메뉴 건너뛰기




Volumn 51, Issue 3, 2008, Pages 222-235

Identification and characterization of zebrafish ocular formation genes

Author keywords

atp6v0c; bzw1a; Crystallin; hspa8; In situ hybridization; Lens; Masterblind axin1; Oligonucleotide microarrays; Opsin; Retina; rpl7a

Indexed keywords

AXIN PROTEIN; EYE PROTEIN; REPRESSOR PROTEIN; UNCLASSIFIED DRUG; ZEBRAFISH PROTEIN;

EID: 42449121730     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/G07-098     Document Type: Article
Times cited : (23)

References (71)
  • 1
    • 0032573579 scopus 로고    scopus 로고
    • Zebrafish hox clusters and vertebrate genome evolution
    • PMID:9831563, doi:10.1126/science.282.5394.1711
    • Amores, A., Force, A., Yan, Y.L., Joly, L., Amemiya, C., Fritz, A., et al. 1998. Zebrafish hox clusters and vertebrate genome evolution. Science (Washington, D.C.), 282: 1711-1714. doi:10.1126/science.282.5394.1711. PMID:9831563.
    • (1998) Science (Washington, D.C.) , vol.282 , pp. 1711-1714
    • Amores, A.1    Force, A.2    Yan, Y.L.3    Joly, L.4    Amemiya, C.5    Fritz, A.6
  • 2
    • 4444220604 scopus 로고    scopus 로고
    • Identification of 315 genes essential for early zebrafish development
    • PMID: 15256591, doi:10.1073/pnas.0403929101
    • Amsterdam, A., Nissen, R.M., Sun, Z., Swindell, E.C., Farrington, S., and Hopkins, N. 2004. Identification of 315 genes essential for early zebrafish development. Proc. Natl. Acad. Sci. U.S.A. 101: 12792-12797. doi:10.1073/pnas.0403929101. PMID: 15256591.
    • (2004) Proc. Natl. Acad. Sci. U.S.A , vol.101 , pp. 12792-12797
    • Amsterdam, A.1    Nissen, R.M.2    Sun, Z.3    Swindell, E.C.4    Farrington, S.5    Hopkins, N.6
  • 3
    • 4143088433 scopus 로고    scopus 로고
    • Ageing and vision: Structure, stability and function of lens crystallins
    • PMID:15302206, doi:10.1016/j.pbiomolbio.2003.11.012
    • Bloemendal, H., de Jong, W., Jaenicke, R., Lubsen, N.H., Slingsby, C., and Tardieu, A. 2004. Ageing and vision: structure, stability and function of lens crystallins. Prog. Biophys. Mol. Biol. 86: 407-485. doi:10.1016/j.pbiomolbio.2003.11.012. PMID:15302206.
    • (2004) Prog. Biophys. Mol. Biol , vol.86 , pp. 407-485
    • Bloemendal, H.1    de Jong, W.2    Jaenicke, R.3    Lubsen, N.H.4    Slingsby, C.5    Tardieu, A.6
  • 4
    • 26244454983 scopus 로고    scopus 로고
    • Gene expression profiles of intact and regenerating zebrafish retina
    • PMID:16205622
    • Cameron, D.A., Gentile, K.L., Middleton, F.A., and Yurco, P. 2005. Gene expression profiles of intact and regenerating zebrafish retina. Mol. Vis. 11: 775-791. PMID:16205622.
    • (2005) Mol. Vis , vol.11 , pp. 775-791
    • Cameron, D.A.1    Gentile, K.L.2    Middleton, F.A.3    Yurco, P.4
  • 5
    • 0037296550 scopus 로고    scopus 로고
    • Gene duplication and spectral diversification of cone visual pigments of zebrafish
    • PMID:12618404
    • Chinen, A., Hamaoka, T., Yamada, Y., and Kawamura, S. 2003. Gene duplication and spectral diversification of cone visual pigments of zebrafish. Genetics, 163: 663-675. PMID:12618404.
    • (2003) Genetics , vol.163 , pp. 663-675
    • Chinen, A.1    Hamaoka, T.2    Yamada, Y.3    Kawamura, S.4
  • 6
    • 0035184055 scopus 로고    scopus 로고
    • Early eye development in vertebrates
    • PMID:11687490, doi:10.1146/annurev.cellbio.17.1. 255
    • Chow, R.L., and Lang, R.A. 2001. Early eye development in vertebrates. Annu. Rev. Cell Dev. Biol. 17: 255-296. doi:10.1146/annurev.cellbio.17.1. 255. PMID:11687490.
    • (2001) Annu. Rev. Cell Dev. Biol , vol.17 , pp. 255-296
    • Chow, R.L.1    Lang, R.A.2
  • 7
    • 2442707716 scopus 로고    scopus 로고
    • Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes
    • PMID:15014147, doi:10.1093/molbev/msh114
    • Christoffels, A., Koh, E.G., Chia, J.M., Brenner, S., Aparicio, S., and Venkatesh, B. 2004. Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes. Mol. Biol. Evol. 21: 1146-1151. doi:10.1093/molbev/msh114. PMID:15014147.
