-
1
-
-
0027409404
-
A player of many parts: The spotlight falls on thrombin's structure
-
Stubbs, M.T. & Bode, W. A player of many parts: the spotlight falls on thrombin's structure. Thromb. Res. 69, 1-58 (1993).
-
(1993)
Thromb. Res.
, vol.69
, pp. 1-58
-
-
Stubbs, M.T.1
Bode, W.2
-
2
-
-
0028912561
-
The clot thickens: Clues provided by thrombin structure
-
Stubbs, M.T. & Bode, W. The clot thickens: clues provided by thrombin structure. Trends Biochem. Sci. 20, 23-28 (1995).
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 23-28
-
-
Stubbs, M.T.1
Bode, W.2
-
3
-
-
0141609849
-
Mechanisms of glycosaminoglycan activation of the serpins in hemostasis
-
Huntington, J.A. Mechanisms of glycosaminoglycan activation of the serpins in hemostasis. J. Thromb. Haemost. 1, 1535-1549 (2003).
-
(2003)
J. Thromb. Haemost.
, vol.1
, pp. 1535-1549
-
-
Huntington, J.A.1
-
4
-
-
0019364061
-
Blood tests for the diagnosis of venous and arterial thrombosis
-
Hirsh, J. Blood tests for the diagnosis of venous and arterial thrombosis. Blood 57, 1-8 (1981).
-
(1981)
Blood
, vol.57
, pp. 1-8
-
-
Hirsh, J.1
-
5
-
-
1842833302
-
Targeted gene disruption of natural anticoagulant proteins in mice
-
Kojima, T. Targeted gene disruption of natural anticoagulant proteins in mice. Int. J. Hematol. 76 (suppl. 2), 36-39 (2002).
-
(2002)
Int. J. Hematol.
, vol.76
, Issue.SUPPL. 2
, pp. 36-39
-
-
Kojima, T.1
-
6
-
-
0035443891
-
Order out of complexity-protein structures that interact with heparin
-
Mulloy, B. & Linhardt, R.J. Order out of complexity-protein structures that interact with heparin. Curr. Opin. Struct. Biol. 11, 623-628 (2001).
-
(2001)
Curr. Opin. Struct. Biol.
, vol.11
, pp. 623-628
-
-
Mulloy, B.1
Linhardt, R.J.2
-
7
-
-
0019832585
-
The antithrombin-binding sequence of heparin
-
Lindahl, U., Thunberg, L., Backstrom, G. & Riesenfeld, J. The antithrombin-binding sequence of heparin. Biochem. Soc. Trans. 9, 499-451 (1981).
-
(1981)
Biochem. Soc. Trans.
, vol.9
, pp. 499-451
-
-
Lindahl, U.1
Thunberg, L.2
Backstrom, G.3
Riesenfeld, J.4
-
8
-
-
0019801543
-
The structure of heparin oligosaccharide fragments with high anti-(factor Xa) activity containing the minimal antithrombin III-binding sequence. Chemical and 13C nuclear-magnetic-resonance studies
-
Casu, B. et al. The structure of heparin oligosaccharide fragments with high anti-(factor Xa) activity containing the minimal antithrombin III-binding sequence. Chemical and 13C nuclear-magnetic-resonance studies. Biochem. J. 197, 599-609 (1981).
-
(1981)
Biochem. J.
, vol.197
, pp. 599-609
-
-
Casu, B.1
-
9
-
-
0017919634
-
Heparin, antithrombin, and abnormal clotting
-
Rosenberg, R.D. Heparin, antithrombin, and abnormal clotting. Annu. Rev. Med. 29, 367-378 (1978).
-
(1978)
Annu. Rev. Med.
, vol.29
, pp. 367-378
-
-
Rosenberg, R.D.1
-
10
-
-
0036872229
-
Heparin activates antithrombin anticoagulant function by generating new interaction sites (exosites) for blood clotting proteinases
-
Olson, S.J. & Chuang, Y.J. Heparin activates antithrombin anticoagulant function by generating new interaction sites (exosites) for blood clotting proteinases. Trends Cardiovasc. Med. 12, 331-338 (2002).
-
(2002)
Trends Cardiovasc. Med.
