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Volumn 105, Issue 12, 2008, Pages 4733-4738

Splicing mediates the activity of four putative cellular internal ribosome entry sites

Author keywords

Bicistronic; Dicistronic; RNA splicing; Translation

Indexed keywords

GREEN FLUORESCENT PROTEIN; MESSENGER RNA; INITIATION FACTOR 4G; RBM3 PROTEIN, HUMAN; RNA BINDING PROTEIN; UNCLASSIFIED DRUG; VIRUS RNA; X LINKED INHIBITOR OF APOPTOSIS;

EID: 42449126726     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0710650105     Document Type: Article
Times cited : (64)

References (46)
  • 1
    • 0032437667 scopus 로고    scopus 로고
    • Control of translation initiation in animals
    • Gray NK, Wickens M (1998) Control of translation initiation in animals. Annu Rev Cell Dev Biol 14:399-458.
    • (1998) Annu Rev Cell Dev Biol , vol.14 , pp. 399-458
    • Gray, N.K.1    Wickens, M.2
  • 2
    • 0024546509 scopus 로고
    • The scanning model for translation: An update
    • Kozak M (1989) The scanning model for translation: An update. J Cell Biol 108:229-241.
    • (1989) J Cell Biol , vol.108 , pp. 229-241
    • Kozak, M.1
  • 3
    • 0037121050 scopus 로고    scopus 로고
    • Pushing the limits of the scanning mechanism for initiation of translation
    • Kozak M (2002) Pushing the limits of the scanning mechanism for initiation of translation. Gene 299:1-34.
    • (2002) Gene , vol.299 , pp. 1-34
    • Kozak, M.1
  • 4
    • 0023758546 scopus 로고
    • A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation
    • Jang SK, et al. (1988) A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation. J Virol 62:2636-2643.
    • (1988) J Virol , vol.62 , pp. 2636-2643
    • Jang, S.K.1
  • 5
    • 0023720048 scopus 로고
    • Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA
    • Pelletier J, Sonenberg N (1988) Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA. Nature 334:320-325.
    • (1988) Nature , vol.334 , pp. 320-325
    • Pelletier, J.1    Sonenberg, N.2
  • 6
    • 0034235466 scopus 로고    scopus 로고
    • Picornavirus RNA translation: Roles for cellular proteins
    • Belsham GJ, Sonenberg N (2000) Picornavirus RNA translation: Roles for cellular proteins. Trends Microbiol 8:330-335.
    • (2000) Trends Microbiol , vol.8 , pp. 330-335
    • Belsham, G.J.1    Sonenberg, N.2
  • 8
    • 0035008872 scopus 로고    scopus 로고
    • New ways of initiating translation in eukaryotes?
    • Kozak M (2001) New ways of initiating translation in eukaryotes? Mol Cell Biol 21:1899-1907.
    • (2001) Mol Cell Biol , vol.21 , pp. 1899-1907
    • Kozak, M.1
  • 9
    • 29144444289 scopus 로고    scopus 로고
    • A second look at cellular mRNA sequences said to function as internal ribosome entry sites
    • Kozak M (2005) A second look at cellular mRNA sequences said to function as internal ribosome entry sites. Nucleic Acids Res 33:6593-6602.
    • (2005) Nucleic Acids Res , vol.33 , pp. 6593-6602
    • Kozak, M.1
  • 10
    • 85045129771 scopus 로고    scopus 로고
    • New ways of initiating translation in eukaryotes
    • Schneider R, et al. (2001) New ways of initiating translation in eukaryotes. Mol Cell Biol 21:8238-8246.
    • (2001) Mol Cell Biol , vol.21 , pp. 8238-8246
    • Schneider, R.1
  • 11
    • 1242303422 scopus 로고    scopus 로고
    • Demonstrating internal ribosome entry sites in eukaryotic mRNAs using stringent RNA test procedures
    • Van Eden ME, Byrd MP, Sherrill KW, Lloyd RE (2004) Demonstrating internal ribosome entry sites in eukaryotic mRNAs using stringent RNA test procedures. RNA 10:720-730.
