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Volumn 15, Issue 4, 2008, Pages 471-486

Chromatin tethering effects of hNopp140 are involved in the spatial organization of nucleolus and the rRNA gene transcription

Author keywords

Acrocentric chromosomes; Alpha satellite DNA; Centromere; Nopp140; Nucleolus; rDNA

Indexed keywords

MUTANT PROTEIN; PHOSPHOPROTEIN; PROTEIN NOPP140; REPETITIVE DNA;

EID: 44949083579     PISSN: 10217770     EISSN: 14230127     Source Type: Journal    
DOI: 10.1007/s11373-007-9226-7     Document Type: Article
Times cited : (26)

References (58)
  • 3
    • 0029053229 scopus 로고
    • Human ribosomal RNA gene cluster: Identification of the proximal end containing a novel tandem repeat sequence
    • Sakai K, Ohta T, Minoshima S, Kudoh J, Wang Y, de Jong PJ, Shimizu N (1995) Human ribosomal RNA gene cluster: identification of the proximal end containing a novel tandem repeat sequence. Genomics 26:521-526
    • (1995) Genomics , vol.26 , pp. 521-526
    • Sakai, K.1    Ohta, T.2    Minoshima, S.3    Kudoh, J.4    Wang, Y.5    De Jong, P.J.6    Shimizu, N.7
  • 4
    • 0024709994 scopus 로고
    • Evolution of alpha-satellite DNA on human acrocentric chromosomes
    • Choo KH, Vissel B, Earle E (1989) Evolution of alpha-satellite DNA on human acrocentric chromosomes. Genomics 5:332-344
    • (1989) Genomics , vol.5 , pp. 332-344
    • Choo, K.H.1    Vissel, B.2    Earle, E.3
  • 5
    • 0026583457 scopus 로고
    • Beta-satellite DNA: Characterization and localization of two subfamilies from the distal and proximal short arms of the human acrocentric chromosomes
    • Greig GM, Willard HF (1992) Beta-satellite DNA: characterization and localization of two subfamilies from the distal and proximal short arms of the human acrocentric chromosomes. Genomics 12:573-580
    • (1992) Genomics , vol.12 , pp. 573-580
    • Greig, G.M.1    Willard, H.F.2
  • 6
    • 0031571606 scopus 로고    scopus 로고
    • Contiguous arrays of satellites 1, 3, and β form a 1.5-Mb domain on chromosome 22p
    • Shiels C, Coutelle C, Huxley C (1997) Contiguous arrays of satellites 1, 3, and β form a 1.5-Mb domain on chromosome 22p. Genomics 44:35-44
    • (1997) Genomics , vol.44 , pp. 35-44
    • Shiels, C.1    Coutelle, C.2    Huxley, C.3
  • 8
    • 0027299218 scopus 로고
    • Structure, function and assembly of the nucleolus
    • Scheer U, Thiry M, Goessens G (1993) Structure, function and assembly of the nucleolus. Trends Cell Biol 3:236-241
    • (1993) Trends Cell Biol , vol.3 , pp. 236-241
    • Scheer, U.1    Thiry, M.2    Goessens, G.3
  • 9
    • 0034193778 scopus 로고    scopus 로고
    • The nucleolus: An old factory with unexpected capabilities
    • Olson MOJ, Dundr M, Szebeni A (2000) The nucleolus: an old factory with unexpected capabilities. Trends Cell Biol 10:189-196
    • (2000) Trends Cell Biol , vol.10 , pp. 189-196
    • Olson, M.O.J.1    Dundr, M.2    Szebeni, A.3
  • 17
    • 0031813779 scopus 로고    scopus 로고
    • Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei
    • Jackson DA, Iborra FJ, Manders EMM, Cook PR (1998) Numbers and organization of RNA polymerases, nascent transcripts, and transcription units in HeLa nuclei. Mol Biol Cell 9:1523-1536
    • (1998) Mol Biol Cell , vol.9 , pp. 1523-1536
    • Jackson, D.A.1    Iborra, F.J.2    Manders, E.M.M.3    Cook, P.R.4
  • 19
    • 30044434446 scopus 로고    scopus 로고
    • Nucleolus: From structure to dynamics
    • Hernandez-Verdun D (2006) Nucleolus: from structure to dynamics. Histochem Cell Biol 125:127-137
