Conditional switches for extracellular matrix patterning in Drosophila melanogaster

Genetics

Volumn 178, Issue 3, 2008, Pages 1283-1293

  Khokhar, Arvinder ^a   Chen, Nan ^a   Yuan, Ji Ping ^a   Li, Yishi ^a   Landis, Gary N ^a   Beaulieu, Gregory ^a   Kaur, Harminder ^a   Tower, John ^a,b  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^b Section on Molecular and Computational Biology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCINEURIN; CALCIUM ION; CALRETICULIN; MITOGEN ACTIVATED PROTEIN KINASE; PHOSPHATIDYLINOSITOL 3 KINASE; PROTEIN KINASE B; PROTEIN SERINE THREONINE KINASE; TRANSCRIPTION FACTOR; TRANSFORMING GROWTH FACTOR BETA; DOXYCYCLINE;

ANIMAL CELL; ARTICLE; BEHAVIOR; CELL ADHESION; CELL JUNCTION; CELL MOTION; CONTROLLED STUDY; DESMOSOME; DROSOPHILA MELANOGASTER; EGG SHELL; EMBRYO; EMBRYO PATTERN FORMATION; EPITHELIUM CELL; EXTRACELLULAR MATRIX; FEMALE; GAMETOGENESIS; GENE INDUCTION; GENE MUTATION; GENE OVEREXPRESSION; GENE SWITCHING; LEARNING; MUTAGENESIS; MUTANT; NONHUMAN; NUCLEOTIDE SEQUENCE; OVARY FOLLICLE CELL; PHENOTYPE; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; ANIMAL; CYTOLOGY; DOMINANT GENE; DRUG EFFECT; EXON; FORELIMB; GENE EXPRESSION REGULATION; GENETICS; INTRON; METABOLISM; MUTATION; ORGANOGENESIS; OVARY FOLLICLE; PRENATAL DEVELOPMENT; ULTRASTRUCTURE;

ANIMALIA; DROSOPHILA MELANOGASTER; MAMMALIA; OSA;

ANIMALS; DOXYCYCLINE; DROSOPHILA MELANOGASTER; EGG SHELL; EXONS; EXTRACELLULAR MATRIX; FEMALE; GENE EXPRESSION REGULATION; GENES, DOMINANT; INTRONS; MUTATION; ORGANOGENESIS; OVARIAN FOLLICLE; WING;

EID: 45149131771     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.106.065912     Document Type: Article

References (64)