    • (2004) Mol. Biol. Evol , vol.21 , pp. 1146-1151
    • Christoffels, A.1    Koh, E.G.2    Chia, J.M.3    Brenner, S.4    Aparicio, S.5    Venkatesh, B.6
  • 8
    • 0027300506 scopus 로고
    • Heat shock proteins: Molecular chaperones of protein biogenesis
    • PMID:8336673
    • Craig, E.A., Gambill, B.D., and Nelson, R.J. 1993. Heat shock proteins: molecular chaperones of protein biogenesis. Microbiol. Rev. 57: 402-414. PMID:8336673.
    • (1993) Microbiol. Rev , vol.57 , pp. 402-414
    • Craig, E.A.1    Gambill, B.D.2    Nelson, R.J.3
  • 9
    • 1642442576 scopus 로고    scopus 로고
    • Mafs, Prox1, and Pax6 can regulate chicken βB1-crystallin gene expression
    • PMID:14707122, doi:10.1074/jbc. M312414200
    • Cui, W., Tomarev, S.I., Piatigorsky, J., Chepelinsky, A.B., and Duncan, M.K. 2004. Mafs, Prox1, and Pax6 can regulate chicken βB1-crystallin gene expression. J. Biol. Chem. 279: 11088-11095. doi:10.1074/jbc. M312414200. PMID:14707122.
    • (2004) J. Biol. Chem , vol.279 , pp. 11088-11095
    • Cui, W.1    Tomarev, S.I.2    Piatigorsky, J.3    Chepelinsky, A.B.4    Duncan, M.K.5
  • 10
    • 7444233421 scopus 로고    scopus 로고
    • Regulation of gene expression by Pax6 in ocular cells: A case of tissue-preferred expression of crystallins in lens
    • PMID:15558475, doi:10.1387/ijdb.041866ac
    • Cvekl, A., Yang, Y., Chauhan, B.K., and Cveklova, K. 2004. Regulation of gene expression by Pax6 in ocular cells: a case of tissue-preferred expression of crystallins in lens. Int. J. Dev. Biol. 48: 829-844. doi:10.1387/ijdb.041866ac. PMID:15558475.
    • (2004) Int. J. Dev. Biol , vol.48 , pp. 829-844
    • Cvekl, A.1    Yang, Y.2    Chauhan, B.K.3    Cveklova, K.4
  • 11
    • 0027497970 scopus 로고
    • Molecular cloning and expression of cDNA for mammalian translation initiation factor 5
    • PMID:8464924, doi:10.1073/pnas.90.7.3058
    • Das, K., Chevesich, J., and Maitra, U. 1993. Molecular cloning and expression of cDNA for mammalian translation initiation factor 5. Proc. Natl. Acad. Sci. U.S.A. 90: 3058-3062. doi:10.1073/pnas.90.7.3058. PMID:8464924.
    • (1993) Proc. Natl. Acad. Sci. U.S.A , vol.90 , pp. 3058-3062
    • Das, K.1    Chevesich, J.2    Maitra, U.3
  • 12
    • 0037317182 scopus 로고    scopus 로고
    • An associative analysis of gene expression array data
    • PMID:12538240, doi:10.1093/ bioinformatics/19.2.204
    • Dozmorov, I., and Centola, M. 2003. An associative analysis of gene expression array data. Bioinformatics, 19: 204-211. doi:10.1093/ bioinformatics/19.2.204. PMID:12538240.
    • (2003) Bioinformatics , vol.19 , pp. 204-211
    • Dozmorov, I.1    Centola, M.2
  • 13
    • 16644377513 scopus 로고    scopus 로고
    • A high-throughput method for identifying N-ethyl-N-nitrosourea (ENU)-induced point mutations in zebrafish
    • PMID:15602907
    • Draper, B.W., McCallum, C.M., Stout, J.L., Slade, A.J., and Moens, C.B. 2004. A high-throughput method for identifying N-ethyl-N-nitrosourea (ENU)-induced point mutations in zebrafish. Methods Cell Biol. 77: 91-112. PMID:15602907.
    • (2004) Methods Cell Biol , vol.77 , pp. 91-112
    • Draper, B.W.1    McCallum, C.M.2    Stout, J.L.3    Slade, A.J.4    Moens, C.B.5
  • 14
    • 0030802114 scopus 로고    scopus 로고
    • Fadool, J.M., Brockerhoff, S.E., Hyatt, G.A., and Dowling, J.E. 1997. Mutations affecting eye morphology in the developing zebrafish (Danio rerio). Dev. Genet. 20: 288-295. doi:10.1002/(SICI)1520-6408(1997)20: 3〈288::AID-DVG11〉3.0.CO;2-4. PMID:9216068.
    • Fadool, J.M., Brockerhoff, S.E., Hyatt, G.A., and Dowling, J.E. 1997. Mutations affecting eye morphology in the developing zebrafish (Danio rerio). Dev. Genet. 20: 288-295. doi:10.1002/(SICI)1520-6408(1997)20: 3〈288::AID-DVG11〉3.0.CO;2-4. PMID:9216068.
  • 15
    • 0032893932 scopus 로고    scopus 로고
    • Preservation of duplicate genes by complementary, degenerative mutations
    • PMID:10101175
    • Force, A., Lynch, M., Pickett, F.B., Amores, A., Yan, Y.L., and Postlethwait, J. 1999. Preservation of duplicate genes by complementary, degenerative mutations. Genetics, 151: 1531-1545. PMID:10101175.