, vol.12
, pp. 331-338
-
-
Olson, S.J.1
Chuang, Y.J.2
-
11
-
-
0025831251
-
Predominant contribution of surface approximation to the mechanism of heparin acceleration of the antithrombin-thrombin reaction. Elucidation from salt concentration effects
-
Olson, S.T. & Bjork, I. Predominant contribution of surface approximation to the mechanism of heparin acceleration of the antithrombin-thrombin reaction. Elucidation from salt concentration effects. J. Biol. Chem. 266, 6353-6364 (1991).
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 6353-6364
-
-
Olson, S.T.1
Bjork, I.2
-
12
-
-
0025730441
-
Quantitative characterization of the thrombin-heparin interaction
-
Olson, S.T. Quantitative characterization of the thrombin-heparin interaction. J. Biol. Chem. 266, 6342-6352 (1999).
-
(1999)
J. Biol. Chem.
, vol.266
, pp. 6342-6352
-
-
Olson, S.T.1
-
13
-
-
0033816136
-
An update on heparins at the beginning of the new millennium
-
Fareed, J., Hoppensteadt, D.A. & Bick, R.L. An update on heparins at the beginning of the new millennium. Semin. Thromb. Hemost. 26 (suppl. 1), 5-21 (2000).
-
(2000)
Semin. Thromb. Hemost.
, vol.26
, Issue.SUPPL. 1
, pp. 5-21
-
-
Fareed, J.1
Hoppensteadt, D.A.2
Bick, R.L.3
-
14
-
-
0024456056
-
Anti-thrombin activities of heparin. Effect of saccharide chain length on thrombin inhibition by heparin cofactor II and by antithrombin
-
Bray, B., Lane, D.A., Freyssinet, J.M., Pejler, G. & Lindahl, U. Anti-thrombin activities of heparin. Effect of saccharide chain length on thrombin inhibition by heparin cofactor II and by antithrombin. Biochem. J. 262, 225-232 (1989).
-
(1989)
Biochem. J.
, vol.262
, pp. 225-232
-
-
Bray, B.1
Lane, D.A.2
Freyssinet, J.M.3
Pejler, G.4
Lindahl, U.5
-
15
-
-
0036213008
-
Heparin-induced thrombocytopenia: An overview
-
Kelton, J.G. Heparin-induced thrombocytopenia: an overview. Blood Rev. 16, 77-80 (2002).
-
(2002)
Blood Rev.
, vol.16
, pp. 77-80
-
-
Kelton, J.G.1
-
16
-
-
0344938369
-
Synthesis of thrombin-inhibiting heparin mimetics without side effects
-
Petitou, M. et al. Synthesis of thrombin-inhibiting heparin mimetics without side effects. Nature 398, 417-422 (1999).
-
(1999)
Nature
, vol.398
, pp. 417-422
-
-
Petitou, M.1
-
17
-
-
0141844463
-
Canonical inhibitor-like interactions explain reactivity of α1-proteinase inhibitor Pittsburgh and antithrombin with proteinases
-
Dementiev, A., Simonovic, M., Volz, K. & Gettins, P.G. Canonical inhibitor-like interactions explain reactivity of α1-proteinase inhibitor Pittsburgh and antithrombin with proteinases. J. Biol. Chem. 278, 37881-37887 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 37881-37887
-
-
Dementiev, A.1
Simonovic, M.2
Volz, K.3
Gettins, P.G.4
-
18
-
-
0034763848
-
The structure of a Michaelis serpin-protease complex
-
Ye, S., et al. The structure of a Michaelis serpin-protease complex. Nat. Struct. Biol. 8, 979-983 (2001).
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 979-983
-
-
Ye, S.1
-
19
-
-
0037143655
-
Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism
-
Baglin, T.P., Carrell, R.W., Church, F.C., Esmon, C.T. & Huntington, J.A. Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism. Proc. Natl. Acad. Sci. USA 99, 11079-11084 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 11079-11084
-
-
Baglin, T.P.1
Carrell, R.W.2
Church, F.C.3
Esmon, C.T.4
Huntington, J.A.5
-
20
-
-
0014211618
-
On the size of the active site in proteases. I. Papain
-
Schechter, I. & Berger, A. On the size of the active site in proteases. I. Papain. Biochem. Biophys. Res. Commun. 27, 157-162 (1967).
-
(1967)
Biochem. Biophys. Res. Commun.