    • (2006) Histochem Cell Biol , vol.125 , pp. 127-137
    • Hernandez-Verdun, D.1
  • 20
    • 0025039738 scopus 로고
    • Ultrastructural cytochemistry of the mammalian cell nucleolus
    • Derenzini M, Thiry M, Goessens G (1990) Ultrastructural cytochemistry of the mammalian cell nucleolus. J Histochem Cytochem 38:1237-1256
    • (1990) J Histochem Cytochem , vol.38 , pp. 1237-1256
    • Derenzini, M.1    Thiry, M.2    Goessens, G.3
  • 21
    • 0037182588 scopus 로고    scopus 로고
    • Ribosomal genes in focus: New transcripts label the dense fibrillar components and form clusters indicative of "christmas trees" in situ
    • Koberna K, Malínsky J, Pliss A, Mašata M, Vecerová J, Fialová M, Bednár J, Raška I (2002) Ribosomal genes in focus: new transcripts label the dense fibrillar components and form clusters indicative of "Christmas trees" in situ. J Cell Biol 157:743-748
    • (2002) J Cell Biol , vol.157 , pp. 743-748
    • Koberna, K.1    Malínsky, J.2    Pliss, A.3    Mašata, M.4    Vecerová, J.5    Fialová, M.6    Bednár, J.7    Raška, I.8
  • 22
    • 1542713801 scopus 로고    scopus 로고
    • Oldies but goldies: Searching for Christmas trees within the nucleolar architecture
    • Raška I (2003) Oldies but goldies: searching for Christmas trees within the nucleolar architecture. Trends Cell Biol 13:517-525
    • (2003) Trends Cell Biol , vol.13 , pp. 517-525
    • Raška, I.1
  • 23
    • 0030786573 scopus 로고    scopus 로고
    • Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization
    • Lazdins IB, Delannoy M, Sollner-Webb B (1997) Analysis of nucleolar transcription and processing domains and pre-rRNA movements by in situ hybridization. Chromosoma 105:481-495
    • (1997) Chromosoma , vol.105 , pp. 481-495
    • Lazdins, I.B.1    Delannoy, M.2    Sollner-Webb, B.3
  • 24
    • 0030738274 scopus 로고    scopus 로고
    • Early stages of pre-rRNA formation within the nucleolar ultrastructure of mouse cells studied by in situ hybridization with a 5′ETS leader probe
    • Puvion-Dutilleul F, Puvion E, Bachellerie J-P (1997) Early stages of pre-rRNA formation within the nucleolar ultrastructure of mouse cells studied by in situ hybridization with a 5′ETS leader probe. Chromosoma 105:496-505
    • (1997) Chromosoma , vol.105 , pp. 496-505
    • Puvion-Dutilleul, F.1    Puvion, E.2    Bachellerie, J.-P.3
  • 25
    • 0025785797 scopus 로고
    • Nucleolar organization of HeLa cells as studied by in situ hybridization
    • Puvion-Dutilleul F, Bachellerie J-P Puvion E (1991) Nucleolar organization of HeLa cells as studied by in situ hybridization. Chromosoma 100:395-409
    • (1991) Chromosoma , vol.100 , pp. 395-409
    • Puvion-Dutilleul, F.1    Bachellerie Puvion, J.-P.E.2
  • 26
    • 0034545067 scopus 로고    scopus 로고
    • Dynamics and three-dimensional localization of ribosomal RNA within the nucleolus
    • Thiry M, Cheutin T, O'Donohue M-F, Kaplan H, Ploton D (2000) Dynamics and three-dimensional localization of ribosomal RNA within the nucleolus. RNA 6:1750-1761
    • (2000) RNA , vol.6 , pp. 1750-1761
    • Thiry, M.1    Cheutin, T.2    O'Donohue, M.-F.3    Kaplan, H.4    Ploton, D.5
  • 27
    • 0026773097 scopus 로고
    • Nopp140 shuttles on tracks between nucleolus and cytoplasm
    • Meier UT, Blobel G (1992) Nopp140 shuttles on tracks between nucleolus and cytoplasm. Cell 70:127-138
    • (1992) Cell , vol.70 , pp. 127-138
    • Meier, U.T.1    Blobel, G.2
  • 28
    • 0029050553 scopus 로고
    • Cell cycle-dependent alterations of a highly phosphorylated nucleolar protein p130 are associated with nucleologenesis