    • (2004) RNA , vol.10 , pp. 720-730
    • Van Eden, M.E.1    Byrd, M.P.2    Sherrill, K.W.3    Lloyd, R.E.4
  • 12
    • 0030809393 scopus 로고    scopus 로고
    • Location of the internal ribosome entry site in the 5′ non-coding region of the immunoglobulin heavy-chain binding protein (BiP) mRNA: Evidence for specific RNA-protein interactions
    • Yang Q, Sarnow P (1997) Location of the internal ribosome entry site in the 5′ non-coding region of the immunoglobulin heavy-chain binding protein (BiP) mRNA: Evidence for specific RNA-protein interactions. Nucleic Acids Res 25:2800-2807.
    • (1997) Nucleic Acids Res , vol.25 , pp. 2800-2807
    • Yang, Q.1    Sarnow, P.2
  • 13
    • 0032570708 scopus 로고    scopus 로고
    • Functional characterization of the internal ribosome entry site of eIF4G mRNA
    • Gan W, LaCelle M, Rhoads RE (1998) Functional characterization of the internal ribosome entry site of eIF4G mRNA. J Biol Chem 273:5006-5012.
    • (1998) J Biol Chem , vol.273 , pp. 5006-5012
    • Gan, W.1    LaCelle, M.2    Rhoads, R.E.3
  • 14
    • 0034127011 scopus 로고    scopus 로고
    • Translation of NRF mRNA is mediated by highly efficient internal ribosome entry
    • Oumard A, Hennecke M, Hauser H, Nourbakhsh M (2000) Translation of NRF mRNA is mediated by highly efficient internal ribosome entry. Mol Cell Biol 20:2755-2759.
    • (2000) Mol Cell Biol , vol.20 , pp. 2755-2759
    • Oumard, A.1    Hennecke, M.2    Hauser, H.3    Nourbakhsh, M.4
  • 15
    • 0141817954 scopus 로고    scopus 로고
    • The internal ribosome entry site (IRES) contained within the RNA-binding motif protein 3 (Rbm3) mRNA is composed of functionally distinct elements
    • Chappell SA, Mauro VP (2003) The internal ribosome entry site (IRES) contained within the RNA-binding motif protein 3 (Rbm3) mRNA is composed of functionally distinct elements. J Biol Chem 278:33793-33800.
    • (2003) J Biol Chem , vol.278 , pp. 33793-33800
    • Chappell, S.A.1    Mauro, V.P.2
  • 16
    • 0031869662 scopus 로고    scopus 로고
    • Translation of vascular endothelial growth factor mRNA by internal ribosome entry: Implications for translation under hypoxia
    • Stein I, et al. (1998) Translation of vascular endothelial growth factor mRNA by internal ribosome entry: Implications for translation under hypoxia. Mol Cell Biol 18:3112-3119.
    • (1998) Mol Cell Biol , vol.18 , pp. 3112-3119
    • Stein, I.1
  • 17
    • 0033160190 scopus 로고    scopus 로고
    • A new internal-ribosome-entry-site motif potentiates XIAP-mediated cytoprotection
    • Holcik M, Lefebvre C, Yeh C, Chow T, Korneluk RG (1999) A new internal-ribosome-entry-site motif potentiates XIAP-mediated cytoprotection. Nat Cell Biol 1:190-192.
    • (1999) Nat Cell Biol , vol.1 , pp. 190-192
    • Holcik, M.1    Lefebvre, C.2    Yeh, C.3    Chow, T.4    Korneluk, R.G.5
  • 18
    • 0031790633 scopus 로고    scopus 로고
    • Cap-independent polysomal association of natural mRNAs encoding c-myc, BiP, and eIF4G conferred by internal ribosome entry sites
    • Johannes G, Sarnow P (1998) Cap-independent polysomal association of natural mRNAs encoding c-myc, BiP, and eIF4G conferred by internal ribosome entry sites. RNA 4:1500-1513.
    • (1998) RNA , vol.4 , pp. 1500-1513
    • Johannes, G.1    Sarnow, P.2
  • 20
    • 0037031879 scopus 로고    scopus 로고
    • Translational regulation of the JunD messenger RNA
    • Short JD, Pfarr CM (2002) Translational regulation of the JunD messenger RNA. J Biol Chem 277:32697-32705.
