-
1
-
-
0037085734
-
Heat-induced formation of reactive oxygen species and 8-oxoguanine, a biomarker of damage to DNA
-
Bruskov,V.I., Malakhova,L.V., Masalimov,Z.K. and Chernikov,A.V. (2002) Heat-induced formation of reactive oxygen species and 8-oxoguanine, a biomarker of damage to DNA. Nucleic Acids Res., 30, 1354-1363.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1354-1363
-
-
Bruskov, V.I.1
Malakhova, L.V.2
Masalimov, Z.K.3
Chernikov, A.V.4
-
2
-
-
0037124349
-
A novel uracil-DNA glycosylase with broad substrate specificity and an unusual active site
-
Sartori,A.A., Fitz-Gibbon,S., Yang,H., Miller,J.H. and Jiricny,J. (2002) A novel uracil-DNA glycosylase with broad substrate specificity and an unusual active site. EMBO J., 21, 3182-3191.
-
(2002)
EMBO J.
, vol.21
, pp. 3182-3191
-
-
Sartori, A.A.1
Fitz-Gibbon, S.2
Yang, H.3
Miller, J.H.4
Jiricny, J.5
-
3
-
-
0036894880
-
Structural basis for uracil recognition by archaeal family B DNA polymerases
-
Fogg,M.J., Pearl,L.H. and Connolly,B.A. (2002) Structural basis for uracil recognition by archaeal family B DNA polymerases. Nature Struct. Biol., 9, 922-927.
-
(2002)
Nature Struct. Biol.
, vol.9
, pp. 922-927
-
-
Fogg, M.J.1
Pearl, L.H.2
Connolly, B.A.3
-
4
-
-
0001169285
-
Identification of a DinB/UmuC homolog in the archeon Sulfolobus solfataricus
-
Kulaeva,O.I., Koonin,E.V., McDonald,J.P., Randall,S.K., Rabinovich,N., Connaughton,J.F., Levine,A.S. and Woodgate,R. (1996) Identification of a DinB/UmuC homolog in the archeon Sulfolobus solfataricus. Mutat. Res., 357, 245-253.
-
(1996)
Mutat. Res.
, vol.357
, pp. 245-253
-
-
Kulaeva, O.I.1
Koonin, E.V.2
McDonald, J.P.3
Randall, S.K.4
Rabinovich, N.5
Connaughton, J.F.6
Levine, A.S.7
Woodgate, R.8
-
5
-
-
0035861667
-
Synthetic activity of Sso DNA polymerase Y1, an archaeal DinB-like DNA polymerase, is stimulated by processivity factors proliferating cell nuclear antigen and replication factor C
-
Gruz,P., Pisani,F.M., Shimizu,M., Yamada,M., Hayashi,I., Morikawa,K. and Nohmi,T. (2001) Synthetic activity of Sso DNA polymerase Y1, an archaeal DinB-like DNA polymerase, is stimulated by processivity factors proliferating cell nuclear antigen and replication factor C. J. Biol. Chem., 276, 47394-47401.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 47394-47401
-
-
Gruz, P.1
Pisani, F.M.2
Shimizu, M.3
Yamada, M.4
Hayashi, I.5
Morikawa, K.6
Nohmi, T.7
-
6
-
-
0036682979
-
Translesion DNA synthesis in eukaryotes: A one- or two-polymerase affair
-
Prakash,S. and Prakash,L. (2002) Translesion DNA synthesis in eukaryotes: a one- or two-polymerase affair. Genes Dev., 16, 1872-1883.
-
(2002)
Genes Dev.
, vol.16
, pp. 1872-1883
-
-
Prakash, S.1
Prakash, L.2
-
7
-
-
17944380943
-
The Y-family of DNA polymerases
-
Ohmori,H., Friedberg,E.C., Fuchs,R.P.P., Goodman,M.F., Hanaoka,F., Hinkle,D.C., Kunkel,T.A., Lawrence,C.W., Livneh,Z., Nohmi,T. et al. (2001) The Y-family of DNA polymerases. Mol. Cell, 8, 1-20.