1. ALLIKIAN, M. J., D. DECKERT-CRUZ, M. R. ROSE, G. N. LANDIS and J. TOWER, 2002 Doxycycline-induced expression of sense and inverted-repeat constructs modulates phosphogluconate mutase (Pgm) gene expression in adult Drosophila melanogaster. Genome Biol. 3: research0021.
2. ARAUJO, H., E. NEGREIROS and E. BIER, 2003 Integrins modulate Sog activity in the Drosophila wing. Development 130: 3851-3864.
3. BELLEN, H. J., R. W. LEVIS, G. LIAO, Y. HE, J. W. CARLSON et al., 2004 The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes. Genetics 167: 761-781.
4. BERG, C. A., 2005 The Drosophila shell game: patterning genes and morphological change. Trends Genet. 21: 346-355.
5. BIESCHKE, E. T., J. C. WHEELER and J. TOWER, 1998 Doxycycline-induced transgene expression during Drosophila development and aging. Mol. Gen. Genet. 258: 571-579.
6. CABERNARD, C., M. NEUMANN and M. AFFOLTER, 2004 Cellular and molecular mechanisms involved in branching morphogenesis of the Drosophila tracheal system. J. Appl. Physiol. 97: 2347-2353.
7. CHEN, C. M., W. STRAPPS, A. TOMLINSON and G. STRUHL, 2004 Evidence that the cysteine-rich domain of Drosophila Frizzled family receptors is dispensable for transducing Wingless. Proc. Natl. Acad. Sci. USA 101: 15961-15966.
8. CHEN, Y., and T. SCHÜPBACH, 2006 The role of brinker in eggshell patterning. Mech. Dev. 123: 395-406.
9. CROZATIER, M., B. GLISE and A. VINCENT, 2004 Patterns in evolution: veins of the Drosophila wing. Trends Genet. 20: 498-505.
10. DAI, P., H. AKIMARU and S. ISHII, 2003 A hedgehog-responsive region in the Drosophila wing disc is defined by debra-mediated ubiquitination and lysosomal degradation of Ci. Dev. Cell 4: 917-928.
11. DAMMAI, V., B. ADRYAN, K. R. LAVENBURG and T. HSU, 2003 Drosophila awd, the homolog of human nm23, regulates FGF receptor levels and functions synergistically with shi/dynamin during tracheal development. Genes Dev. 17: 2812-2824.
12. DATTA, P. K., and H. L. MOSES, 2000 STRAP and Smad7 synergize in the inhibition of transforming growth factor beta signaling. Mol. Cell. Biol. 20: 3157-3167.
13. DATTA, P. K., A. CHYTIL, A. E. GORSKA and H. L. MOSES, 1998 Identification of STRAP, a novel WD domain protein in transforming growth factor-beta signaling. J. Biol. Chem. 273: 34671-34674.
14. DE CELIS, J. F., 2003 Pattern formation in the Drosophila wing: the development of the veins. BioEssays 25: 443-451.
15. DENG, W. M., and M. BOWNES, 1997 Two signalling pathways specify localised expression of the Broad-Complex in Drosophila eggshell patterning and morphogenesis. Development 124: 4639-4647.
16. DORMAN, J. B., K. E. JAMES, S. E. FRASER, D. P. KIEHART and C. A. BERG, 2004 bullwinkle is required for epithelial morphogenesis during Drosophila oogenesis. Dev. Biol. 267: 320-341.
17. FOSSETT, N., S. G. TEVOSIAN, K. GAJEWSKI, Q. ZHANG, S. H. ORKIN et al., 2001 The Friend of GATA proteins U-shaped, FOG-1, and FOG-2 function as negative regulators of blood, heart, and eye development in Drosophila. Proc. Natl. Acad. Sci. USA 98: 7342-7347.
18. GHABRIAL, A. S., and M. A. KRASNOW, 2006 Social interactions among epithelial cells during tracheal branching morphogenesis. Nature 441: 746-749.
19. GLESNE, D. A., W. ZHANG, S. MANDAVA, L. URSOS, M. E. BUELL et al., 2006 Subtractive transcriptomics: establishing polarity drives in vitro human endothelial morphogenesis. Cancer Res. 66: 4030-4040.
20. GU, Y., and D. L. NELSON, 2003 FMR2 function: insight from a mouse knockout model. Cytogenet. Genome Res. 100: 129-139.
21. HAN, H. J., W. J. SIGURDSON, P. A. NICKERSON and M. TAUB, 2004 Both mitogen activated protein kinase and the mammalian target of rapamycin modulate the development of functional renal proximal tubules in matrigel. J. Cell Sci. 117: 1821-1833.
22. JUNG, A. C., B. DENHOLM, H. SKAER and M. AFFOLTER, 2005 Renal tubule development in Drosophila: a closer look at the cellular level. J. Am. Soc. Nephrol. 16: 322-328.