    • (2002) J Biol Chem , vol.277 , pp. 32697-32705
    • Short, J.D.1    Pfarr, C.M.2
  • 21
    • 0035813177 scopus 로고    scopus 로고
    • A 5′ leader of Rbm3, a cold stress-induced mRNA, mediates internal initiation of translation with increased efficiency under conditions of mild hypothermia
    • Chappell SA, Owens GC, Mauro VP (2001) A 5′ leader of Rbm3, a cold stress-induced mRNA, mediates internal initiation of translation with increased efficiency under conditions of mild hypothermia. J Biol Chem 276:36917-36922.
    • (2001) J Biol Chem , vol.276 , pp. 36917-36922
    • Chappell, S.A.1    Owens, G.C.2    Mauro, V.P.3
  • 22
    • 0942268832 scopus 로고    scopus 로고
    • Splicing enhances translation in mammalian cells: An additional function of the exon junction complex
    • Nott A, Le Hir H, Moore MJ (2004) Splicing enhances translation in mammalian cells: An additional function of the exon junction complex. Genes Dev 18:210-222.
    • (2004) Genes Dev , vol.18 , pp. 210-222
    • Nott, A.1    Le Hir, H.2    Moore, M.J.3
  • 23
    • 34248677082 scopus 로고    scopus 로고
    • Adaptive evolution of a tagged chimeric gammaretrovirus: Identification of novel cis-acting elements that modulate splicing
    • Logg CR, Baranick BT, Lemp NA, Kasahara N (2007) Adaptive evolution of a tagged chimeric gammaretrovirus: Identification of novel cis-acting elements that modulate splicing. J Mol Biol 369:1214-1229.
    • (2007) J Mol Biol , vol.369 , pp. 1214-1229
    • Logg, C.R.1    Baranick, B.T.2    Lemp, N.A.3    Kasahara, N.4
  • 24
    • 0002501721 scopus 로고    scopus 로고
    • eds Coffin JM, Hughes SH, Varmus H Cold Spring Harbor Lab Press, Plainview, NY, pp
    • Rabson AB, Graves BJ (1997) in Retroviruses, eds Coffin JM, Hughes SH, Varmus H (Cold Spring Harbor Lab Press, Plainview, NY), pp 205-261.
    • (1997) Retroviruses , pp. 205-261
    • Rabson, A.B.1    Graves, B.J.2
  • 25
    • 21444446061 scopus 로고    scopus 로고
    • Translation of eukaryotic translation initiation factor 4GI (eIF4GI) proceeds from multiple mRNAs containing a novel cap-dependent internal ribosome entry site (IRES) that is active during poliovirus infection
    • Byrd MP, Zamora M, Lloyd RE (2005) Translation of eukaryotic translation initiation factor 4GI (eIF4GI) proceeds from multiple mRNAs containing a novel cap-dependent internal ribosome entry site (IRES) that is active during poliovirus infection. J Biol Chem 280:18610-18622.
    • (2005) J Biol Chem , vol.280 , pp. 18610-18622
    • Byrd, M.P.1    Zamora, M.2    Lloyd, R.E.3
  • 26
    • 0030021166 scopus 로고    scopus 로고
    • Internal initiation of translation directed by the 5′-untranslated region of the mRNA for eIF4G, a factor involved in the picornavirus-induced switch from cap-dependent to internal initiation
    • Gan W, Rhoads RE (1996) Internal initiation of translation directed by the 5′-untranslated region of the mRNA for eIF4G, a factor involved in the picornavirus-induced switch from cap-dependent to internal initiation. J Biol Chem 271:623-626.
    • (1996) J Biol Chem , vol.271 , pp. 623-626
    • Gan, W.1    Rhoads, R.E.2
  • 27
    • 85047698266 scopus 로고    scopus 로고
    • Improved co-expression of multiple genes in vectors containing internal ribosome entry sites (IRESes) from human genes
    • Wong ET, Ngoi SM, Lee CG (2002) Improved co-expression of multiple genes in vectors containing internal ribosome entry sites (IRESes) from human genes. Gene Ther 9:337-344.
    • (2002) Gene Ther , vol.9 , pp. 337-344
    • Wong, E.T.1    Ngoi, S.M.2    Lee, C.G.3
  • 28
    • 16344384031 scopus 로고    scopus 로고
    • Factors limiting autogene-based cytoplasmic expression systems
    • Finn J, MacLachlan I, Cullis P (2005) Factors limiting autogene-based cytoplasmic expression systems. FASEB J 19:608-610.