    • Pai C-Y, Chen H-K, Sheu H-L, Yeh N-H (1995) Cell cycle-dependent alterations of a highly phosphorylated nucleolar protein p130 are associated with nucleologenesis. J Cell Sci 108:1911-1920
    • (1995) J Cell Sci , vol.108 , pp. 1911-1920
    • Pai, C.-Y.1    Chen, H.-K.2    Sheu, H.-L.3    Yeh, N.-H.4
  • 29
    • 0029084987 scopus 로고
    • Identification and cDNA cloning of a Xenopus nucleolar phosphoprotein, xNopp180, that is the homolog of the rat nucleolar protein Nopp140
    • Cairns C, McStay B (1995) Identification and cDNA cloning of a Xenopus nucleolar phosphoprotein, xNopp180, that is the homolog of the rat nucleolar protein Nopp140. J Cell Sci 108:3339-3347
    • (1995) J Cell Sci , vol.108 , pp. 3339-3347
    • Cairns, C.1    McStay, B.2
  • 30
    • 0036153881 scopus 로고    scopus 로고
    • Two splice variants of Nopp140 in Drosophila melanogaster
    • Waggener JM, DiMario PJ (2002) Two splice variants of Nopp140 in Drosophila melanogaster. Mol Biol Cell 13:362-381
    • (2002) Mol Biol Cell , vol.13 , pp. 362-381
    • Waggener, J.M.1    Dimario, P.J.2
  • 31
    • 33646909888 scopus 로고    scopus 로고
    • Characterization and differential nuclear localization of Nopp140 and a novel Nopp140-like protein in Trypanosomes
    • Kelly S, Singleton W, Wickstead B, Ersfeld K, Gull K (2006) Characterization and differential nuclear localization of Nopp140 and a novel Nopp140-like protein in Trypanosomes. Eukaryot Cell 5:876-879
    • (2006) Eukaryot Cell , vol.5 , pp. 876-879
    • Kelly, S.1    Singleton, W.2    Wickstead, B.3    Ersfeld, K.4    Gull, K.5
  • 32
    • 0029776366 scopus 로고    scopus 로고
    • Comparison of the rat nucleolar protein Nopp140 with its yeast homolog SRP40
    • Meier UT (1996) Comparison of the rat nucleolar protein Nopp140 with its yeast homolog SRP40. J Biol Chem 271:19376-19384
    • (1996) J Biol Chem , vol.271 , pp. 19376-19384
    • Meier, U.T.1
  • 33
    • 0033499709 scopus 로고    scopus 로고
    • Human Nopp140, which interacts with RNA polymerase I: Implications for rRNA gene transcription and nucleolar structural organization
    • Chen H-K, Pai C-Y, Huang J-Y, Yeh N-H (1999) Human Nopp140, which interacts with RNA polymerase I: implications for rRNA gene transcription and nucleolar structural organization. Mol Cell Biol 19:8536-8546
    • (1999) Mol Cell Biol , vol.19 , pp. 8536-8546
    • Chen, H.-K.1    Pai, C.-Y.2    Huang, J.-Y.3    Yeh, N.-H.4
  • 34
    • 0034001337 scopus 로고    scopus 로고
    • Conserved composition of mammalian Box H/ACA and Box C/D small nucleolar ribonucleoprotein particles and their interaction with the common factor Nopp140
    • Yang Y, Isaac C, Wang C, Dragon F, Pogacic V, Meier UT (2000) Conserved composition of mammalian Box H/ACA and Box C/D small nucleolar ribonucleoprotein particles and their interaction with the common factor Nopp140. Mol Biol Cell 11:567-577
    • (2000) Mol Biol Cell , vol.11 , pp. 567-577
    • Yang, Y.1    Isaac, C.2    Wang, C.3    Dragon, F.4    Pogacic, V.5    Meier, U.T.6
  • 35
    • 18744363324 scopus 로고    scopus 로고
    • Immunopurified small nucleolar ribonucleoprotein particles pseudouridylate rRNA independently of their association with phosphorylated Nopp140, Mol
    • Wang C, Query CC, Meier UT (2002) Immunopurified small nucleolar ribonucleoprotein particles pseudouridylate rRNA independently of their association with phosphorylated Nopp140, Mol. Cell Biol 22:8457-8466
    • (2002) Cell Biol , vol.22 , pp. 8457-8466
    • Wang, C.1    Query, C.C.2    Meier, U.T.3
  • 37
    • 0032572411 scopus 로고    scopus 로고