    • (1999) Genetics , vol.151 , pp. 1531-1545
    • Force, A.1    Lynch, M.2    Pickett, F.B.3    Amores, A.4    Yan, Y.L.5    Postlethwait, J.6
  • 16
    • 0035745796 scopus 로고    scopus 로고
    • Expression of pineal ultraviolet- and green-like opsins in the pineal organ and retina of teleosts
    • PMID:11511667
    • Forsell, J., Ekstrom, P., Flamarique, I.N., and Holmqvist, B. 2001. Expression of pineal ultraviolet- and green-like opsins in the pineal organ and retina of teleosts. J. Exp. Biol. 204: 2517-2525. PMID:11511667.
    • (2001) J. Exp. Biol , vol.204 , pp. 2517-2525
    • Forsell, J.1    Ekstrom, P.2    Flamarique, I.N.3    Holmqvist, B.4
  • 17
    • 33746441661 scopus 로고    scopus 로고
    • αA-crystallin expression prevents γ-crystallin insolubility and cataract formation in the zebrafish cloche mutant lens
    • PMID:16728471, doi:10.1242/dev.02424
    • Goishi, K., Shimizu, A., Najarro, G., Watanabe, S., Rogers, R., Zon, L.I., et al. 2006. αA-crystallin expression prevents γ-crystallin insolubility and cataract formation in the zebrafish cloche mutant lens. Development, 133: 2585-2593. doi:10.1242/dev.02424. PMID:16728471.
    • (2006) Development , vol.133 , pp. 2585-2593
    • Goishi, K.1    Shimizu, A.2    Najarro, G.3    Watanabe, S.4    Rogers, R.5    Zon, L.I.6
  • 18
    • 0037326951 scopus 로고    scopus 로고
    • The zebrafish as a tool for understanding the biology of visual disorders
    • PMID:12524002, doi:10.1016/S1084-9521(02)00167-2
    • Goldsmith, P., and Harris, W.A. 2003. The zebrafish as a tool for understanding the biology of visual disorders. Semin. Cell Dev. Biol. 14: 11-18. doi:10.1016/S1084-9521(02)00167-2. PMID:12524002.
    • (2003) Semin. Cell Dev. Biol , vol.14 , pp. 11-18
    • Goldsmith, P.1    Harris, W.A.2
  • 19
    • 20444401225 scopus 로고    scopus 로고
    • Identification of zebrafish insertional mutants with defects in visual system development and function
    • PMID:15716491, doi:10.1534/genetics.104.039727
    • Gross, J.M., Perkins, B.D., Amsterdam, A., Egana, A., Darland, T., Matsui, J.I., et al. 2005. Identification of zebrafish insertional mutants with defects in visual system development and function. Genetics, 170: 245-261. doi:10.1534/genetics.104.039727. PMID:15716491.
    • (2005) Genetics , vol.170 , pp. 245-261
    • Gross, J.M.1    Perkins, B.D.2    Amsterdam, A.3    Egana, A.4    Darland, T.5    Matsui, J.I.6
  • 20
    • 0027420885 scopus 로고
    • Evolution of HSP70 gene and its implications regarding relationships between archaebacteria, eubacteria, and eukaryotes
    • PMID:8114110, doi:10.1007/BF00182743
    • Gupta, R.S., and Golding, G.B. 1993. Evolution of HSP70 gene and its implications regarding relationships between archaebacteria, eubacteria, and eukaryotes. J. Mol. Evol. 37: 573-582. doi:10.1007/BF00182743. PMID:8114110.
    • (1993) J. Mol. Evol , vol.37 , pp. 573-582
    • Gupta, R.S.1    Golding, G.B.2
  • 21
    • 18144415460 scopus 로고    scopus 로고
    • Cardiovascular gene expression profiles of dioxin exposure in zebrafish embryos
    • PMID:15716485, doi:10.1093/toxsci/kfi116
    • Handley-Goldstone, H.M., Grow, M.W., and Stegeman, J.J. 2005. Cardiovascular gene expression profiles of dioxin exposure in zebrafish embryos. Toxicol. Sci. 85: 683-693. doi:10.1093/toxsci/kfi116. PMID:15716485.
    • (2005) Toxicol. Sci , vol.85 , pp. 683-693
    • Handley-Goldstone, H.M.1    Grow, M.W.2    Stegeman, J.J.3
  • 22
    • 12644283529 scopus 로고    scopus 로고
    • Genes involved in forebrain development in the zebrafish, Danio rerio
    • PMID:9007240
    • Heisenberg, C.P., Brand, M., Jiang, Y.J., Warga, R.M., Beuchle, D., van Eeden, F.J., et al. 1996. Genes involved in forebrain development in the zebrafish, Danio rerio. Development, 123: 191-203. PMID:9007240.
