolase from Deinococcus radiodurans with a marked specificity for deoxyribonucleoside 5′-diphosphates. BMC Biochem. 5, 7-14.
-
(2004)
BMC Biochem
, vol.5
, pp. 7-14
-
-
Fisher, D.J.1
Cartwright, J.L.2
Harashima, H.3
Kamiya, H.4
McLennan, A.G.5
-
23
-
-
0038449261
-
A novel mechanism for preventing mutations caused by oxidation of guanine nucleotides
-
4
-
Ishibashi, T., Hayakawa, H., and Sekiguchi, M. (2003) A novel mechanism for preventing mutations caused by oxidation of guanine nucleotides. EMBO Rep. 4, 479-483.
-
(2003)
EMBO Rep
, pp. 479-483
-
-
Ishibashi, T.1
Hayakawa, H.2
Sekiguchi, M.3
-
24
-
-
7944226219
-
Dual hydrolysis of diphosphate and triphosphate derivatives of oxidized deoxyadenosine by Orf17 (NtpA), a MutT-type enzyme
-
Hori, M., Fujikawa, K., Kasai, H., Harashima, H., and Kamiya, H. (2005) Dual hydrolysis of diphosphate and triphosphate derivatives of oxidized deoxyadenosine by Orf17 (NtpA), a MutT-type enzyme. DNA Repair 4, 33-39.
-
(2005)
DNA Repair
, vol.4
, pp. 33-39
-
-
Hori, M.1
Fujikawa, K.2
Kasai, H.3
Harashima, H.4
Kamiya, H.5
-
25
-
-
33747335921
-
Three new Nudix hydrolases from Escherichia coli
-
Xu, W., Dunn, C. A., O'Handley, S. F., Smith, D. L., and Bessman, M. J. (2006) Three new Nudix hydrolases from Escherichia coli. J. Biol. Chem. 281, 22794-22798.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 22794-22798
-
-
Xu, W.1
Dunn, C.A.2
O'Handley, S.F.3
Smith, D.L.4
Bessman, M.J.5
-
26
-
-
17844405031
-
Multiple enzyme activities of Escherichia coli MutT protein for sanitization of DNA and RNA precursor pools
-
Ito, R., Hayakawa, H., Sekiguchi, M., and Ishibashi, T. (2005) Multiple enzyme activities of Escherichia coli MutT protein for sanitization of DNA and RNA precursor pools. Biochemistry 44, 6670-6674.
-
(2005)
Biochemistry
, vol.44
, pp. 6670-6674
-
-
Ito, R.1
Hayakawa, H.2
Sekiguchi, M.3
Ishibashi, T.4
-
27
-
-
2642540101
-
Solution structure of hypothetical Nudix hydrolase DR0079 from extremely radiation-resistant Deinococcus radiodurans bacterium
-
Buchko, G. W., Ni, S., Holbrook, S. R., and Kennedy, M. A. (2004) Solution structure of hypothetical Nudix hydrolase DR0079 from extremely radiation-resistant Deinococcus radiodurans bacterium. Proteins 56, 28-39.
-
(2004)
Proteins
, vol.56
, pp. 28-39
-
-
Buchko, G.W.1
Ni, S.2
Holbrook, S.R.3
Kennedy, M.A.4
-
28
-
-
0037325714
-
15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans
-
15N NMR assignments of the hypothetical Nudix protein DR0079 from the extremely radiation-resistant bacterium Deinococcus radiodurans. J. Biomol. NMR 25, 169-170.
-
(2003)
J. Biomol. NMR
, vol.25
, pp. 169-170
-
-
Buchko, G.W.1
Ni, S.2
Holbrook, S.R.3
Kennedy, M.A.4
-
29
-
-
0037039335
-
Mapping protein-protein interactions in solution by NMR spectroscopy
-
Zuiderweg, E. R. P. (2002) Mapping protein-protein interactions in solution by NMR spectroscopy. Biochemistry 41, 1-7.
-
(2002)
Biochemistry
, vol.41
, pp. 1-7
-
-
Zuiderweg, E.R.P.1
-
30
-
-
0033576262
-
15N NMR relaxation studies
-
15N NMR relaxation studies. Biochemistry 38, 15116-15128.