    • Nopp140 functions as a molecular link between the nucleolus and the coiled bodies
    • Isaac C, Yang Y, Meier UT (1998) Nopp140 functions as a molecular link between the nucleolus and the coiled bodies. J Cell Biol 142:319-329
    • (1998) J Cell Biol , vol.142 , pp. 319-329
    • Isaac, C.1    Yang, Y.2    Meier, U.T.3
  • 39
    • 34548661070 scopus 로고    scopus 로고
    • Apoptotic cleavage of NuMA at the C-terminal end is related to nuclear disruption and death amplification
    • Lin H-H, Hsu H-L, Yeh N-H (2007) Apoptotic cleavage of NuMA at the C-terminal end is related to nuclear disruption and death amplification. J Biomed Sci 14:681-694
    • (2007) J Biomed Sci , vol.14 , pp. 681-694
    • Lin, H.-H.1    Hsu, H.-L.2    Yeh, N.-H.3
  • 40
    • 0026070467 scopus 로고
    • A human chromosome 9-specific alphoid DNA repeat spatially resolvable from satellite 3 DNA by fluorescent in situ hybridization
    • Rocchi M, Archidiacono N, Ward DC, Baldini A (1991) A human chromosome 9-specific alphoid DNA repeat spatially resolvable from satellite 3 DNA by fluorescent in situ hybridization. Genomics 9:517-523
    • (1991) Genomics , vol.9 , pp. 517-523
    • Rocchi, M.1    Archidiacono, N.2    Ward, D.C.3    Baldini, A.4
  • 41
    • 0006838454 scopus 로고
    • Microwave activation of fluorescence in situ hybridization: A novel method for rapid chromosome detection and analysis
    • Soloviev IV, Yurov YB, Vorsanova SG, Malet P (1994) Microwave activation of fluorescence in situ hybridization: a novel method for rapid chromosome detection and analysis. Focus 16:115-116
    • (1994) Focus , vol.16 , pp. 115-116
    • Soloviev, I.V.1    Yurov, Y.B.2    Vorsanova, S.G.3    Malet, P.4
  • 42
    • 0036024952 scopus 로고    scopus 로고
    • Visualizing nuclear proteins together with transcribed and inactive genes in structurally preserved cells
    • Brown K (2002) Visualizing nuclear proteins together with transcribed and inactive genes in structurally preserved cells. Methods 26:10-18
    • (2002) Methods , vol.26 , pp. 10-18
    • Brown, K.1
  • 43
    • 0036024955 scopus 로고    scopus 로고
    • Identification of unknown target genes of human transcription factors using chromatin immunoprecipitation
    • Weinmann AS, Farnham PJ (2002) Identification of unknown target genes of human transcription factors using chromatin immunoprecipitation. Methods 26:37-47
    • (2002) Methods , vol.26 , pp. 37-47
    • Weinmann, A.S.1    Farnham, P.J.2
  • 45
    • 0026636612 scopus 로고
    • Centromere autoantigens are associated with the nucleolus
    • Ochs RL, Press RI (1992) Centromere autoantigens are associated with the nucleolus. Exp Cell Res 200:339-350
    • (1992) Exp Cell Res , vol.200 , pp. 339-350
    • Ochs, R.L.1    Press, R.I.2
  • 46
    • 33745184916 scopus 로고    scopus 로고
    • Tau protein binds to pericentromeric DNA: A putative role for nuclear tau in nucleolar organization
    • Sjöberg MK, Shestakova E, Mansuroglu Z, Maccioni RB, Bonnefoy E (2006) Tau protein binds to pericentromeric DNA: a putative role for nuclear tau in nucleolar organization. J Cell Sci 119:2025-2034
    • (2006) J Cell Sci , vol.119 , pp. 2025-2034
    • Sjöberg, M.K.1    Shestakova, E.2    Mansuroglu, Z.3    MacCioni, R.B.4    Bonnefoy, E.5
  • 48
    • 34547936557 scopus 로고    scopus 로고
    • Recruitment of factors linking transcription and processing of pre-rRNA to NOR chromatin is UBF-dependent and occurs independent of transcription in human cells