-
(2001)
Mol. Cell
, vol.8
, pp. 1-20
-
-
Ohmori, H.1
Friedberg, E.C.2
Fuchs, R.P.P.3
Goodman, M.F.4
Hanaoka, F.5
Hinkle, D.C.6
Kunkel, T.A.7
Lawrence, C.W.8
Livneh, Z.9
Nohmi, T.10
-
8
-
-
0035812849
-
Crystal structure of a Y-family DNA polymerase in action: A mechanism for error-prone and lesion-bypass replication
-
Ling,H., Boudsocq,F., Woodgate,R. and Yang,W. (2001) Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication. Cell, 107, 91-102.
-
(2001)
Cell
, vol.107
, pp. 91-102
-
-
Ling, H.1
Boudsocq, F.2
Woodgate, R.3
Yang, W.4
-
9
-
-
0034762679
-
Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus
-
Silvian,L.F., Toth,E.A., Pham,P., Goodman,M.F. and Ellenberger,T. (2001) Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus. Nature Struct. Biol., 8, 984-989.
-
(2001)
Nature Struct. Biol.
, vol.8
, pp. 984-989
-
-
Silvian, L.F.1
Toth, E.A.2
Pham, P.3
Goodman, M.F.4
Ellenberger, T.5
-
10
-
-
0034857266
-
Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain
-
Zhou,B.L., Pata,J.D. and Steitz,T.A. (2001) Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain. Mol. Cell, 8, 427-437.
-
(2001)
Mol. Cell
, vol.8
, pp. 427-437
-
-
Zhou, B.L.1
Pata, J.D.2
Steitz, T.A.3
-
11
-
-
0037205402
-
Low fidelity DNA synthesis by a y family DNA polymerase due to misalignment in the active site
-
Kokoska,R.J., Bebenek,K., Boudsocq,F., Woodgate,R. and Kunkel,T.A. (2002) Low fidelity DNA synthesis by a y family DNA polymerase due to misalignment in the active site. J. Biol. Chem., 277, 19633-19638.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 19633-19638
-
-
Kokoska, R.J.1
Bebenek, K.2
Boudsocq, F.3
Woodgate, R.4
Kunkel, T.A.5
-
12
-
-
0037008746
-
The mutational specificity of the Dbh lesion bypass polymerase and its implications
-
Potapova,O., Grindley,N.D. and Joyce,C.M. (2002) The mutational specificity of the Dbh lesion bypass polymerase and its implications. J. Biol. Chem., 277, 28157-28166.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 28157-28166
-
-
Potapova, O.1
Grindley, N.D.2
Joyce, C.M.3
-
13
-
-
0033529945
-
A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil
-
Greagg,M.A., Fogg,M.J., Panayotou,G., Evans,S.J., Connolly,B.A. and Pearl,L.H. (1999) A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil. Proc. Natl Acad. Sci. USA, 96, 9045-9050.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 9045-9050
-
-
Greagg, M.A.1
Fogg, M.J.2
Panayotou, G.3
Evans, S.J.4
Connolly, B.A.5
Pearl, L.H.6
-
14
-
-
0032552893
-
Amino acid residues involved in determining the processivity of the 3′-5′ exonuclease activity in a family B DNA polymerase from the thermoacidophilic archaeon Sulfolobus solfataricus
-
Pisani,F.M., De Felice,M. and Rossi,M. (1998) Amino acid residues involved in determining the processivity of the 3′-5′ exonuclease activity in a family B DNA polymerase from the thermoacidophilic archaeon Sulfolobus solfataricus. Biochemistry, 37, 15005-15012.
-
(1998)
Biochemistry
, vol.37
, pp. 15005-15012
-
-
Pisani, F.M.1
De Felice, M.2
Rossi, M.3
-
15
-
-
0037368828
-
Erroneous incorporation of oxidized DNA precursors by Y-family DNA polymerases
-
Shimizu,M., Gruz,P., Kamiya,H., Kim,S.R., Pisani,F.M., Masutani,C., Kanke,Y., Harashima,H., Hanaoka,F. and Nohmi,T. (2003) Erroneous incorporation of oxidized DNA precursors by Y-family DNA polymerases. EMBO Rep., 4, 269-273.
-
(2003)
EMBO Rep.