    • (1996) Development , vol.123 , pp. 191-203
    • Heisenberg, C.P.1    Brand, M.2    Jiang, Y.J.3    Warga, R.M.4    Beuchle, D.5    van Eeden, F.J.6
  • 23
    • 0034984056 scopus 로고    scopus 로고
    • A mutation in the Gsk3-binding domain of zebrafish Masterblind/Axin1 leads to a fate transformation of telencephalon and eyes to diencephalon
    • PMID:11390362, doi:10.1101/gad.194301
    • Heisenberg, C.P., Houart, C., Take-Uchi, M., Rauch, G.J., Young, N., Coutinho, P., et al. 2001. A mutation in the Gsk3-binding domain of zebrafish Masterblind/Axin1 leads to a fate transformation of telencephalon and eyes to diencephalon. Genes Dev. 15: 1427-1434. doi:10.1101/gad.194301. PMID:11390362.
    • (2001) Genes Dev , vol.15 , pp. 1427-1434
    • Heisenberg, C.P.1    Houart, C.2    Take-Uchi, M.3    Rauch, G.J.4    Young, N.5    Coutinho, P.6
  • 24
    • 0037325497 scopus 로고    scopus 로고
    • Alpha-crystallin
    • PMID:12565801, doi:10.1016/S0014-4835(02)00278-6
    • Horwitz, J. 2003. Alpha-crystallin. Exp. Eye Res. 76: 145-153. doi:10.1016/S0014-4835(02)00278-6. PMID:12565801.
    • (2003) Exp. Eye Res , vol.76 , pp. 145-153
    • Horwitz, J.1
  • 25
    • 0028342845 scopus 로고
    • The evolution of functionally novel proteins after gene duplication
    • PMID:8029240, doi:10.1098/rspb.1994.0058
    • Hughes, A.L. 1994. The evolution of functionally novel proteins after gene duplication. Proc. R. Soc. Biol. Sci. Ser. B, 256: 119-124. doi:10.1098/rspb.1994.0058. PMID:8029240.
    • (1994) Proc. R. Soc. Biol. Sci. Ser. B , vol.256 , pp. 119-124
    • Hughes, A.L.1
  • 26
    • 19944428767 scopus 로고    scopus 로고
    • Impaired channel targeting and retinal degeneration in mice lacking the cyclic nucleotide-gated channel subunit CNGB1
    • PMID:15634774, doi:10.1523/JNEUROSCI.3764-04.2005
    • Huttl, S., Michalakis, S., Seeliger, M., Luo, D.G., Acar, N., Geiger, H., et al. 2005. Impaired channel targeting and retinal degeneration in mice lacking the cyclic nucleotide-gated channel subunit CNGB1. J. Neurosci. 25: 130-138. doi:10.1523/JNEUROSCI.3764-04.2005. PMID:15634774.
    • (2005) J. Neurosci , vol.25 , pp. 130-138
    • Huttl, S.1    Michalakis, S.2    Seeliger, M.3    Luo, D.G.4    Acar, N.5    Geiger, H.6
  • 27
    • 7244259101 scopus 로고    scopus 로고
    • Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate protokaryotype
    • PMID:15496914, doi:10.1038/nature03025
    • Jaillon, O., Aury, J.M., Brunet, F., Petit, J.L., Stange-Thomann, N., Mauceli, E., et al. 2004. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate protokaryotype. Nature (London), 431: 946-957. doi:10.1038/nature03025. PMID:15496914.
    • (2004) Nature (London) , vol.431 , pp. 946-957
    • Jaillon, O.1    Aury, J.M.2    Brunet, F.3    Petit, J.L.4    Stange-Thomann, N.5    Mauceli, E.6
  • 28
    • 0027386243 scopus 로고
    • The zebrafish midblastula transition
    • PMID:8287796
    • Kane, D.A., and Kimmel, C.B. 1993. The zebrafish midblastula transition. Development, 119: 447-456. PMID:8287796.
    • (1993) Development , vol.119 , pp. 447-456
    • Kane, D.A.1    Kimmel, C.B.2
  • 30
    • 0028225137 scopus 로고
    • A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?
    • PMID:7518079, doi:10.1093/nar/22.11.2166
    • Koonin, E.V., Bork, P., and Sander, C. 1994. A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme? Nucleic Acids Res. 22: 2166-2167. doi:10.1093/nar/22.11.2166. PMID:7518079.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2166-2167
    • Koonin, E.V.1    Bork, P.2    Sander, C.3
  • 31
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • PMID:15260895, doi:10.1093/bib/5.2.150
    • Kumar, S., Tamura, K., and Nei, M. 2004. MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief. Bioinform. 5: 150-163. doi:10.1093/bib/5.2.150. PMID:15260895.
    • (2004) Brief. Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 32
    • 30544433311 scopus 로고    scopus 로고
    • Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression
    • PMID:16327811, doi:10.1038/nbt1169
    • Lam, S.H., Wu, Y.L., Vega, V.B., Miller, L.D., Spitsbergen, J., Tong, Y., et al. 2006. Conservation of gene expression signatures between zebrafish and human liver tumors and tumor progression. Nat. Biotechnol. 24: 73-75. doi:10.1038/nbt1169. PMID:16327811.
