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Volumn 25, Issue 1, 2008, Pages 55-67

Space and time-resolved gene expression experiments on cultured mammalian cells by a single-cell electroporation microarray

Author keywords

[No Author keywords available]

Indexed keywords

CELL CULTURE; DNA; MAMMALS; MICROARRAYS; OLIGONUCLEOTIDES; RNA;

EID: 44049097920     PISSN: 18716784     EISSN: 18764347     Source Type: Journal    
DOI: 10.1016/j.nbt.2008.03.002     Document Type: Article
Times cited : (25)

References (48)
  • 1
    • 25444468618 scopus 로고    scopus 로고
    • Noise in gene expression: origins, consequences, and control
    • J.M. Raser E.K. O'Shea Noise in gene expression: origins, consequences, and control Science 309 2005 2010 2013
    • (2005) Science , vol.309 , pp. 2010-2013
    • Raser, J.M.1    O'Shea, E.K.2
  • 2
    • 15544371346 scopus 로고    scopus 로고
    • Gene regulation at the single-cell level
    • N. Rosenfeld Gene regulation at the single-cell level Science 307 2005 1962 1965
    • (2005) Science , vol.307 , pp. 1962-1965
    • Rosenfeld, N.1
  • 3
    • 33846097600 scopus 로고    scopus 로고
    • Dynamics of single-cell gene expression
    • D. Longo J. Hasty Dynamics of single-cell gene expression Mol. Syst. Biol. 2 2006 64
    • (2006) Mol. Syst. Biol. , vol.2 , pp. 64
    • Longo, D.1    Hasty, J.2
  • 4
    • 0842332406 scopus 로고    scopus 로고
    • Dynamics of the p53-Mdm2 feedback loop in individual cells
    • G. Lahav Dynamics of the p53-Mdm2 feedback loop in individual cells Nat. Genet. 36 2004 147 150
    • (2004) Nat. Genet. , vol.36 , pp. 147-150
    • Lahav, G.1
  • 5
    • 7444254365 scopus 로고    scopus 로고
    • Oscillations in NF-kappaB signaling control the dynamics of gene expression
    • D.E. Nelson Oscillations in NF-kappaB signaling control the dynamics of gene expression Science 306 2004 704 708
    • (2004) Science , vol.306 , pp. 704-708
    • Nelson, D.E.1
  • 6
    • 6344291988 scopus 로고    scopus 로고
    • Quantification of multiple gene expression in individual cells
    • A. Peixioto Quantification of multiple gene expression in individual cells Genome Res. 14 2004 1938 1947
    • (2004) Genome Res. , vol.14 , pp. 1938-1947
    • Peixioto, A.1
  • 7
    • 1942455914 scopus 로고    scopus 로고
    • Single neurons as experimental systems in molecular biology
    • D. Hinkle Single neurons as experimental systems in molecular biology Progr. Neurobiol. 72 2004 129 142
    • (2004) Progr. Neurobiol. , vol.72 , pp. 129-142
    • Hinkle, D.1
  • 8
    • 33645027986 scopus 로고    scopus 로고
    • Stochastic protein expression in individual cells at the single-molecule level
    • L. Cai Stochastic protein expression in individual cells at the single-molecule level Nature 440 2006 358 362
    • (2006) Nature , vol.440 , pp. 358-362
    • Cai, L.1
  • 9
    • 33645798851 scopus 로고    scopus 로고
    • The fluorescent toolbox for assessing protein location and function
    • B.N.G. Giepmans The fluorescent toolbox for assessing protein location and function Science 312 2006 217 224
    • (2006) Science , vol.312 , pp. 217-224
    • Giepmans, B.N.G.1
  • 10
    • 33846110291 scopus 로고    scopus 로고
    • Imaging single molecules in living cells for systems biology
    • Y. Sako Imaging single molecules in living cells for systems biology Mol. Syst. Biol. 1 2006 56
    • (2006) Mol. Syst. Biol. , vol.1 , pp. 56
    • Sako, Y.1
  • 11
    • 33747615285 scopus 로고    scopus 로고
    • Gene expression within a dynamic nuclear landscape
    • Y. Shav-Tal Gene expression within a dynamic nuclear landscape EMBO J. 25 2006 3469 3479
    • (2006) EMBO J. , vol.25 , pp. 3469-3479
    • Shav-Tal, Y.1
  • 12
    • 33645825831 scopus 로고    scopus 로고
    • Living cells as test tubes
    • X.S. Xie Living cells as test tubes Science 312 2006 228 230