, vol.27
, pp. 157-162
-
-
Schechter, I.1
Berger, A.2
-
21
-
-
0031445112
-
The anticoagulant activation of antithrombin by heparin
-
Jin, L., et al. The anticoagulant activation of antithrombin by heparin. Proc. Natl. Acad. Sci. USA 94, 14683-14688 (1997).
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 14683-14688
-
-
Jin, L.1
-
22
-
-
0035805579
-
Heparin enhances the specificity of antithrombin for thrombin and factor Xa independent of the reactive center loop sequence. Evidence for an exosite determinant of factor Xa specificity in heparin-activated antithrombin
-
Chuang, Y.J., Swanson, R., Raja, S.M. & Olson, S.T. Heparin enhances the specificity of antithrombin for thrombin and factor Xa independent of the reactive center loop sequence. Evidence for an exosite determinant of factor Xa specificity in heparin-activated antithrombin. J. Biol. Chem. 276, 14961-14971 (2001).
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 14961-14971
-
-
Chuang, Y.J.1
Swanson, R.2
Raja, S.M.3
Olson, S.T.4
-
24
-
-
0028332939
-
Molecular mapping of the heparin-binding exosite of thrombin
-
Sheehan, J.P. & Sadler, J.E. Molecular mapping of the heparin-binding exosite of thrombin. Proc. Natl. Acad. Sci. USA 91, 5518-5522 (1994).
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 5518-5522
-
-
Sheehan, J.P.1
Sadler, J.E.2
-
25
-
-
0028338559
-
Glycosaminoglycan contributions to both protein C activation and thrombin inhibition involve a common arginine-rich site in thrombin that includes residues arginine 93, 97, and 101
-
Ye, J., Rezaie, A.R. & Esmon, C.T. Glycosaminoglycan contributions to both protein C activation and thrombin inhibition involve a common arginine-rich site in thrombin that includes residues arginine 93, 97, and 101. J. Biol. Chem. 269, 17965-17970 (1994).
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 17965-17970
-
-
Ye, J.1
Rezaie, A.R.2
Esmon, C.T.3
-
26
-
-
0030822767
-
Influence of Arginines 93, 97, and 101 of thrombin to its functional specificity
-
He, X., Ye, J., Esmon, C.T. & Rezaie, A.R. Influence of Arginines 93, 97, and 101 of thrombin to its functional specificity. Biochemistry 36, 8969-8976 (1997).
-
(1997)
Biochemistry
, vol.36
, pp. 8969-8976
-
-
He, X.1
Ye, J.2
Esmon, C.T.3
Rezaie, A.R.4
-
27
-
-
0030991983
-
Functional requirements for inhibition of thrombin by antithrombin III in the presence and absence of heparin
-
Tsiang, M., Jain, A.K., & Gibbs, C.S. Functional requirements for inhibition of thrombin by antithrombin III in the presence and absence of heparin. J. Biol. Chem. 272, 12024-12029 (1997).
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 12024-12029
-
-
Tsiang, M.1
Jain, A.K.2
Gibbs, C.S.3
-
28
-
-
0031052393
-
Rational engineering of activity and specificity in a serine protease
-
Dang, Q.D., Guinto, E.R. & Di Cera, E. Rational engineering of activity and specificity in a serine protease. Nat. Biotechnol. 15, 146-149 (1997).
-
(1997)
Nat. Biotechnol.
, vol.15
, pp. 146-149
-
-
Dang, Q.D.1
Guinto, E.R.2
Di Cera, E.3
-
29
-
-
0029090336
-
+ binding site of thrombin
-
+ binding site of thrombin. J. Biol. Chem. 270, 22089-22092 (1995).
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 22089-22092
-
-
Di Cera, E.1
-
30
-
-
12644264319
-
Protein engineering thrombin for optimal specificity and potency of anticoagulant activity in vivo
-
Tsiang, M., et al. Protein engineering thrombin for optimal specificity and potency of anticoagulant activity in vivo. Biochemistry 35, 16449-16457 (1996).
-
(1996)
Biochemistry
, vol.35
, pp. 16449-16457
-
-
Tsiang, M.1
-
31
-
-
0029118088
-
Identification of thrombin residues that modulate its interactions with antithrombin III and α 1-antitrypsin
-
Le Bonniec, B.F., Guinto, E.R. & Stone, S.R. Identification of thrombin residues that modulate its interactions with antithrombin III and α 1-antitrypsin. Biochemistry 34, 12241-12248 (1995).