    • (2006) Nat. Biotechnol , vol.24 , pp. 73-75
    • Lam, S.H.1    Wu, Y.L.2    Vega, V.B.3    Miller, L.D.4    Spitsbergen, J.5    Tong, Y.6
  • 33
    • 7944222567 scopus 로고    scopus 로고
    • Microarray gene expression profiling during the segmentation phase of zebrafish development
    • doi:10.1016/j.cca.2004.08.008
    • Linney, E., Dobbs-McAuliffe, B., Sajadi, H., and Malek, R.L. 2004. Microarray gene expression profiling during the segmentation phase of zebrafish development. Comp. Biochem. Physiol. Part C Toxicol. Pharmacol. 138: 351-362. doi:10.1016/j.cca.2004.08.008.
    • (2004) Comp. Biochem. Physiol. Part C Toxicol. Pharmacol , vol.138 , pp. 351-362
    • Linney, E.1    Dobbs-McAuliffe, B.2    Sajadi, H.3    Malek, R.L.4
  • 34
    • 0037332486 scopus 로고    scopus 로고
    • 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis
    • PMID:12618376, doi:10.1101/gr.885403
    • Lo, J., Lee, S., Xu, M., Liu, F., Ruan, H., Eun, A., et al. 2003. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Genome Res. 13: 455-466. doi:10.1101/gr.885403. PMID:12618376.
    • (2003) Genome Res , vol.13 , pp. 455-466
    • Lo, J.1    Lee, S.2    Xu, M.3    Liu, F.4    Ruan, H.5    Eun, A.6
  • 36
    • 0031038064 scopus 로고    scopus 로고
    • floating head and masterblind regulate neuronal patterning in the roof of the forebrain
    • PMID:9010204, doi:10.1016/S0896-6273(01) 80045-3
    • Masai, I., Heisenberg, C.P., Barth, K.A., Macdonald, R., Adamek, S., and Wilson, S.W. 1997. floating head and masterblind regulate neuronal patterning in the roof of the forebrain. Neuron, 18: 43-57. doi:10.1016/S0896-6273(01) 80045-3. PMID:9010204.
    • (1997) Neuron , vol.18 , pp. 43-57
    • Masai, I.1    Heisenberg, C.P.2    Barth, K.A.3    Macdonald, R.4    Adamek, S.5    Wilson, S.W.6
  • 37
    • 30544437719 scopus 로고    scopus 로고
    • Transcriptome analysis of zebrafish embryogenesis using microarrays
    • PMID:16132083, doi:10.1371/journal.pgen.0010029
    • Mathavan, S., Lee, S.G., Mak, A., Miller, L.D., Murthy, K.R., Govindarajan, K.R., et al. 2005. Transcriptome analysis of zebrafish embryogenesis using microarrays. PLoS Genet, 1: 260-276. doi:10.1371/journal.pgen.0010029. PMID:16132083.
    • (2005) PLoS Genet , vol.1 , pp. 260-276
    • Mathavan, S.1    Lee, S.G.2    Mak, A.3    Miller, L.D.4    Murthy, K.R.5    Govindarajan, K.R.6
  • 38
    • 26244444380 scopus 로고    scopus 로고
    • From 2R to 3R: Evidence for a fish-specific genome duplication (FSGD)
    • PMID:16108068, doi:10.1002/bies.20293
    • Meyer, A., and Van de Peer, Y. 2005. From 2R to 3R: evidence for a fish-specific genome duplication (FSGD). Bioessays, 27: 937-945. doi:10.1002/bies.20293. PMID:16108068.
    • (2005) Bioessays , vol.27 , pp. 937-945
    • Meyer, A.1    Van de Peer, Y.2
  • 39
    • 20144389069 scopus 로고    scopus 로고
    • Differential activation profiles of multiple transcription factors during dendritic cell maturation
    • PMID:15816829, doi:10.1111/j.0022-202X.2005.23616.x
    • Mizumoto, N., Hui, F., Edelbaum, D., Weil, M.R., Wren, J.D., Shalhevet, D., et al. 2005. Differential activation profiles of multiple transcription factors during dendritic cell maturation. J. Invest. Dermatol. 124: 718-724. doi:10.1111/j.0022-202X.2005.23616.x. PMID:15816829.
    • (2005) J. Invest. Dermatol , vol.124 , pp. 718-724
    • Mizumoto, N.1    Hui, F.2    Edelbaum, D.3    Weil, M.R.4    Wren, J.D.5    Shalhevet, D.6
  • 40
    • 0033780376 scopus 로고    scopus 로고
    • Effective targeted gene 'knockdown' in zebrafish
    • PMID:11017081, doi:10.1038/79951
    • Nasevicius, A., and Ekker, S.C. 2000. Effective targeted gene 'knockdown' in zebrafish. Nat. Genet. 26: 216-220. doi:10.1038/79951. PMID:11017081.
    • (2000) Nat. Genet , vol.26 , pp. 216-220
    • Nasevicius, A.1    Ekker, S.C.2
  • 41
    • 0033215990 scopus 로고    scopus 로고
    • Genetic disorders of vision revealed by a behavioral screen of 400 essential loci in zebrafish
    • PMID:10493760
    • Neuhauss, S.C., Biehlmaier, O., Seeliger, M.W., Das, T., Kohler, K., Harris, W.A., et al. 1999. Genetic disorders of vision revealed by a behavioral screen of 400 essential loci in zebrafish. J. Neurosci. 19: 8603-8615. PMID:10493760.