    • Prieto J-L, McStay B (2007) Recruitment of factors linking transcription and processing of pre-rRNA to NOR chromatin is UBF-dependent and occurs independent of transcription in human cells. Genes Dev 21:2041-2054
    • (2007) Genes Dev , vol.21 , pp. 2041-2054
    • Prieto, J.-L.1    McStay, B.2
  • 50
    • 0035355351 scopus 로고    scopus 로고
    • Human acrocentric chromosomes with transcriptionally silent nucleolar organizer regions associate with nucleoli
    • Sullivan GJ, Bridger JM, Cuthbert AP, Newbold RF, Bickmore WA, McStay B (2001) Human acrocentric chromosomes with transcriptionally silent nucleolar organizer regions associate with nucleoli. EMBO J 20:2867-2877
    • (2001) EMBO J , vol.20 , pp. 2867-2877
    • Sullivan, G.J.1    Bridger, J.M.2    Cuthbert, A.P.3    Newbold, R.F.4    Bickmore, W.A.5    McStay, B.6
  • 51
    • 33746277552 scopus 로고    scopus 로고
    • Structure and function of the nucleolus in the spotlight
    • Raška I, Shaw PJ, Cmarko D (2006) Structure and function of the nucleolus in the spotlight. Curr Opin Cell Biol 18:325-334
    • (2006) Curr Opin Cell Biol , vol.18 , pp. 325-334
    • Raška, I.1    Shaw, P.J.2    Cmarko, D.3
  • 52
    • 0033546210 scopus 로고    scopus 로고
    • The organization of replication and transcription
    • Cook PR (1999) The organization of replication and transcription. Science 284:1790-1795
    • (1999) Science , vol.284 , pp. 1790-1795
    • Cook, P.R.1
  • 53
    • 0027499230 scopus 로고
    • Visualization of focal sites of transcription within human nuclei
    • Jackson DA, Hassan AB, Errington RJ, Cook PR (1993) Visualization of focal sites of transcription within human nuclei. EMBO J 12:1059-1065
    • (1993) EMBO J , vol.12 , pp. 1059-1065
    • Jackson, D.A.1    Hassan, A.B.2    Errington, R.J.3    Cook, P.R.4
  • 55
    • 32044449232 scopus 로고    scopus 로고
    • Structural and functional organization of ribosomal genes within the mammalian cell nucleolus
    • Derenzini M, Pasquinelli G, O'Donohue M, Ploton D, Thiry M (2006) Structural and functional organization of ribosomal genes within the mammalian cell nucleolus. J Histochem Cytochem 54:131-145
    • (2006) J Histochem Cytochem , vol.54 , pp. 131-145
    • Derenzini, M.1    Pasquinelli, G.2    O'Donohue, M.3    Ploton, D.4    Thiry, M.5
  • 56
    • 0036135638 scopus 로고    scopus 로고
    • UBF binding in vivo is not restricted to regulatory sequences within the vertebrate ribosomal DNA repeat
    • O'Sullivan AC, Sullivan GJ, McStay B (2002) UBF binding in vivo is not restricted to regulatory sequences within the vertebrate ribosomal DNA repeat. Mol Cell Biol 22:657-668
    • (2002) Mol Cell Biol , vol.22 , pp. 657-668
    • O'Sullivan, A.C.1    Sullivan, G.J.2    McStay, B.3
  • 57
    • 6344285232 scopus 로고    scopus 로고
    • Upstream binding factor association induces large-scale chromatin decondensation
    • Chen D, Belmont AS, Huang S (2004) Upstream binding factor association induces large-scale chromatin decondensation. Proc Natl Acad Sci USA 101:15106-15111
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15106-15111
    • Chen, D.1    Belmont, A.S.2    Huang, S.3
  • 58
    • 11844291918 scopus 로고    scopus 로고
    • UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery
    • Mais C, Wright JE, Prieto J-L, Raggett SL, McStay B (2005) UBF-binding site arrays form pseudo-NORs and sequester the RNA polymerase I transcription machinery. Genes Dev 19:50-64
    • (2005) Genes Dev , vol.19 , pp. 50-64
    • Mais, C.1    Wright, J.E.2    Prieto, J.-L.3    Raggett, S.L.4    McStay, B.5


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