-
(1999)
Biochemistry
, vol.38
, pp. 15116-15128
-
-
Buchko, G.W.1
Daughdrill, G.W.2
de Lorimier, R.3
Rao, B.K.4
Isern, N.G.5
Lingbeck, J.M.6
Taylor, J.S.7
Wold, M.S.8
Gochin, M.9
Spicer, L.D.10
Lowry, D.F.11
Kennedy, M.A.12
-
31
-
-
0037393114
-
Purification, crystallization and preliminary X-ray analysis of two Nudix hydrolases from Deinococcus radiodurans
-
Holbrook, E. L., Schulze-Gahmen, U., Buchko, G. W., Ni, S., Kennedy, M. A., and Holbrook, S. R. (2003) Purification, crystallization and preliminary X-ray analysis of two Nudix hydrolases from Deinococcus radiodurans. Acta Crystallogr. D59, 737-740.
-
(2003)
Acta Crystallogr
, vol.D59
, pp. 737-740
-
-
Holbrook, E.L.1
Schulze-Gahmen, U.2
Buchko, G.W.3
Ni, S.4
Kennedy, M.A.5
Holbrook, S.R.6
-
32
-
-
0031045585
-
Preparation of selenomethionyl proteins for phase determination
-
Doublie, S. (1997) Preparation of selenomethionyl proteins for phase determination. Methods Enzymol. 276, 523-530.
-
(1997)
Methods Enzymol
, vol.276
, pp. 523-530
-
-
Doublie, S.1
-
33
-
-
0023917654
-
A malachite green procedure for orthophosphate determination and its use in alkaline phosphatase-based enzyme immunoassay
-
Baykov, A. A., Evtushenko, O. A., and Avaeva, S. M. (1988) A malachite green procedure for orthophosphate determination and its use in alkaline phosphatase-based enzyme immunoassay. Anal. Biochem. 171, 266-270.
-
(1988)
Anal. Biochem
, vol.171
, pp. 266-270
-
-
Baykov, A.A.1
Evtushenko, O.A.2
Avaeva, S.M.3
-
34
-
-
0035155009
-
The Nudix hydrolases of Deinococcus radiodurans
-
Xu, W., Shen, J., Dunn, C. A., Desai, S., and Bessman, M. J. (2001) The Nudix hydrolases of Deinococcus radiodurans. Mol. Microbiol. 39, 286-290.
-
(2001)
Mol. Microbiol
, vol.39
, pp. 286-290
-
-
Xu, W.1
Shen, J.2
Dunn, C.A.3
Desai, S.4
Bessman, M.J.5
-
35
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z., and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276, 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
36
-
-
0036793095
-
Substructure solution with SHELXD
-
Schneider, T. R., and Sheldrick, G. M. (2002) Substructure solution with SHELXD. Acta Crystallogr. D58, 1772-1779.
-
(2002)
Acta Crystallogr
, vol.D58
, pp. 1772-1779
-
-
Schneider, T.R.1
Sheldrick, G.M.2
-
37
-
-
0013054388
-
Macromolecular phasing with SHELXE
-
Sheldrick, G. M. (2002) Macromolecular phasing with SHELXE. Z. Kristallogr. 217, 644-650.
-
(2002)
Z. Kristallogr
, vol.217
, pp. 644-650
-
-
Sheldrick, G.M.1
-
38
-
-
45749149654
-
-
Sheldrick, G. M. (2003) SHELXC.
-
Sheldrick, G. M. (2003) SHELXC.
-
-
-
-
39
-
-
4644366388
-
HKL2MAP: A graphical user interface for phasing with SHELX programs
-
Pape, T., and Schneider, T. R. (2004) HKL2MAP: A graphical user interface for phasing with SHELX programs. J. Appl. Crystallogr. 37, 843-844.
-
(2004)
J. Appl. Crystallogr
, vol.37
, pp. 843-844
-
-
Pape, T.1
Schneider, T.R.2
-
40
-
-
0033119895
-
Automated MAD and MIR structure solution
-
Terwilliger, T. C., and Berendzen, J. (1999) Automated MAD and MIR structure solution. Acta Crystallogr. D55, 849-861.
-
(1999)
Acta Crystallogr
, vol.D55
, pp. 849-861
-
-
Terwilliger, T.C.1
Berendzen, J.2
-
41
-
-
0035207615
-
Map-likelihood phasing
-
Terwilliger, T. C. (2001) Map-likelihood phasing. Acta Crystallogr. D57, 1763-1775.
-
(2001)
Acta Crystallogr
, vol.D57
, pp. 1763-1775
-
-
Terwilliger, T.C.1
-
42
-
-
0032790081
-
A versatile program for manipulating atomic coordinates and electron density
-
McRee, D. E. (1999) A versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125, 156-165.
-
(1999)
J. Struct. Biol
, vol.125
, pp. 156-165
-
-
McRee, D.E.1
-
43
-
-
3543012707
-
Crystallography and NMR System (CNS): A new software suite for macromolecular structure determination
-
Brünger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. (1998) Crystallography and NMR System (CNS): A new software suite for macromolecular structure determination. Acta Crystallogr. D54, 905-921.