23. KIM, J. W., I. TCHERNYSHYOV, G. L. SEMENZA and C. V. DANG, 2006 HIF-1-mediated expression of pyruvate dehydrogenase kinase: a metabolic switch required for cellular adaptation to hypoxia. Cell Metab. 3: 177-185.
24. KLEVE, C. D., D. A. SILER, S. K. SYED and E. D. ELDON, 2006 Expression of 18-wheeler in the follicle cell epithelium affects cell migration and egg morphology in Drosophila. Dev. Dyn. 235: 1953-1961.
25. LANDIS, G., D. BHOLE, L. LU and J. TOWER, 2001 High-frequency generation of conditional mutations affecting Drosophila melanogaster development and life span. Genetics 158: 1167-1176.
26. LANDIS, G. N., D. BHOLE and J. TOWER, 2003 A search for doxycycline-dependent mutations that increase Drosophila melanogaster life span identifies the VhaSFD, Sugar baby, filamin, fwd and Cctl genes. Genome Biol. 4: R8.
27. LAVENBURG, K. R., J. IVEY, T. HSU and R. C. MUISE-HELMERICKS, 2003 Coordinated functions of Akt/PKB and ETS1 in tubule formation. FASEB J. 17: 2278-2280.
28. LECUIT, T., and F. PILOT, 2003 Developmental control of cell morphogenesis: a focus on membrane growth. Nat. Cell Biol. 5: 103-108.
29. LEHTINEN, M. K., Z. YUAN, P. R. BOAG, Y. YANG, J. VILLEN et al., 2006 A conserved MST-FOXO signaling pathway mediates oxidative-stress responses and extends life span. Cell 125: 987-1001.
30. LEVI, B. P., A. S. GHABRIAL and M. A. KRASNOW, 2006 Drosophila talin and integrin genes are required for maintenance of tracheal terminal branches and luminal organization. Development 133: 2383-2393.
31. LYNCH, J., L. GUO, P. GELEBART, K. CHILIBECK, J. XU et al., 2005 Calreticulin signals upstream of calcineurin and MEF2C in a critical Ca(2+)-dependent signaling cascade. J. Cell Biol. 170: 37-47.
32. MARGOLIS, J., and A. C. SPRADLING, 1995 Identification and behavior of epithelial stem cells in the Drosophila ovary. Development 121: 3797-3807.
33. MEYER, T. N., C. SCHWESINGER, K. T. BUSH, R. O. STUART, D. W. ROSE et al., 2004 Spatiotemporal regulation of morphogenetic molecules during in vitro branching of the isolated ureteric bud: toward a model of branching through budding in the developing kidney. Dev. Biol. 275: 44-67.
34. MONTELL, D. J., 2006 The social lives of migrating cells in Drosophila. Curr. Opin. Genet. Dev. 16: 374-383.
35. NAMBU, J. R., W. CHEN, S. HU and S. T. CREWS, 1996 The Drosophila melanogaster similar bHLH-PAS gene encodes a protein related to human hypoxia-inducible factor 1 alpha and Drosophila single-minded. Gene 172: 249-254.
36. NEUMANN, M., and M. AFFOLTER, 2006 Remodeling epithelial tubes through cell rearrangements: from cells to molecules. EMBO Rep. 7: 36-40.
37. O'CONNELL, P., and M. ROSBASH, 1984 Sequence, structure, and codon preference of the Drosophila ribosomal protein 49 gene. Nucleic Acids Res. 12: 5495-5513.
38. PALACIOS, F., J. K. SCHWEITZER, R. L. BOSHANS and C. D'SOUZA-SCHOREY, 2002 ARF6-GTP recruits Nm23-H1 to facilitate dynamin-mediated endocytosis during adherens junctions disassembly. Nat. Cell Biol. 4: 929-936.
39. PAPADIA, S., G. TZOLOVSKY, D. ZHAO, K. LEAPER, D. CLYDE et al., 2005 emc has a role in dorsal appendage fate formation in Drosophila oogenesis. Mech. Dev. 122: 961-974.
40. PAPANDREOU, I., R. A. CAIRNS, L. FONTANA, A. L. LIM and N. C. DENKO, 2006 HIF-1mediates adaptation to hypoxia by actively downregulating mitochondrial oxygen consumption. Cell Metab. 3: 187-197.
41. PEÑA-RANGEL, M. T., I. RODRIGUEZ and J. R. RIESGO-ESCOVAR, 2002 A misexpression study examining dorsal thorax formation in Drosophila melanogaster. Genetics 160: 1035-1050.
42. PETIT, V., C. RIBEIRO, A. EBNER and M. AFFOLTER, 2002 Regulation of cell migration during tracheal development in Drosophila melanogaster. Int. J. Dev. Biol. 46: 125-132.
43. PILOT, F., and T. LECUIT, 2005 Compartmentalized morphogenesis in epithelia: from cell to tissue shape. Dev. Dyn. 232: 685-694.