    • (2005) FASEB J , vol.19 , pp. 608-610
    • Finn, J.1    MacLachlan, I.2    Cullis, P.3
  • 29
    • 0036838078 scopus 로고    scopus 로고
    • Regulation of gene expression by internal ribosome entry sites or cryptic promoters: The eIF4G story
    • Han B, Zhang JT (2002) Regulation of gene expression by internal ribosome entry sites or cryptic promoters: The eIF4G story. Mol Cell Biol 22:7372-7384.
    • (2002) Mol Cell Biol , vol.22 , pp. 7372-7384
    • Han, B.1    Zhang, J.T.2
  • 30
    • 34447515470 scopus 로고    scopus 로고
    • NRF IRES activity is mediated by RNA binding protein JKTBP1 and a 14-nt RNA element
    • Reboll MR, et al. (2007) NRF IRES activity is mediated by RNA binding protein JKTBP1 and a 14-nt RNA element. RNA 13:1328-1340.
    • (2007) RNA , vol.13 , pp. 1328-1340
    • Reboll, M.R.1
  • 31
    • 0037215485 scopus 로고    scopus 로고
    • The internal ribosome entry site-mediated translation of antiapoptotic protein XIAP is modulated by the heterogeneous nuclear ribonucleoproteins C1 and C2
    • Holcik M, Gordon BW, Korneluk RG (2003) The internal ribosome entry site-mediated translation of antiapoptotic protein XIAP is modulated by the heterogeneous nuclear ribonucleoproteins C1 and C2. Mol Cell Biol 23:280-288.
    • (2003) Mol Cell Biol , vol.23 , pp. 280-288
    • Holcik, M.1    Gordon, B.W.2    Korneluk, R.G.3
  • 32
    • 0025155473 scopus 로고
    • Cytoplasmic expression system based on constitutive synthesis of bacteriophage T7 RNA polymerase in mammalian cells
    • Elroy-Stein O, Moss B (1990) Cytoplasmic expression system based on constitutive synthesis of bacteriophage T7 RNA polymerase in mammalian cells. Proc Natl Acad Sci USA 87:6743-6747.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 6743-6747
    • Elroy-Stein, O.1    Moss, B.2
  • 33
    • 17644421851 scopus 로고    scopus 로고
    • Cryptic promoter activity in the DNA sequence corresponding to the pim-1 5′-UTR
    • Wang Z, Weaver M, Magnuson NS (2005) Cryptic promoter activity in the DNA sequence corresponding to the pim-1 5′-UTR. Nucleic Acids Res 33:2248-2258.
    • (2005) Nucleic Acids Res , vol.33 , pp. 2248-2258
    • Wang, Z.1    Weaver, M.2    Magnuson, N.S.3
  • 34
    • 27144436375 scopus 로고    scopus 로고
    • Spurious splicing within the XIAP 5′ UTR occurs in the Rluc/Fluc but not the betagal/CAT bicistronic reporter system
    • Holcik M, et al. (2005) Spurious splicing within the XIAP 5′ UTR occurs in the Rluc/Fluc but not the betagal/CAT bicistronic reporter system. RNA 11:1605-1609.
    • (2005) RNA , vol.11 , pp. 1605-1609
    • Holcik, M.1
  • 35
    • 0025883162 scopus 로고
    • Internal initiation of translation mediated by the 5′ leader of a cellular mRNA
    • Macejak DG, Sarnow P (1991) Internal initiation of translation mediated by the 5′ leader of a cellular mRNA. Nature 353:90-94.
    • (1991) Nature , vol.353 , pp. 90-94
    • Macejak, D.G.1    Sarnow, P.2
  • 36
    • 0031727822 scopus 로고    scopus 로고
    • A secreted DNA-binding protein that is translated through an internal ribosome entry site (IRES) and distributed in a discrete pattern in the central nervous system
    • Kim JG, Armstrong RC, Berndt JA, Kim NW, Hudson LD (1998) A secreted DNA-binding protein that is translated through an internal ribosome entry site (IRES) and distributed in a discrete pattern in the central nervous system. Mol Cell Neurosci 12:119-140.
    • (1998) Mol Cell Neurosci , vol.12 , pp. 119-140
    • Kim, J.G.1    Armstrong, R.C.2    Berndt, J.A.3    Kim, N.W.4    Hudson, L.D.5
  • 37
    • 0034711379 scopus 로고    scopus 로고
    • Polypyrimidine tract-binding protein inhibits translation of bip mRNA
    • Kim YK, Hahm B, Jang SK (2000) Polypyrimidine tract-binding protein inhibits translation of bip mRNA. J Mol Biol 304:119-133.