-
(1998)
Acta Crystallogr
, vol.D54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.-S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.14
-
44
-
-
0000243829
-
PROCHECK: A program to check the sterochemical quality of protein structures
-
Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) PROCHECK: A program to check the sterochemical quality of protein structures. J. Appl. Crystallogr. 26, 283-291.
-
(1993)
J. Appl. Crystallogr
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
45
-
-
0037441653
-
Structure validation by C-α geometry: φ, ψ, and C-β deviation
-
Lovell, S. C., Davis, I. W., Arendall, W. B., III, de Bakker, P. I. W., Word, J. M., Prisant, M. G., Richardson, J. S., and Richardson, D. L. (2003) Structure validation by C-α geometry: φ, ψ, and C-β deviation. Proteins 50, 437-450.
-
(2003)
Proteins
, vol.50
, pp. 437-450
-
-
Lovell, S.C.1
Davis, I.W.2
Arendall III, W.B.3
de Bakker, P.I.W.4
Word, J.M.5
Prisant, M.G.6
Richardson, J.S.7
Richardson, D.L.8
-
46
-
-
3242881211
-
SuperPose: A simple server for sophisticated structural superposition
-
Maiti, R., van Domselaar, G. H., Zhang, H., and Wishart, D. S. (2004) SuperPose: A simple server for sophisticated structural superposition. Nucleic Acids Res. 32, W590-W594.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Maiti, R.1
van Domselaar, G.H.2
Zhang, H.3
Wishart, D.S.4
-
47
-
-
0027522193
-
A highly conserved sequence motif defining the family of MutT-related proteins from eubacteria, eukaryotes and viruses
-
Koonin, E. V. (1993) A highly conserved sequence motif defining the family of MutT-related proteins from eubacteria, eukaryotes and viruses. Nucleic Acids Res. 21, 4847.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 4847
-
-
Koonin, E.V.1
-
48
-
-
0036005610
-
Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit β-sheets
-
Wang, S., Mura, C., Sawaya, M. R., Cascio, D., and Eisenberg, D. (2002) Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit β-sheets. Acta Crystallogr. D58, 571-578.
-
(2002)
Acta Crystallogr
, vol.D58
, pp. 571-578
-
-
Wang, S.1
Mura, C.2
Sawaya, M.R.3
Cascio, D.4
Eisenberg, D.5
-
49
-
-
2342644032
-
Structural studies of the Nudix hydrolase DR1025 from Deinococcus radiodurans and its ligand complexes
-
Ranatunga, W., Hill, E. E., Mooster, J. L., Holbrook, E. L., Schulze-Gahmen, U., Xu, W., Bessman, M. J., Brenner, S. E., and Holbrook, S. R. (2004) Structural studies of the Nudix hydrolase DR1025 from Deinococcus radiodurans and its ligand complexes. J. Mol. Biol. 339, 103-116.
-
(2004)
J. Mol. Biol
, vol.339
, pp. 103-116
-
-
Ranatunga, W.1
Hill, E.E.2
Mooster, J.L.3
Holbrook, E.L.4
Schulze-Gahmen, U.5
Xu, W.6
Bessman, M.J.7
Brenner, S.E.8
Holbrook, S.R.9
-
51
-
-
33846505435
-
Crystal structure of the BTB domain from the LRF/ZBTB7 transcriptional regulator
-
Stogios, P. J., Chen, L., and Prive, G. G. (2007) Crystal structure of the BTB domain from the LRF/ZBTB7 transcriptional regulator. Protein Sci. 16, 336-342.
-
(2007)
Protein Sci
, vol.16
, pp. 336-342
-
-
Stogios, P.J.1
Chen, L.2
Prive, G.G.3
-
52
-
-
0037188377
-
Intrinsic disorder and protein function
-
Dunker, A. K., Brown, C. J., Lawsor, J. D., Iahoucheva, L. M., and Obradovic, Z. (2002) Intrinsic disorder and protein function. Biochemistry 41, 6573-6582.
-
(2002)
Biochemistry
, vol.41
, pp. 6573-6582
-
-
Dunker, A.K.1
Brown, C.J.2
Lawsor, J.D.3
Iahoucheva, L.M.4
Obradovic, Z.5
-
53
-
-
0017922020
-
31P nuclear magentic resonance appied to a study of enzyme-catalyzed phosphate-phosphate exchange and phosphate (oxygen)-water exchange reactions
-
31P nuclear magentic resonance appied to a study of enzyme-catalyzed phosphate-phosphate exchange and phosphate (oxygen)-water exchange reactions. Proc. Natl. Acad. Sci. U.S.A. 75, 200-203.