    • (1999) J. Neurosci , vol.19 , pp. 8603-8615
    • Neuhauss, S.C.1    Biehlmaier, O.2    Seeliger, M.W.3    Das, T.4    Kohler, K.5    Harris, W.A.6
  • 42
    • 0030943821 scopus 로고    scopus 로고
    • Eukaryotic transcription factor-DNA complexes
    • PMID:9241421, doi:10.1146/annurev.biophys.26.1.289
    • Patikoglou, G., and Burley, S.K. 1997. Eukaryotic transcription factor-DNA complexes. Annu. Rev. Biophys. Biomol. Struct. 26: 289-325. doi:10.1146/annurev.biophys.26.1.289. PMID:9241421.
    • (1997) Annu. Rev. Biophys. Biomol. Struct , vol.26 , pp. 289-325
    • Patikoglou, G.1    Burley, S.K.2
  • 43
    • 4444340536 scopus 로고    scopus 로고
    • Subfunction partitioning, the teleost radiation and the annotation of the human genome
    • PMID:15363902, doi:10.1016/j.tig.2004.08.001
    • Postlethwait, J., Amores, A., Cresko, W., Singer, A., and Yan, Y.L. 2004. Subfunction partitioning, the teleost radiation and the annotation of the human genome. Trends Genet. 20: 481-490. doi:10.1016/j.tig.2004.08.001. PMID:15363902.
    • (2004) Trends Genet , vol.20 , pp. 481-490
    • Postlethwait, J.1    Amores, A.2    Cresko, W.3    Singer, A.4    Yan, Y.L.5
  • 44
    • 34948908604 scopus 로고    scopus 로고
    • The zebrafish genome in context: Ohnologs gone missing
    • Postlethwait, J.H. 2006. The zebrafish genome in context: ohnologs gone missing. J. Exp. Zoolog. B Mol. Dev. Evol. 208B: 563-577.
    • (2006) J. Exp. Zoolog. B Mol. Dev. Evol , vol.208 B , pp. 563-577
    • Postlethwait, J.H.1
  • 45
    • 18244431887 scopus 로고    scopus 로고
    • Vertebrate genome evolution and the zebrafish gene map
    • PMID:9537416, doi:10.1038/ng0498-345
    • Postlethwait, J.H., Yan, Y.L., Gates, M.A., Horne, S., Amores, A., Brownlie, A., et al. 1998. Vertebrate genome evolution and the zebrafish gene map. Nat. Genet. 18: 345-349. doi:10.1038/ng0498-345. PMID:9537416.
    • (1998) Nat. Genet , vol.18 , pp. 345-349
    • Postlethwait, J.H.1    Yan, Y.L.2    Gates, M.A.3    Horne, S.4    Amores, A.5    Brownlie, A.6
  • 46
    • 20744450725 scopus 로고    scopus 로고
    • Microarray analysis of zebrafish cloche mutant using amplified cDNA and identification of potential downstream target genes
    • PMID:15937927, doi:10.1002/dvdy.20444
    • Qian, F., Zhen, F., Ong, C., Jin, S.W., Meng Soo, H., Stainier, D.Y., et al. 2005. Microarray analysis of zebrafish cloche mutant using amplified cDNA and identification of potential downstream target genes. Dev. Dyn. 233: 1163-1172. doi:10.1002/dvdy.20444. PMID:15937927.
    • (2005) Dev. Dyn , vol.233 , pp. 1163-1172
    • Qian, F.1    Zhen, F.2    Ong, C.3    Jin, S.W.4    Meng Soo, H.5    Stainier, D.Y.6
  • 47
    • 0035957391 scopus 로고    scopus 로고
    • Regulation of eye development by frizzled signaling in Xenopus
    • PMID:11274406, doi:10.1073/pnas.071586298
    • Rasmussen, J.T., Deardorff, M.A., Tan, C., Rao, M.S., Klein, P.S., and Vetter, M.L. 2001. Regulation of eye development by frizzled signaling in Xenopus. Proc. Natl. Acad. Sci. U.S.A. 98: 3861-3866. doi:10.1073/pnas.071586298. PMID:11274406.
    • (2001) Proc. Natl. Acad. Sci. U.S.A , vol.98 , pp. 3861-3866
    • Rasmussen, J.T.1    Deardorff, M.A.2    Tan, C.3    Rao, M.S.4    Klein, P.S.5    Vetter, M.L.6
  • 48
    • 0027163937 scopus 로고
    • Zebrafish ultraviolet visual pigment: Absorption spectrum, sequence, and localization
    • PMID:8327475, doi:10.1073/pnas.90.13.6009
    • Robinson, J., Schmitt, E.A., Harosi, F.I., Reece, R.J., and Dowling, J.E. 1993. Zebrafish ultraviolet visual pigment: absorption spectrum, sequence, and localization. Proc. Natl. Acad. Sci. U.S.A. 90: 6009-6012. doi:10.1073/pnas.90.13.6009. PMID:8327475.
