-
1
-
-
33845593742
-
Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field
-
Bae SS, Kim YJ, Yang SH, Lim JK, Jeon JH, Lee HS, Kang SG, Kim S-J, Lee J-H (2006) Thermococcus onnurineus sp. nov., a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent area at the PACMANUS field. J Microbiol Biotechnol 16:1826-1831
-
(2006)
J Microbiol Biotechnol
, vol.16
, pp. 1826-1831
-
-
Bae, S.S.1
Kim, Y.J.2
Yang, S.H.3
Lim, J.K.4
Jeon, J.H.5
Lee, H.S.6
Kang, S.G.7
Kim, S.-J.8
Lee, J.-H.9
-
2
-
-
0028211009
-
PCR amplification of up to 35-kb DNA with high fidelity and high yield from l bacteriophage templates
-
Barnes WM (1994) PCR amplification of up to 35-kb DNA with high fidelity and high yield from l bacteriophage templates. Proc Natl Acad Sci U S A 91:2216-2220
-
(1994)
Proc Natl Acad Sci U S a
, vol.91
, pp. 2216-2220
-
-
Barnes, W.M.1
-
3
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
4
-
-
34848827123
-
Characterization of a dUTPase from the hyperthermophilic archaeon Thermococcus onnurineus NA1 and its application in polymerase chain reaction amplification
-
Cho Y, Lee HS, Kim YJ, Kang SG, Kim SJ, Lee JH (2007) Characterization of a dUTPase from the hyperthermophilic archaeon Thermococcus onnurineus NA1 and its application in polymerase chain reaction amplification. Mar Biotechnol 9:450-458
-
(2007)
Mar Biotechnol
, vol.9
, pp. 450-458
-
-
Cho, Y.1
Lee, H.S.2
Kim, Y.J.3
Kang, S.G.4
Kim, S.J.5
Lee, J.H.6
-
5
-
-
0035879027
-
Biochemical characterization of a novel hypoxanthine/xanthine dNTP pyrophosphatase from Methanocaldococcus jannaschii
-
Chung JH, Back JH, Park YI, Han YS (2001) Biochemical characterization of a novel hypoxanthine/xanthine dNTP pyrophosphatase from Methanocaldococcus jannaschii. Nucleic Acids Res 29:3099-3107
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3099-3107
-
-
Chung, J.H.1
Back, J.H.2
Park, Y.I.3
Han, Y.S.4
-
6
-
-
0141539507
-
6-tagged hyper-thermostable dUTPase from Pyrococcus woesei in Escherichia coli: Application in PCR
-
6-tagged hyper-thermostable dUTPase from Pyrococcus woesei in Escherichia coli: application in PCR. Protein Expr Purif 31:72-78
-
(2003)
Protein Expr Purif
, vol.31
, pp. 72-78
-
-
Dabrowski, S.1
Ahring, B.K.2
-
7
-
-
0036894880
-
Structural basis for uracil recognition by archaeal family B DNA polymerases
-
Fogg MJ, Pearl LH, Connolly BA (2002) Structural basis for uracil recognition by archaeal family B DNA polymerases. Nature Struct Biol 9:922-927
-
(2002)
Nature Struct Biol
, vol.9
, pp. 922-927
-
-
Fogg, M.J.1
Pearl, L.H.2
Connolly, B.A.3
-
9
-
-
34548426097
-
Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases
-
Gill S, O'Neill R, Lewis RJ, Connolly BA (2007) Interaction of the family-B DNA polymerase from the archaeon Pyrococcus furiosus with deaminated bases. J Mol Biol 372:855-863
-
(2007)
J Mol Biol
, vol.372
, pp. 855-863
-
-
Gill, S.1
O'Neill, R.2
Lewis, R.J.3
Connolly, B.A.4
-
10
-
-
0033529945
-
A read-ahead function in archaeal DNA polymerases detects pro-mutagenic template-strand uracil
-
Greagg MA, Fogg MJ, Panayootu G, Evans SJ, Connolly BA, Pearl LH (1999) A read-ahead function in archaeal DNA polymerases detects pro-mutagenic template-strand uracil. Proc Natl Acad Sci U S A 96:9045-9050
-
(1999)
Proc Natl Acad Sci U S a
, vol.96
, pp. 9045-9050
-
-
Greagg, M.A.1
Fogg, M.J.2
Panayootu, G.3
Evans, S.J.4