    • (2006) Science , vol.312 , pp. 228-230
    • Xie, X.S.1
  • 13
    • 27844483847 scopus 로고    scopus 로고
    • RNA amplification strategies for small sample populations
    • S.D. Gingsberg RNA amplification strategies for small sample populations Methods 37 2005 229 237
    • (2005) Methods , vol.37 , pp. 229-237
    • Gingsberg, S.D.1
  • 14
    • 33845629055 scopus 로고    scopus 로고
    • Gene expression profiling of single cells on large-scale oligonucleotide arrays
    • C.H. Hartmann C.A. Klein Gene expression profiling of single cells on large-scale oligonucleotide arrays Nucleic Acids Res. 34 2006 e143
    • (2006) Nucleic Acids Res. , vol.34 , pp. e143
    • Hartmann, C.H.1    Klein, C.A.2
  • 15
    • 31344457652 scopus 로고    scopus 로고
    • Micro-separation toward systems biology
    • B.-F. Liu Micro-separation toward systems biology J. Chromatogr. A 1106 2006 19 28
    • (2006) J. Chromatogr. A , vol.1106 , pp. 19-28
    • Liu, B.-F.1
  • 16
    • 19644380361 scopus 로고    scopus 로고
    • Subcellular localization as a limiting factor for utilization of decoy oligonucleotides
    • A. Bene Subcellular localization as a limiting factor for utilization of decoy oligonucleotides Nucleic Acids Res. 32 2004 e142
    • (2004) Nucleic Acids Res. , vol.32 , pp. e142
    • Bene, A.1
  • 17
    • 18944373328 scopus 로고    scopus 로고
    • Highly efficient endogenous human gene correction using designed zinc-finger nucleases
    • F.D. Urnov Highly efficient endogenous human gene correction using designed zinc-finger nucleases Nature 435 2005 646 651
    • (2005) Nature , vol.435 , pp. 646-651
    • Urnov, F.D.1
  • 18
    • 23444441147 scopus 로고    scopus 로고
    • Gene targeting using zinc finger nucleases
    • M.H. Porteus D. Carroll Gene targeting using zinc finger nucleases Nat. Biotechnol. 23 2005 967 973
    • (2005) Nat. Biotechnol. , vol.23 , pp. 967-973
    • Porteus, M.H.1    Carroll, D.2
  • 19
    • 27744530147 scopus 로고    scopus 로고
    • Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells
    • S. Durai Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells Nucleic Acids Res. 33 2005 5978 5990
    • (2005) Nucleic Acids Res. , vol.33 , pp. 5978-5990
    • Durai, S.1
  • 20
    • 0037383050 scopus 로고    scopus 로고
    • Electroporation, theory and methods, perspectives for drug delivery, gene therapy and research
    • J. Gehl Electroporation, theory and methods, perspectives for drug delivery, gene therapy and research Acta Physiol. Scand. 177 2003 437 447
    • (2003) Acta Physiol. Scand. , vol.177 , pp. 437-447
    • Gehl, J.1
  • 21
    • 13644263239 scopus 로고    scopus 로고
    • Transfection techniques affecting Stat3 activity levels
    • R. Arulanandam Transfection techniques affecting Stat3 activity levels Anal. Biochem. 338 2005 83 89
    • (2005) Anal. Biochem. , vol.338 , pp. 83-89
    • Arulanandam, R.1
  • 22
    • 0037309122 scopus 로고    scopus 로고
    • Single-cell electroporation
    • J. Olofsson Single-cell electroporation Curr. Opin. Biotechnol. 14 2003 29 34
    • (2003) Curr. Opin. Biotechnol. , vol.14 , pp. 29-34
    • Olofsson, J.1
  • 23
    • 0000897545 scopus 로고
    • Introduction to the theory, design and modeling of thin-film microelectrodes for neural interfaces
    • G. Kovacs Introduction to the theory, design and modeling of thin-film microelectrodes for neural interfaces D.A. Stenger T. McKenna Enabling Technologies for Cultured Neural Networks 1994 Academic Press 121 166
    • (1994) , pp. 121-166
    • Kovacs, G.1
  • 24
    • 0035859929 scopus 로고    scopus 로고
    • Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems
    • N.G. Caplen Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems Proc. Natl. Acad. Sci. 98 2001 9742 9747
    • (2001) Proc. Natl. Acad. Sci. , vol.98 , pp. 9742-9747