    • (1993) Proc. Natl. Acad. Sci. U.S.A , vol.90 , pp. 6009-6012
    • Robinson, J.1    Schmitt, E.A.2    Harosi, F.I.3    Reece, R.J.4    Dowling, J.E.5
  • 49
    • 0037607026 scopus 로고    scopus 로고
    • Phenotype of the zebrafish masterblind (mbl) mutant is dependent on genetic background
    • PMID: 12761856, doi:10.1002/dvdy.10308
    • Sanders, L.H., and Whitlock, K.E. 2003. Phenotype of the zebrafish masterblind (mbl) mutant is dependent on genetic background. Dev. Dyn. 227: 291-300. doi:10.1002/dvdy.10308. PMID: 12761856.
    • (2003) Dev. Dyn , vol.227 , pp. 291-300
    • Sanders, L.H.1    Whitlock, K.E.2
  • 50
    • 0030734660 scopus 로고    scopus 로고
    • Santacruz, H., Vriz, S., and Angelier, N. 1997. Molecular characterization of a heat shock cognate cDNA of zebrafish, hsc70, and developmental expression of the corresponding transcripts. Dev. Genet. 21: 223-233. doi:10.1002/(SICI)1520-6408(1997)21:3〈223::AID- DVG5〉3.0.CO;2-9. PMID:9397538.
    • Santacruz, H., Vriz, S., and Angelier, N. 1997. Molecular characterization of a heat shock cognate cDNA of zebrafish, hsc70, and developmental expression of the corresponding transcripts. Dev. Genet. 21: 223-233. doi:10.1002/(SICI)1520-6408(1997)21:3〈223::AID- DVG5〉3.0.CO;2-9. PMID:9397538.
  • 51
    • 0028306801 scopus 로고
    • Early eye morphogenesis in the zebrafish, Brachydanio rerio
    • PMID:7929890, doi:10.1002/cne.903440404
    • Schmitt, E.A., and Dowling, J.E. 1994. Early eye morphogenesis in the zebrafish, Brachydanio rerio. J. Comp. Neurol. 344: 532-542. doi:10.1002/cne.903440404. PMID:7929890.
    • (1994) J. Comp. Neurol , vol.344 , pp. 532-542
    • Schmitt, E.A.1    Dowling, J.E.2
  • 52
    • 0036844682 scopus 로고    scopus 로고
    • Pax6; a pleiotropic player in development
    • PMID:12386935, doi:10.1002/bies.10174
    • Simpson, T.I., and Price, D.J. 2002. Pax6; a pleiotropic player in development. Bioessays, 24: 1041-1051. doi:10.1002/bies.10174. PMID:12386935.
    • (2002) Bioessays , vol.24 , pp. 1041-1051
    • Simpson, T.I.1    Price, D.J.2
  • 53
    • 33644941793 scopus 로고    scopus 로고
    • Gene duplication and separation of functions in αB-crystallin from zebrafish (Danio rerio)
    • PMID:16420472, doi:10.1111/j.1742-4658.2005.05080.x
    • Smith, A.A., Wyatt, K., Vacha, J., Vihtelic, T.S., Zigler, J.S., Jr., Wistow, G.J., et al. 2006. Gene duplication and separation of functions in αB-crystallin from zebrafish (Danio rerio). FEBS J. 273: 481-490. doi:10.1111/j.1742-4658.2005.05080.x. PMID:16420472.
    • (2006) FEBS J , vol.273 , pp. 481-490
    • Smith, A.A.1    Wyatt, K.2    Vacha, J.3    Vihtelic, T.S.4    Zigler Jr., J.S.5    Wistow, G.J.6
  • 54
    • 22144448236 scopus 로고    scopus 로고
    • Identification of novel vascular endothelial-specific genes by the microarray analysis of the zebrafish cloche mutants
    • PMID:15802528, doi:10.1182/blood-2004-12-4653
    • Sumanas, S., Jorniak, T., and Lin, S. 2005. Identification of novel vascular endothelial-specific genes by the microarray analysis of the zebrafish cloche mutants. Blood, 106: 534-541. doi:10.1182/blood-2004-12-4653. PMID:15802528.
    • (2005) Blood , vol.106 , pp. 534-541
    • Sumanas, S.1    Jorniak, T.2    Lin, S.3
  • 55
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • PMID:9396791, doi:10.1093/nar/25.24.4876
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. doi:10.1093/nar/25.24.4876. PMID:9396791.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 56
    • 0036389722 scopus 로고    scopus 로고
    • Construction of a zebrafish cDNA microarray: Gene expression profiling of the zebrafish during development
    • PMID:12207891, doi:10.1016/S0006-291X(02)02010-7
    • Ton, C., Stamatiou, D., Dzau, V.J., and Liew, C.C. 2002. Construction of a zebrafish cDNA microarray: gene expression profiling of the zebrafish during development. Biochem. Biophys. Res. Commun. 296: 1134-1142. doi:10.1016/S0006-291X(02)02010-7. PMID:12207891.
    • (2002) Biochem. Biophys. Res. Commun , vol.296 , pp. 1134-1142
    • Ton, C.1    Stamatiou, D.2    Dzau, V.J.3    Liew, C.C.4
  • 57
    • 1242274629 scopus 로고    scopus 로고
    • Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates
    • PMID:14757817, doi:10.1073/pnas.0307968100
    • Vandepoele, K., De Vos, W., Taylor, J.S., Meyer, A., and Van de Peer, Y. 2004. Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates. Proc. Natl. Acad. Sci. U.S.A. 101: 1638-1643. doi:10.1073/pnas.0307968100. PMID:14757817.