-
(1978)
Proc. Natl. Acad. Sci. U.S.A
, vol.75
, pp. 200-203
-
-
Cohn, M.1
Hu, A.2
-
54
-
-
0001694807
-
Phosphorus magnetic resonance spectra of adenosine di- and triphosphate
-
Cohn, M., and Hughes, T. R. (1960) Phosphorus magnetic resonance spectra of adenosine di- and triphosphate. J. Biol. Chem. 235, 3250-3253.
-
(1960)
J. Biol. Chem
, vol.235
, pp. 3250-3253
-
-
Cohn, M.1
Hughes, T.R.2
-
56
-
-
0029836953
-
Discovering high-affinity ligands for proteins
-
Shukar, S. B., Hajduk, P. J., Meadows, R. P., and Fesik, S. W. (1996) Discovering high-affinity ligands for proteins. Science 274, 1531-1534.
-
(1996)
Science
, vol.274
, pp. 1531-1534
-
-
Shukar, S.B.1
Hajduk, P.J.2
Meadows, R.P.3
Fesik, S.W.4
-
57
-
-
0028900809
-
Protein structure refinement based on paramagnetic NMR shifts: Applications to wild-type and mutant forms of cytochrome c
-
Gochin, M., and Roder, H. (1995) Protein structure refinement based on paramagnetic NMR shifts: Applications to wild-type and mutant forms of cytochrome c. Protein Sci. 4, 296-305.
-
(1995)
Protein Sci
, vol.4
, pp. 296-305
-
-
Gochin, M.1
Roder, H.2
-
58
-
-
0029894147
-
The role of Glu 57 in the mechanism of the Escherichia coli MutT enzyme by mutagenesis and heteronuclear NMR
-
Lin, J., Abeygunawardana, C., Frick, D. N., Bessman, M. J., and Mildvan, A. S. (1996) The role of Glu 57 in the mechanism of the Escherichia coli MutT enzyme by mutagenesis and heteronuclear NMR. Biochemistry 35, 6715-6726.
-
(1996)
Biochemistry
, vol.35
, pp. 6715-6726
-
-
Lin, J.1
Abeygunawardana, C.2
Frick, D.N.3
Bessman, M.J.4
Mildvan, A.S.5
-
59
-
-
0031865006
-
Touring protein fold space with Dali/FSSP
-
Holm, L., and Sander, C. (1998) Touring protein fold space with Dali/FSSP. Nucleic Acids Res. 26, 316-319.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 316-319
-
-
Holm, L.1
Sander, C.2
-
60
-
-
0035818463
-
Structural genomics of enzymes involved in sterol/isoprenoid biosynthesis
-
Bonanno, J. B., Edo, C., Eswar, N., Pieper, U., Romanowski, M. J., Ilyin, V., Gerchman, S. E., Kycia, H., Studier, F. W., Sali, A., and Burley, S. K. (2001) Structural genomics of enzymes involved in sterol/isoprenoid biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 98, 12896-12901.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A
, vol.98
, pp. 12896-12901
-
-
Bonanno, J.B.1
Edo, C.2
Eswar, N.3
Pieper, U.4
Romanowski, M.J.5
Ilyin, V.6
Gerchman, S.E.7
Kycia, H.8
Studier, F.W.9
Sali, A.10
Burley, S.K.11
-
61
-
-
13044313472
-
-
White, O., Eisen, J. A., Heidelberg, J. F., Hickey, E. K., Peterson, J. D., Dodson, R. J., Haft, D. H., Gwinn, M. L., Nelson, W. C., Richardson, D. L., Moffat, K. S., Qin, H., Jiang, L., Pamphile, W., Crosby, M., Shen, M., Vamathevan, J. J., Lam, P., McDonald, L., Utterback, T., Zalewski, C., Makarova, K. S., Aravind, L., Daly, M. J., Minton, K. W., Fleischmann, R. D., Ketchum, K. A., Nelson, K. E., Salzberg, S., Smith, H. O., Venter, J. C., and Fraser, C. M. (1999) Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286, 1571-1577.