    • Caplen, N.G.1
  • 25
    • 33646179568 scopus 로고    scopus 로고
    • The extracellular electrical resistivity in cell adhesion
    • R. Gleixner P. Fromherz The extracellular electrical resistivity in cell adhesion Biophys. J. 90 2006 2600 2611
    • (2006) Biophys. J. , vol.90 , pp. 2600-2611
    • Gleixner, R.1    Fromherz, P.2
  • 26
    • 85119766377 scopus 로고    scopus 로고
    • Electrical modeling of a biochip for genetic manipulation of single cells
    • L. Bandiera Electrical modeling of a biochip for genetic manipulation of single cells IEDM Proc. 2006 723 726
    • (2006) IEDM Proc. , pp. 723-726
    • Bandiera, L.1
  • 27
    • 0027243695 scopus 로고
    • Monitoring electropermeabilization in the plasma membrane of adherent mammalian cells
    • P.M. Ghosh Monitoring electropermeabilization in the plasma membrane of adherent mammalian cells Biophys. J. 64 1993 1602 1609
    • (1993) Biophys. J. , vol.64 , pp. 1602-1609
    • Ghosh, P.M.1
  • 28
    • 0033029097 scopus 로고    scopus 로고
    • Fundamentals of electroporative delivery of drugs and genes
    • E. Neumann Fundamentals of electroporative delivery of drugs and genes Bioelectrochem. Bioenerg. 48 1999 3 16
    • (1999) Bioelectrochem. Bioenerg. , vol.48 , pp. 3-16
    • Neumann, E.1
  • 29
    • 2142763965 scopus 로고    scopus 로고
    • Model for creation and evolution of stable electropores for DNA delivery
    • K.C. Smith Model for creation and evolution of stable electropores for DNA delivery Biophys. J. 86 2004 2813 2826
    • (2004) Biophys. J. , vol.86 , pp. 2813-2826
    • Smith, K.C.1
  • 30
    • 0043207553 scopus 로고    scopus 로고
    • Role of pulse shape in cell membrane electropermeabilization
    • A. Kotnic Role of pulse shape in cell membrane electropermeabilization Biochim. Biophys. Acta 1614 2003 193 200
    • (2003) Biochim. Biophys. Acta , vol.1614 , pp. 193-200
    • Kotnic, A.1
  • 31
    • 0031832897 scopus 로고    scopus 로고
    • Control by osmotic pressure by voltage-induced permeabilization and gene transfer in mammalian cells
    • M. Golzio Control by osmotic pressure by voltage-induced permeabilization and gene transfer in mammalian cells Biophys. J. 74 1998 3015 3022
    • (1998) Biophys. J. , vol.74 , pp. 3015-3022
    • Golzio, M.1
  • 32
    • 0035090622 scopus 로고    scopus 로고
    • Improved intracellular delivery of oligonucleotides by square wave electroporatioin
    • Y. Liu R. Bergan Improved intracellular delivery of oligonucleotides by square wave electroporatioin Antisense Nucleic Acid Drug Dev. 11 2001 7 14
    • (2001) Antisense Nucleic Acid Drug Dev. , vol.11 , pp. 7-14
    • Liu, Y.1    Bergan, R.2
  • 33
    • 0348014774 scopus 로고    scopus 로고
    • Approaches for sequence-specific knockdown of mRNA
    • L.J. Scherer J.J. Rossi Approaches for sequence-specific knockdown of mRNA Nat. Biotechnol. 21 2003 1457 1465
    • (2003) Nat. Biotechnol. , vol.21 , pp. 1457-1465
    • Scherer, L.J.1    Rossi, J.J.2
  • 34
    • 0035799654 scopus 로고    scopus 로고
    • Microarrays of cells expressing defined cDNAs
    • J. Ziauddin D.M. Sabatini Microarrays of cells expressing defined cDNAs Nature 411 2001 107 110
    • (2001) Nature , vol.411 , pp. 107-110
    • Ziauddin, J.1    Sabatini, D.M.2
  • 35
    • 2442676790 scopus 로고    scopus 로고
    • Quantitative analysis of highly parallel transfection in cell microarrays
    • S. Baghdoyan Quantitative analysis of highly parallel transfection in cell microarrays Nucleic Acids Res. 32 2004 e77
    • (2004) Nucleic Acids Res. , vol.32 , pp. e77
    • Baghdoyan, S.1
  • 36
    • 2342593280 scopus 로고    scopus 로고
    • Surfection: a new platform for transfected cell arrays
    • F.-H. Chang Surfection: a new platform for transfected cell arrays Nucleic Acids Res. 32 2004 e33
    • (2004) Nucleic Acids Res. , vol.32 , pp. e33