, vol.4
, pp. 269-273
-
-
Shimizu, M.1
Gruz, P.2
Kamiya, H.3
Kim, S.R.4
Pisani, F.M.5
Masutani, C.6
Kanke, Y.7
Harashima, H.8
Hanaoka, F.9
Nohmi, T.10
-
16
-
-
0015275944
-
Sulfolobus: A new genus of sulfur-oxidizing bacteria living at low pH and high temperature
-
Brock,T.D., Brock,K.M., Belly,R.T. and Weiss,R.L. (1972) Sulfolobus: a new genus of sulfur-oxidizing bacteria living at low pH and high temperature. Arch. Mikrobiol., 84, 54-68.
-
(1972)
Arch. Mikrobiol.
, vol.84
, pp. 54-68
-
-
Brock, T.D.1
Brock, K.M.2
Belly, R.T.3
Weiss, R.L.4
-
17
-
-
0035890599
-
Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): An archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta
-
Boudsocq,F., Iwai,S., Hanaoka,F. and Woodgate,R. (2001) Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta. Nucleic Acids Res., 29, 4607-4616.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 4607-4616
-
-
Boudsocq, F.1
Iwai, S.2
Hanaoka, F.3
Woodgate, R.4
-
18
-
-
0037018846
-
The mammalian mismatch repair pathway removes DNA 8-oxodGMP incorporated from the oxidized dNTP pool
-
Colussi,C., Parlanti,E., Degan,P., Aquilina,G., Barnes,D., Macpherson,P., Karran,P., Crescenzi,M., Dogliotti,E. and Bignami,M. (2002) The mammalian mismatch repair pathway removes DNA 8-oxodGMP incorporated from the oxidized dNTP pool. Curr. Biol., 12, 912-919.
-
(2002)
Curr. Biol.
, vol.12
, pp. 912-919
-
-
Colussi, C.1
Parlanti, E.2
Degan, P.3
Aquilina, G.4
Barnes, D.5
Macpherson, P.6
Karran, P.7
Crescenzi, M.8
Dogliotti, E.9
Bignami, M.10
-
19
-
-
0033636312
-
Uracil-DNA glycosylase (UNG)-deficient mice reveal a primary role of the enzyme during DNA replication
-
Nilsen,H., Rosewell,I., Robins,P., Skjelbred,C.F., Andersen,S., Slupphaug,G., Daly,G., Krokan,H.E., Lindahl,T. and Barnes,D.E. (2000) Uracil-DNA glycosylase (UNG)-deficient mice reveal a primary role of the enzyme during DNA replication. Mol. Cell, 5, 1059-1065.
-
(2000)
Mol. Cell
, vol.5
, pp. 1059-1065
-
-
Nilsen, H.1
Rosewell, I.2
Robins, P.3
Skjelbred, C.F.4
Andersen, S.5
Slupphaug, G.6
Daly, G.7
Krokan, H.E.8
Lindahl, T.9
Barnes, D.E.10
-
20
-
-
0029929717
-
Archaebacterial DNA polymerases tightly bind uracil-containing DNA
-
Lasken,R.S., Schuster,D.M. and Rashtchian,A. (1996) Archaebacterial DNA polymerases tightly bind uracil-containing DNA. J. Biol. Chem., 271, 17692-17696.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 17692-17696
-
-
Lasken, R.S.1
Schuster, D.M.2
Rashtchian, A.3
-
21
-
-
0003890119
-
Prokaryotic DNA polymerases other than E. coli Pol I
-
W.H. Freeman and Co., New York, NY
-
Kornberg,A. and Baker,T.A. (1992) Prokaryotic DNA polymerases other than E. coli Pol I. In DNA Replication. W.H. Freeman and Co., New York, NY, pp. 165-196.
-
(1992)
DNA Replication
, pp. 165-196
-
-
Kornberg, A.1
Baker, T.A.2
-
22
-
-
0034789619
-
Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli
-
Kim,S.R., Matsui,K., Yamada,M., Gruz,P. and Nohmi,T. (2001) Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli. Mol. Genet. Genomics, 266, 207-215.
-
(2001)
Mol. Genet. Genomics
, vol.266
, pp. 207-215
-
-
Kim, S.R.1
Matsui, K.2
Yamada, M.3
Gruz, P.4
Nohmi, T.5
-
23
-
-
0034425754
-
Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta
-
Haracska,L., Yu,S.L., Johnson,R.E., Prakash,L. and Prakash,S. (2000) Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta. Nature Genet., 25, 458-461.