Connolly, B.A.5
Pearl, L.H.6
-
11
-
-
0031744571
-
Hyperthermophiles and the problems of DNA instability
-
Grogan DW (1998) Hyperthermophiles and the problems of DNA instability. Mol Microbiol 28:1043-1049
-
(1998)
Mol Microbiol
, vol.28
, pp. 1043-1049
-
-
Grogan, D.W.1
-
12
-
-
0034175750
-
The question of DNA repair in hyperthermophilic archaea
-
Grogan DW (2000) The question of DNA repair in hyperthermophilic archaea. Trends Microbiol 8:180-185
-
(2000)
Trends Microbiol
, vol.8
, pp. 180-185
-
-
Grogan, D.W.1
-
13
-
-
0242317687
-
Processing of DNA lesions by archaeal DNA polymerases from Sulfolobus solfataricus
-
Gruz P, Shimizu M, Pisani FM, De Felice M, Kanke Y, Nohmi T (2003) Processing of DNA lesions by archaeal DNA polymerases from Sulfolobus solfataricus. Nucleic Acids Res 31:4024-4030
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4024-4030
-
-
Gruz, P.1
Shimizu, M.2
Pisani, F.M.3
De Felice, M.4
Kanke, Y.5
Nohmi, T.6
-
14
-
-
0022993948
-
Site-specific mutagenesis in vivo by single methylated or deaminated purine bases
-
Hill-Perkins M, Jones MD, Karran P (1986) Site-specific mutagenesis in vivo by single methylated or deaminated purine bases. Mutat Res 162:153-163
-
(1986)
Mutat Res
, vol.162
, pp. 153-163
-
-
Hill-Perkins, M.1
Jones, M.D.2
Karran, P.3
-
15
-
-
0037154224
-
Archaeal dUTPase enhances PCR amplifications with archaeal DNA polymerases by preventing dUTP incorporation
-
Hogrefe HH, Hansen CJ, Scott BR, Nelson KB (2002) Archaeal dUTPase enhances PCR amplifications with archaeal DNA polymerases by preventing dUTP incorporation. Proc Natl Acad Sci U S A 99:596-601
-
(2002)
Proc Natl Acad Sci U S a
, vol.99
, pp. 596-601
-
-
Hogrefe, H.H.1
Hansen, C.J.2
Scott, B.R.3
Nelson, K.B.4
-
16
-
-
0035000622
-
Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean
-
Holden JF, Takai K, Summit M, Bolton S, Zyskowski J, Baross JA (2001) Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean. FEMS Microbiol Ecol 36:51-60
-
(2001)
FEMS Microbiol Ecol
, vol.36
, pp. 51-60
-
-
Holden, J.F.1
Takai, K.2
Summit, M.3
Bolton, S.4
Zyskowski, J.5
Baross, J.A.6
-
17
-
-
0025766848
-
Compilation and alignment of DNA polymerases
-
Ito J, Braithwaite DK (1991) Compilation and alignment of DNA polymerases. Nucleic Acids Res 19:4045-4057
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 4045-4057
-
-
Ito, J.1
Braithwaite, D.K.2
-
18
-
-
0019331557
-
Hypoxanthine in deoxyribonucleic acid: Generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus
-
Karran P, Lindahl T (1980) Hypoxanthine in deoxyribonucleic acid: generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus. Biochemistry 19:6005-6011
-
(1980)
Biochemistry
, vol.19
, pp. 6005-6011
-
-
Karran, P.1
Lindahl, T.2
-
19
-
-
34547987644
-
Cloning, purification, and characterization of a new DNA polymerase from a hyperthermophilic archaeon, Thermococcus sp. NA1
-
Kim YJ, Lee HS, Bae SS, Jeon JH, Lim JK, Cho Y, Nam KH, Kang SG, Kim SJ, Kwon ST, Lee JH (2007) Cloning, purification, and characterization of a new DNA polymerase from a hyperthermophilic archaeon, Thermococcus sp. NA1. J Microbiol Biotechnol 17:1090-1097
-
(2007)
J Microbiol Biotechnol
, vol.17
, pp. 1090-1097
-
-
Kim, Y.J.1
Lee, H.S.2
Bae, S.S.3
Jeon, J.H.4
Lim, J.K.5
Cho, Y.6
Nam, K.H.7
Kang, S.G.8
Kim, S.J.9
Kwon, S.T.10
Lee, J.H.11
-
20
-
-
0027391640
-