-
White, O., Eisen, J. A., Heidelberg, J. F., Hickey, E. K., Peterson, J. D., Dodson, R. J., Haft, D. H., Gwinn, M. L., Nelson, W. C., Richardson, D. L., Moffat, K. S., Qin, H., Jiang, L., Pamphile, W., Crosby, M., Shen, M., Vamathevan, J. J., Lam, P., McDonald, L., Utterback, T., Zalewski, C., Makarova, K. S., Aravind, L., Daly, M. J., Minton, K. W., Fleischmann, R. D., Ketchum, K. A., Nelson, K. E., Salzberg, S., Smith, H. O., Venter, J. C., and Fraser, C. M. (1999) Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286, 1571-1577.
-
-
-
-
62
-
-
45749096334
-
-
Anderson, A. W., Nordon, H. C., Cain, R. F., Parrish, G., and Duggan, D. (1956) Studies on a radio-resistant micrococcus. I. Isolation, morphology, cultural characteristics, and resistance to γ radiation. Food Technol. 10, 575-578.
-
Anderson, A. W., Nordon, H. C., Cain, R. F., Parrish, G., and Duggan, D. (1956) Studies on a radio-resistant micrococcus. I. Isolation, morphology, cultural characteristics, and resistance to γ radiation. Food Technol. 10, 575-578.
-
-
-
-
63
-
-
0030755081
-
Against all odd: The survival strategies of Deinococcus radiodurans
-
Battista, A. (1997) Against all odd: The survival strategies of Deinococcus radiodurans. Annu. Rev. Microbiol. 51, 203-224.
-
(1997)
Annu. Rev. Microbiol
, vol.51
, pp. 203-224
-
-
Battista, A.1
-
64
-
-
0030049354
-
Radioresistance of Deinococcus radiodurans: Functions necessary to survive ionizing radiation are also necessary to survive prolonged desiccation
-
Mattimore, V., and Battista, J. R. (1996) Radioresistance of Deinococcus radiodurans: Functions necessary to survive ionizing radiation are also necessary to survive prolonged desiccation. J. Bacteriol. 178, 633-637.
-
(1996)
J. Bacteriol
, vol.178
, pp. 633-637
-
-
Mattimore, V.1
Battista, J.R.2
-
65
-
-
0037388447
-
Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation
-
Liu, Y., Zhou, J., Omelchenko, M. V., Beliaev, A. S., Venkateswaran, A., Stair, J., Wu, L., Thompson, D. K., Xu, D., Rogozin, I. B., Gaidamakova, E. K., Zhai, M., Makarova, K. S., Koonin, E. V., and Daly, M. J. (2003) Transcriptome dynamics of Deinococcus radiodurans recovering from ionizing radiation. Proc. Natl. Acad. Sci. U.S.A. 100, 4193-4196.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A
, vol.100
, pp. 4193-4196
-
-
Liu, Y.1
Zhou, J.2
Omelchenko, M.V.3
Beliaev, A.S.4
Venkateswaran, A.5
Stair, J.6
Wu, L.7
Thompson, D.K.8
Xu, D.9
Rogozin, I.B.10
Gaidamakova, E.K.11
Zhai, M.12
Makarova, K.S.13
Koonin, E.V.14
Daly, M.J.15
-
66
-
-
0037143692
-
Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags
-
Lipton, M. S., Pasa-Tolic, L., Anderson, G. A., Anderson, D. J., Auberry, D. L., Battista, J. R., Daly, M. J., Fredrickson, J., Hixson, K. K., Kostandarithes, H., Masselon, C., Markillie, L. M., Moore, R. J., Romine, M. F., Shen, Y., Stritmatter, E., Tolic, N., Udseth, H. R., Venkateswaran, A., Wong, K.-K., Zhao, R., and Smith, R. D. (2002) Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags. Proc. Natl. Acad. Sci. U.S.A. 99, 11049-11054.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A
, vol.99
, pp. 11049-11054
-
-
Lipton, M.S.1
Pasa-Tolic, L.2
Anderson, G.A.3
Anderson, D.J.4
Auberry, D.L.5
Battista, J.R.6
Daly, M.J.7
Fredrickson, J.8
Hixson, K.K.9
Kostandarithes, H.10
Masselon, C.11
Markillie, L.M.12
Moore, R.J.13
Romine, M.F.14
Shen, Y.15
Stritmatter, E.16
Tolic, N.17
Udseth, H.R.18
Venkateswaran, A.19
Wong, K.-K.20
Zhao, R.21
Smith, R.D.22
more..
-
67
-
-
0028279759
-
DNA repair in the extremely radioresistant bacterium Deinococcus radiodurans
-
Milton, K. W. (1994) DNA repair in the extremely radioresistant bacterium Deinococcus radiodurans. Mol. Microbiol. 13, 9-15.
-
(1994)
Mol. Microbiol
, vol.13
, pp. 9-15
-
-
Milton, K.W.1
|