44. RAISIN, S., S. PANTALACCI, J. P. BREITTMAYER and P. LEOPOLD, 2003 A new genetic locus controlling growth and proliferation in Drosophila melanogaster. Genetics 164: 1015-1025.
45. REILING, J. H., and E. HAFEN, 2004 The hypoxia-induced paralogs Scylla and Charybdis inhibit growth by down-regulating S6K activity upstream of TSC in Drosophila. Genes Dev. 18: 2879-2892.
46. REYA, T., and H. CLEVERS, 2005 Wnt signalling in stem cells and cancer. Nature 434: 843-850.
47. ROBERTSON, H. M., C. R. PRESTON, R. W. PHILLIS, D. M. JOHNSON-SCHLITZ, W. K. BENZ et al., 1988 A stable genomic source of P element transposase in Drosophila melanogaster. Genetics 118: 461-470.
48. RORTH, P., 1998 Gal4 in the Drosophila female germline. Mech. Dev. 78: 113-118.
49. RORTH, P., K. SZABO, A. BAILEY, T. LAVERTY, J. REHM et al., 1998 Systematic gain-of-function genetics in Drosophila. Development 125: 1049-1057.
50. ROSARIO, M., and W. BIRCHMEIER, 2003 How to make tubes: signaling by the Met receptor tyrosine kinase. Trends Cell Biol. 13: 328-335.
51. SAMAKOVLIS, C., N. HACOHEN, G. MANNING, D. C. SUTHERLAND, K. GUILLEMIN et al., 1996 Development of the Drosophila tracheal system occurs by a series of morphologically distinct but genetically coupled branching events. Development 122: 1395-1407.
52. SEONG, H. A., H. JUNG, H. S. CHOI, K. T. KIM and H. HA, 2005 Regulation of transforming growth factor-beta signaling and PDK1 kinase activity by physical interaction between PDK1 and serine-threonine kinase receptor-associated protein. J. Biol. Chem. 280: 42897-42908.
53. SORIANO, J. V., N. LIU, Y. GAO, Z. J. YAO, T. ISHIBASHI et al., 2004 Inhibition of angiogenesis by growth factor receptor bound protein 2-Src homology 2 domain bound antagonists. Mol. Cancer Ther. 3: 1289-1299.
54. STAPLETON, M., J. CARLSON, P. BROKSTEIN, C. YU, M. CHAMPE et al., 2002 A Drosophila full-length cDNA resource. Genome Biol. 3: RESEARCH0080.
55. SU, M. A., R. G. WISOTZKEY and S. J. NEWFELD, 2001 A screen for modifiers of decapentaplegic mutant phenotypes identifies lilliputian, the only member of the Fragile-X/Burkitt's lymphoma family of transcription factors in Drosophila melanogaster. Genetics 157: 717-725.
56. TANG, A. H., T. P. NEUFELD, G. M. RUBIN and H. A. MULLER, 2001 Transcriptional regulation of cytoskeletal functions and segmentation by a novel maternal pair-rule gene, lilliputian. Development 128: 801-813.
57. TSENG, A. S., and I. K. HARIHARAN, 2002 An overexpression screen in Drosophila for genes that restrict growth or cell-cycle progression in the developing eye. Genetics 162: 229-243.
58. TZOLOVSKY, G., W. M. DENG, T. SCHLITT and M. BOWNES, 1999 The function of the broad-complex during Drosophila melanogaster oogenesis. Genetics 153: 1371-1383.
59. VAN DE WETERING, M., E. SANCHO, C. VERWEIJ, W. DE LAU, I. OVING et al., 2002 The beta-catenin/TCF-4 complex imposes a crypt progenitor phenotype on colorectal cancer cells. Cell 111: 241-250.
60. VOGT, P. K., H. JIANG and M. AOKI, 2005 Triple layer control: phosphorylation, acetylation and ubiquitination of FOXO proteins. Cell Cycle 4: 908-913.
61. WARD, E. J., X. ZHOU, L. M. RIDDIFORD, C. A. BERG and H. RUOHOLA-BAKER, 2006 Border of Notch activity establishes a boundary between the two dorsal appendage tube cell types. Dev. Biol. 297: 461-470.
62. WITTWER, F., A. VAN DER STRATEN, K. KELEMAN, B. J. DICKSON and E. HAFEN, 2001 Lilliputian: an AF4/FMR2-related protein that controls cell identity and cell growth. Development 128: 791-800.
63. WOLFF, S., H. MA, D. BURCH, G. A. MACIEL, T. HUNTER et al., 2006 SMK-1, an essential regulator of DAF-16-mediated longevity. Cell 124: 1039-1053.
64. YAMADA, T., M. OKABE and Y. HIROMI, 2003 EDL/MAE regulates EGF-mediated induction by antagonizing Ets transcription factor Pointed. Development 130: 4085-4096.