Characterization of a DNA polymerase from the hyperthermophile archaea Thermococcus litoralis. Vent DNA polymerase, steady state kinetics, thermal stability, processivity, strand displacement, and exonuclease activities
-
Kong H, Kucera RB, Jack WE (1993) Characterization of a DNA polymerase from the hyperthermophile archaea Thermococcus litoralis. Vent DNA polymerase, steady state kinetics, thermal stability, processivity, strand displacement, and exonuclease activities. J Biol Chem 268:1965-1975
-
(1993)
J Biol Chem
, vol.268
, pp. 1965-1975
-
-
Kong, H.1
Kucera, R.B.2
Jack, W.E.3
-
21
-
-
0036801346
-
Repair of deaminated bases in DNA
-
Kow YW (2002) Repair of deaminated bases in DNA. Free Radic Biol Med 33:886-893
-
(2002)
Free Radic Biol Med
, vol.33
, pp. 886-893
-
-
Kow, Y.W.1
-
22
-
-
0029929717
-
Archaebacterial DNA polymerases tightly bind uracil-containing DNA
-
Lasken RS, Schuster DM, Rashtchian A (1996) Archaebacterial DNA polymerases tightly bind uracil-containing DNA. J Biol Chem 271:17692-17696
-
(1996)
J Biol Chem
, vol.271
, pp. 17692-17696
-
-
Lasken, R.S.1
Schuster, D.M.2
Rashtchian, A.3
-
23
-
-
0016257644
-
Heat-induced deamination of cytosine residues in deoxyribonucleic acid
-
Lindahl T, Nyberg B (1974) Heat-induced deamination of cytosine residues in deoxyribonucleic acid. Biochemistry 13:3405-3410
-
(1974)
Biochemistry
, vol.13
, pp. 3405-3410
-
-
Lindahl, T.1
Nyberg, B.2
-
24
-
-
0018620965
-
DNA glycosylases, endonucleases for apurinic/apyrimidinic sites and base excision-repair
-
Lindahl T (1979) DNA glycosylases, endonucleases for apurinic/ apyrimidinic sites and base excision-repair. Prog Nucleic Acid Res Mol Biol 22:135-192
-
(1979)
Prog Nucleic Acid Res Mol Biol
, vol.22
, pp. 135-192
-
-
Lindahl, T.1
-
25
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
Lindahl T (1993) Instability and decay of the primary structure of DNA. Nature 362:709-715
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
26
-
-
0025788241
-
High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus
-
Lundberg KS, Shoemaker DD, Adams MW, Short JM, Sorge JA, Mathur EJ (1991) High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus. Gene 108:1-6
-
(1991)
Gene
, vol.108
, pp. 1-6
-
-
Lundberg, K.S.1
Shoemaker, D.D.2
Adams, M.W.3
Short, J.M.4
Sorge, J.A.5
Mathur, E.J.6
-
27
-
-
0025764762
-
Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase-an extremely heat stable enzyme with proofreading activity
-
Mattila P, Korpela J, Tenkanen T, Pitkanen K (1991) Fidelity of DNA synthesis by the Thermococcus litoralis DNA polymerase-an extremely heat stable enzyme with proofreading activity. Nucleic Acids Res 19:4967-4973
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 4967-4973
-
-
Mattila, P.1
Korpela, J.2
Tenkanen, T.3
Pitkanen, K.4
-
29
-
-
0003625509
-
-
Cold Spring Harbor Laboratory Cold Spring Harbor
-
Robb FT, Place AR, Sowers KR, Schreier HJ, DasSarma S, Fleischmann EM (1995) Archaea: a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, pp 3-29
-
(1995)
Archaea: A Laboratory Manual
, pp. 3-29
-
-
Robb, F.T.1
Place, A.R.2
Sowers, K.R.3
Schreier, H.J.4
Dassarma, S.5
Fleischmann, E.M.6
-
30
-
-
0023850178
-
Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase
-
Saiki RK, Gelfand DH, Stoffel S, Higuchi R, Horn G, Mullis KB, Erlich HA (1988) Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science 239:487-491