    • Chang, F.-H.1
  • 37
    • 16544375980 scopus 로고    scopus 로고
    • Spatially and temporally controlled gene transfer by electroporation into adherent cells on plasmid DNA-loaded electrodes
    • F. Yamauchi Spatially and temporally controlled gene transfer by electroporation into adherent cells on plasmid DNA-loaded electrodes Nucleic Acids Res. 32 2004 e187
    • (2004) Nucleic Acids Res. , vol.32 , pp. e187
    • Yamauchi, F.1
  • 38
    • 24644468152 scopus 로고    scopus 로고
    • Violet diode-assisted photoporation and transfection of cells
    • L. Paterson Violet diode-assisted photoporation and transfection of cells Biopharm. Int. 18 2005 30 35
    • (2005) Biopharm. Int. , vol.18 , pp. 30-35
    • Paterson, L.1
  • 39
    • 33747116681 scopus 로고    scopus 로고
    • Cells on chips
    • J. El-Ali Cells on chips Nature 442 2006 403 411
    • (2006) Nature , vol.442 , pp. 403-411
    • El-Ali, J.1
  • 40
    • 0036403701 scopus 로고    scopus 로고
    • Selective electrical interfaces with the nervous system
    • W.L.C. Rutten Selective electrical interfaces with the nervous system Annu. Rev. Biomed. Eng. 4 2002 407 452
    • (2002) Annu. Rev. Biomed. Eng. , vol.4 , pp. 407-452
    • Rutten, W.L.C.1
  • 41
    • 0036066860 scopus 로고    scopus 로고
    • Coordination of mesangial cell contraction by gap junction-mediated intercellular Ca2+ wave
    • 2+ wave J. Am. Soc. Nephrol. 13 2002 2018 2026
    • (2002) J. Am. Soc. Nephrol. , vol.13 , pp. 2018-2026
    • Yao, J.1
  • 42
    • 33645464806 scopus 로고    scopus 로고
    • Cellular imaging in drug discovery
    • P. Lang Cellular imaging in drug discovery Nat. Rev. Drug Discov. 5 2006 343 356
    • (2006) Nat. Rev. Drug Discov. , vol.5 , pp. 343-356
    • Lang, P.1
  • 43
    • 33746511505 scopus 로고    scopus 로고
    • High content cellular screening
    • O. Rausch High content cellular screening Curr. Opin. Chem. Biol. 10 2006 1 5
    • (2006) Curr. Opin. Chem. Biol. , vol.10 , pp. 1-5
    • Rausch, O.1
  • 44
    • 1242328745 scopus 로고    scopus 로고
    • Microtechnologies and nanotechnologies for single-cell analysis
    • H. Andersson A. van den Berg Microtechnologies and nanotechnologies for single-cell analysis Curr. Op. Biotechnol. 15 2004 44 49
    • (2004) Curr. Op. Biotechnol. , vol.15 , pp. 44-49
    • Andersson, H.1    van den Berg, A.2
  • 45
    • 33644519040 scopus 로고    scopus 로고
    • Building mammalian signaling pathways with RNAi screens
    • J. Moffat D.M. Sabatini Building mammalian signaling pathways with RNAi screens Nat. Rev. Mol. Cell. Biol. 7 2006 177 187
    • (2006) Nat. Rev. Mol. Cell. Biol. , vol.7 , pp. 177-187
    • Moffat, J.1    Sabatini, D.M.2
  • 46
    • 28444484636 scopus 로고    scopus 로고
    • Aptamers-basic research, drug development, and clinical applications
    • D. Proske Aptamers-basic research, drug development, and clinical applications Appl. Microbiol. Biotechnol. 69 2005 367 374
    • (2005) Appl. Microbiol. Biotechnol. , vol.69 , pp. 367-374
    • Proske, D.1
  • 47
    • 8344271026 scopus 로고    scopus 로고
    • Production of recombinant protein therapeutics in cultivated mammalian cells
    • M. Wurm Production of recombinant protein therapeutics in cultivated mammalian cells Nat. Biotech. 22 2004 1393 1398
    • (2004) Nat. Biotech. , vol.22 , pp. 1393-1398
    • Wurm, M.1
  • 48
    • 22444445110 scopus 로고    scopus 로고
    • Stable transmission of targeted gene modification using single-stranded oligonucleotides with flanking LNAs
    • C. Andrieu-Soler Stable transmission of targeted gene modification using single-stranded oligonucleotides with flanking LNAs Nucleic Acids Res. 33 2005 3733 3742
    • (2005) Nucleic Acids Res. , vol.33 , pp. 3733-3742
    • Andrieu-Soler, C.1


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