-
(2000)
Nature Genet.
, vol.25
, pp. 458-461
-
-
Haracska, L.1
Yu, S.L.2
Johnson, R.E.3
Prakash, L.4
Prakash, S.5
-
24
-
-
0034556629
-
Error-prone lesion bypass by human DNA polymerase eta
-
Zhang,Y., Yuan,F., Wu,X., Rechkoblit,O., Taylor,J.S., Geacintov,N.E. and Wang,Z. (2000) Error-prone lesion bypass by human DNA polymerase eta. Nucleic Acids Res., 28, 4717-4724.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4717-4724
-
-
Zhang, Y.1
Yuan, F.2
Wu, X.3
Rechkoblit, O.4
Taylor, J.S.5
Geacintov, N.E.6
Wang, Z.7
-
25
-
-
0034327408
-
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro
-
Zhang,Y., Yuan,F., Wu,X., Wang,M., Rechkoblit,O., Taylor,J.S., Geacintov,N.E. and Wang,Z. (2000) Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro. Nucleic Acids Res., 28, 4138-4146.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4138-4146
-
-
Zhang, Y.1
Yuan, F.2
Wu, X.3
Wang, M.4
Rechkoblit, O.5
Taylor, J.S.6
Geacintov, N.E.7
Wang, Z.8
-
26
-
-
0034744964
-
Homotrimeric dUTPases; structural solutions for specific recognition and hydrolysis of dUTP
-
Persson,R., Cedergren-Zeppezauer,E.S. and Wilson,K.S. (2001) Homotrimeric dUTPases; structural solutions for specific recognition and hydrolysis of dUTP. Curr. Protein Pept. Sci., 2, 287-300.
-
(2001)
Curr. Protein Pept. Sci.
, vol.2
, pp. 287-300
-
-
Persson, R.1
Cedergren-Zeppezauer, E.S.2
Wilson, K.S.3
-
27
-
-
0036023039
-
Identification of the dITP- and XTP-hydrolyzing protein from Escherichia coli
-
Chung,J.H., Park,H.Y., Lee,J.H. and Jang,Y. (2002) Identification of the dITP- and XTP-hydrolyzing protein from Escherichia coli. J. Biochem. Mol. Biol., 35, 403-408.
-
(2002)
J. Biochem. Mol. Biol.
, vol.35
, pp. 403-408
-
-
Chung, J.H.1
Park, H.Y.2
Lee, J.H.3
Jang, Y.4
-
28
-
-
0035879027
-
Biochemical characterization of a novel hypoxanthine/xanthine dNTP pyrophosphatase from Methanococcus jannaschii
-
Chung,J.H., Back,J.H., Park,Y.I. and Han,Y.S. (2001) Biochemical characterization of a novel hypoxanthine/xanthine dNTP pyrophosphatase from Methanococcus jannaschii. Nucleic Acids Res., 29, 3099-3107.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 3099-3107
-
-
Chung, J.H.1
Back, J.H.2
Park, Y.I.3
Han, Y.S.4
-
29
-
-
0035379753
-
Cloning, expression, and characterization of a human inosine triphosphate pyrophosphatase encoded by the itpa gene
-
Lin,S., McLennan,A.G., Ying,K., Wang,Z., Gu,S., Jin,H., Wu,C., Liu,W., Yuan,Y., Tang,R. et al. (2001) Cloning, expression, and characterization of a human inosine triphosphate pyrophosphatase encoded by the itpa gene. J. Biol. Chem., 276, 18695-18701.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 18695-18701
-
-
Lin, S.1
McLennan, A.G.2
Ying, K.3
Wang, Z.4
Gu, S.5
Jin, H.6
Wu, C.7
Liu, W.8
Yuan, Y.9
Tang, R.10
-
30
-
-
0027521347
-
PCR with degenerate primers containing deoxyinosine fails with Pfu DNA polymerase
-
Knittel,T. and Picard,D. (1993) PCR with degenerate primers containing deoxyinosine fails with Pfu DNA polymerase. PCR Methods Appl., 2, 346-347.
-
(1993)
PCR Methods Appl.
, vol.2
, pp. 346-347
-
-
Knittel, T.1
Picard, D.2
|