-
(1988)
Science
, vol.239
, pp. 487-491
-
-
Saiki, R.K.1
Gelfand, D.H.2
Stoffel, S.3
Higuchi, R.4
Horn, G.5
Mullis, K.B.6
Erlich, H.A.7
-
32
-
-
0034705405
-
Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus
-
Sandigursky M, Franklin WA (2000) Uracil-DNA glycosylase in the extreme thermophile Archaeoglobus fulgidus. J Biol Chem 275:19146-19149
-
(2000)
J Biol Chem
, vol.275
, pp. 19146-19149
-
-
Sandigursky, M.1
Franklin, W.A.2
-
33
-
-
0035839610
-
Biochemical characterization of uracil processing activities in the hyperthermophilic archaeon Pyrobaculum aerophilum
-
Sartori AA, Schar P, Fitz-Gibbon S, Miller JE, Jiriciny J (2001) Biochemical characterization of uracil processing activities in the hyperthermophilic archaeon Pyrobaculum aerophilum. J Biol Chem 276:29979-29986
-
(2001)
J Biol Chem
, vol.276
, pp. 29979-29986
-
-
Sartori, A.A.1
Schar, P.2
Fitz-Gibbon, S.3
Miller, J.E.4
Jiriciny, J.5
-
34
-
-
0014223593
-
The reaction of ribonucleotides with nitrous acid. Side products and kinetics
-
Shapiro R, Pohl SH (1968) The reaction of ribonucleotides with nitrous acid. Side products and kinetics. Biochemistry 7:448-455
-
(1968)
Biochemistry
, vol.7
, pp. 448-455
-
-
Shapiro, R.1
Pohl, S.H.2
-
35
-
-
1542358786
-
Recognition of the pro-mutagenic base uracil by family B DNA polymerases from archaea
-
Shuttleworth G, Fogg MJ, Kurpiewski MR, Jen-Jacobson L, Connolly BA (2004) Recognition of the pro-mutagenic base uracil by family B DNA polymerases from archaea. J Mol Biol 337:621-634
-
(2004)
J Mol Biol
, vol.337
, pp. 621-634
-
-
Shuttleworth, G.1
Fogg, M.J.2
Kurpiewski, M.R.3
Jen-Jacobson, L.4
Connolly, B.A.5
-
36
-
-
0030014622
-
Cloning of thermostable DNA polymerases from hyperthermophilic marine archaea with emphasis on Thermococcus sp. 9 degrees N-7 and mutations affecting 3¢-5¢ exonuclease activity
-
Southworth MW, Kong H, Kucera RB, Ware J, Jannasch HW, Perler FB (1996) Cloning of thermostable DNA polymerases from hyperthermophilic marine archaea with emphasis on Thermococcus sp. 9 degrees N-7 and mutations affecting 3′-5′ exonuclease activity. Proc Natl Acad Sci U S A 93:5281-5285
-
(1996)
Proc Natl Acad Sci U S a
, vol.93
, pp. 5281-5285
-
-
Southworth, M.W.1
Kong, H.2
Kucera, R.B.3
Ware, J.4
Jannasch, H.W.5
Perler, F.B.6
-
37
-
-
0030666190
-
Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR
-
Takagi M, Nishioka M, Kakihara H, Kitabayashi M, Inoue H, Kawakami B, Oka M, Imanaka T (1997) Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR. Appl Environ Microbiol 63:4504-4510
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4504-4510
-
-
Takagi, M.1
Nishioka, M.2
Kakihara, H.3
Kitabayashi, M.4
Inoue, H.5
Kawakami, B.6
Oka, M.7
Imanaka, T.8
-
38
-
-
0033951180
-
Characterization of a thermostable DNA glycosylase specific for U/G and T/G mismatches from the hyperthermophilic archaeon Pyrobaculum aerophilum
-
Yang H, Fitz-Gibbon S, Marcotte EM, Tai JH, Hyman EC, Miller JH (1999) Characterization of a thermostable DNA glycosylase specific for U/G and T/G mismatches from the hyperthermophilic archaeon Pyrobaculum aerophilum. J Bacteriol 182:1272-1279
-
(1999)
J Bacteriol
, vol.182
, pp. 1272-1279
-
-
Yang, H.1
Fitz-Gibbon, S.2
Marcotte, E.M.3
Tai, J.H.4
Hyman, E.C.5
Miller, J.H.6
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