-
(1995)
Biochemistry
, vol.34
, pp. 12241-12248
-
-
Le Bonniec, B.F.1
Guinto, E.R.2
Stone, S.R.3
-
32
-
-
0347695991
-
Localization of an antithrombin exosite that promotes rapid inhibition of factors Xa and IXa dependent on heparin activation of the serpin
-
Izaguirre, G., Zhang, W., Swanson, R., Bedsted, T. & Olson, S.T. Localization of an antithrombin exosite that promotes rapid inhibition of factors Xa and IXa dependent on heparin activation of the serpin. J. Biol. Chem. 278, 51433-51440 (2003).
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 51433-51440
-
-
Izaguirre, G.1
Zhang, W.2
Swanson, R.3
Bedsted, T.4
Olson, S.T.5
-
33
-
-
4344710558
-
Antithrombin-anhydrothrombin-heparin ternary complex structure reveals the basis of inhibitor specificity
-
advance online publication, 15 August (doi:10.1038/nsmb 810).
-
Dementiev, A., Petitou, M., Herbert, J.M. & Gettins, P.G.W. Antithrombin-anhydrothrombin-heparin ternary complex structure reveals the basis of inhibitor specificity. Nat. Struct. Mol. Biol. advance online publication, 15 August 2004 (doi:10.1038/nsmb810).
-
(2004)
Nat. Struct. Mol. Biol.
-
-
Dementiev, A.1
Petitou, M.2
Herbert, J.M.3
Gettins, P.G.W.4
-
34
-
-
1042289732
-
The influence of hinge region residue Glu381 on antithrombin allostery and metastability
-
Johnson, D.J. & Huntington, J.A. The influence of hinge region residue Glu381 on antithrombin allostery and metastability. J. Biol. Chem. 279, 4913-4921 (2004).
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 4913-4921
-
-
Johnson, D.J.1
Huntington, J.A.2
-
36
-
-
0034517589
-
An approach to multi-copy search in molecular replacement
-
Vagin, A. & Teplyakov, A. An approach to multi-copy search in molecular replacement. Acta Crystallogr. D 56, 1622-1624 (2000).
-
(2000)
Acta Crystallogr. D
, vol.56
, pp. 1622-1624
-
-
Vagin, A.1
Teplyakov, A.2
-
37
-
-
0002705842
-
A visual protein crystallographic software system for X11/XView
-
McRee, D.E. A visual protein crystallographic software system for X11/XView. J. Mol. Graph. 10, 44-46 (1992).
-
(1992)
J. Mol. Graph.
, vol.10
, pp. 44-46
-
-
McRee, D.E.1
-
38
-
-
0030158429
-
PRODRG, a program for generating molecular topologies and unique molecular descriptors from coordinates of small molecules
-
van Aalten, D.M., et al. PRODRG, a program for generating molecular topologies and unique molecular descriptors from coordinates of small molecules. J. Comput. Aided Mol. Des. 10, 255-262 (1996).
-
(1996)
J. Comput. Aided Mol. Des.
, vol.10
, pp. 255-262
-
-
Van Aalten, D.M.1
-
39
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger, A.T., et al. Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr. D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
-
40
-
-
0030729838
-
An extensively modified version of MolScript that includes greatly enhanced coloring capabilities
-
Esnouf, R.M. An extensively modified version of MolScript that includes greatly enhanced coloring capabilities. J. Mol. Graph. Model. 15, 132 (1997).
-
(1997)
J. Mol. Graph. Model.
, vol.15
, pp. 132
-
-
Esnouf, R.M.1
-
41
-
-
0028057108
-
Raster3d version 2.0: A program for photorealistic molecular graphics
-
Merritt, E.A. & Murphy, M.E.P. Raster3d version 2.0: a program for photorealistic molecular graphics. Acta Crystallogr. D 50, 869-873 (1994).
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 869-873
-
-
Merritt, E.A.1
Murphy, M.E.P.2
-
42
-
-
0041846670
-
Crystal structure of antithrombin in a heparin-bound intermediate state
-
Johnson, D.J. & Huntington, J.A. Crystal structure of antithrombin in a heparin-bound intermediate state. Biochemistry 42, 8712-8719 (2003).
-
(2003)
Biochemistry
, vol.42
, pp. 8712-8719
-
-
Johnson, D.J.1
Huntington, J.A.2
|