    • (2000) J Mol Biol , vol.304 , pp. 119-133
    • Kim, Y.K.1    Hahm, B.2    Jang, S.K.3
  • 38
    • 0037423208 scopus 로고    scopus 로고
    • Distinct regulation of internal ribosome entry site-mediated translation following cellular stress is mediated by apoptotic fragments of eIF4G translation initiation factor family members eIF4GI and p97/DAP5/NAT1
    • Nevins TA, Harder ZM, Korneluk RG, Holcik M (2003) Distinct regulation of internal ribosome entry site-mediated translation following cellular stress is mediated by apoptotic fragments of eIF4G translation initiation factor family members eIF4GI and p97/DAP5/NAT1. J Biol Chem 278:3572-3579.
    • (2003) J Biol Chem , vol.278 , pp. 3572-3579
    • Nevins, T.A.1    Harder, Z.M.2    Korneluk, R.G.3    Holcik, M.4
  • 39
    • 10744229841 scopus 로고    scopus 로고
    • Lentiviral vectors with two independent internal promoters transfer high-level expression of multiple transgenes to human hematopoietic stemprogenitor cells
    • Yu X, et al. (2003) Lentiviral vectors with two independent internal promoters transfer high-level expression of multiple transgenes to human hematopoietic stemprogenitor cells. Mol Ther 7:827-838.
    • (2003) Mol Ther , vol.7 , pp. 827-838
    • Yu, X.1
  • 40
    • 0242285647 scopus 로고    scopus 로고
    • Alternative ways to think about mRNA sequences and proteins that appear to promote internal initiation of translation
    • Kozak M (2003) Alternative ways to think about mRNA sequences and proteins that appear to promote internal initiation of translation. Gene 318:1-23.
    • (2003) Gene , vol.318 , pp. 1-23
    • Kozak, M.1
  • 41
    • 20044389169 scopus 로고    scopus 로고
    • Internal ribosome entry segment-mediated translation during apoptosis: The role of IRES-trans-acting factors
    • Spriggs KA, Bushell M, Mitchell SA, Willis AE (2005) Internal ribosome entry segment-mediated translation during apoptosis: The role of IRES-trans-acting factors. Cell Death Differ 12:585-591.
    • (2005) Cell Death Differ , vol.12 , pp. 585-591
    • Spriggs, K.A.1    Bushell, M.2    Mitchell, S.A.3    Willis, A.E.4
  • 42
    • 14044250981 scopus 로고    scopus 로고
    • Codonoptimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo
    • Tannous BA, Kim DE, Fernandez JL, Weissleder R, Breakefield XO (2005) Codonoptimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo. Mol Ther 11:435-443.
    • (2005) Mol Ther , vol.11 , pp. 435-443
    • Tannous, B.A.1    Kim, D.E.2    Fernandez, J.L.3    Weissleder, R.4    Breakefield, X.O.5
  • 43
    • 0029791403 scopus 로고    scopus 로고
    • Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information
    • Hebsgaard SM, et al. (1996) Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information. Nucleic Acids Res 24:3439-3452.
    • (1996) Nucleic Acids Res , vol.24 , pp. 3439-3452
    • Hebsgaard, S.M.1
  • 45
    • 0036893192 scopus 로고    scopus 로고
    • Tissue-specific transcriptional targeting of a replication-competent retroviral vector
    • Logg CR, Logg A, Matusik RJ, Bochner BH, Kasahara N (2002) Tissue-specific transcriptional targeting of a replication-competent retroviral vector. J Virol 76:12783-12791.
    • (2002) J Virol , vol.76 , pp. 12783-12791
    • Logg, C.R.1    Logg, A.2    Matusik, R.J.3    Bochner, B.H.4    Kasahara, N.5
  • 46
    • 0030881446 scopus 로고    scopus 로고
    • A simple and reliable method for screening retroviral producer clones without selectable markers
    • Onodera M, et al. (1997) A simple and reliable method for screening retroviral producer clones without selectable markers. Hum Gene Ther 8:1189-1194.
    • (1997) Hum Gene Ther , vol.8 , pp. 1189-1194
    • Onodera, M.1


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