    • (2004) Proc. Natl. Acad. Sci. U.S.A , vol.101 , pp. 1638-1643
    • Vandepoele, K.1    De Vos, W.2    Taylor, J.S.3    Meyer, A.4    Van de Peer, Y.5
  • 58
    • 22144490466 scopus 로고    scopus 로고
    • Development and application of a brain-specific cDNA microarray for effect evaluation of neuroactive pharmaceuticals in zebrafish (Danio rerio)
    • PMID:15979371, doi:10.1016/j.cbpc.2005.05.004
    • van der Ven, K., De Wit, M., Keil, D., Moens, L., Van Leemput, K., Naudts, B., et al. 2005. Development and application of a brain-specific cDNA microarray for effect evaluation of neuroactive pharmaceuticals in zebrafish (Danio rerio). Comp. Biochem. Physiol. B Biochem. Mol. Biol. 141: 408-417. doi:10.1016/j.cbpc.2005.05.004. PMID:15979371.
    • (2005) Comp. Biochem. Physiol. B Biochem. Mol. Biol , vol.141 , pp. 408-417
    • van der Ven, K.1    De Wit, M.2    Keil, D.3    Moens, L.4    Van Leemput, K.5    Naudts, B.6
  • 59
    • 0034755394 scopus 로고    scopus 로고
    • Ectopic Wnt signal determines the eyeless phenotype of zebrafish masterblind mutant
    • PMID:11641213
    • van de Water, S., van de Wetering, M., Joore, J., Esseling, J., Bink, R., Clevers, H., et al. 2001. Ectopic Wnt signal determines the eyeless phenotype of zebrafish masterblind mutant. Development, 128: 3877-3888. PMID:11641213.
    • (2001) Development , vol.128 , pp. 3877-3888
    • van de Water, S.1    van de Wetering, M.2    Joore, J.3    Esseling, J.4    Bink, R.5    Clevers, H.6
  • 60
    • 33749235896 scopus 로고    scopus 로고
    • Nitric oxide synthase in retina and optic nerve head of rat with increased intraocular pressure and effect of timolol
    • PMID:17027776, doi:10.1016/j.brainresbull.2006.07.009
    • Vidal, L., Diaz, F., Villena, A., Moreno, M., Campos, J.G., and de Vargas, I.P. 2006. Nitric oxide synthase in retina and optic nerve head of rat with increased intraocular pressure and effect of timolol. Brain Res. Bull. 70: 406-413. doi:10.1016/j.brainresbull.2006.07.009. PMID:17027776.
    • (2006) Brain Res. Bull , vol.70 , pp. 406-413
    • Vidal, L.1    Diaz, F.2    Villena, A.3    Moreno, M.4    Campos, J.G.5    de Vargas, I.P.6
  • 61
    • 0033136341 scopus 로고    scopus 로고
    • Cloning and characterization of six zebrafish photoreceptor opsin cDNAs and immunolocalization of their corresponding proteins
    • PMID:10349976, doi:10.1017/S0952523899163168
    • Vihtelic, T.S., Doro, C.J., and Hyde, D.R. 1999. Cloning and characterization of six zebrafish photoreceptor opsin cDNAs and immunolocalization of their corresponding proteins. Vis. Neurosci. 16: 571-585. doi:10.1017/S0952523899163168. PMID:10349976.
    • (1999) Vis. Neurosci , vol.16 , pp. 571-585
    • Vihtelic, T.S.1    Doro, C.J.2    Hyde, D.R.3
  • 62
    • 29244462807 scopus 로고    scopus 로고
    • Expressed sequence tag analysis of zebrafish eye tissues for NEIBank
    • PMID:16379021
    • Vihtelic, T.S., Fadool, J.M., Gao, J., Thornton, K.A., Hyde, D.R., and Wistow, G. 2005. Expressed sequence tag analysis of zebrafish eye tissues for NEIBank. Mol. Vis. 11: 1083-1100. PMID:16379021.
    • (2005) Mol. Vis , vol.11 , pp. 1083-1100
    • Vihtelic, T.S.1    Fadool, J.M.2    Gao, J.3    Thornton, K.A.4    Hyde, D.R.5    Wistow, G.6
  • 63
    • 34848818005 scopus 로고    scopus 로고
    • Heme regulates exocrine peptidase precursor genes in zebrafish
    • PMID:17895525, doi:10.3181/0703-RM-77
    • Wang, H., Zhou, Q., Kesinger, J.W., Norris, C., and Valdez, C. 2007. Heme regulates exocrine peptidase precursor genes in zebrafish. Exp. Biol. Med. 232: 1170-1180. doi:10.3181/0703-RM-77. PMID:17895525.
    • (2007) Exp. Biol. Med , vol.232 , pp. 1170-1180
    • Wang, H.1    Zhou, Q.2    Kesinger, J.W.3    Norris, C.4    Valdez, C.5
  • 64
    • 22144452921 scopus 로고    scopus 로고
    • Mutant-specific gene programs in the zebrafish
    • PMID:15827125, doi:10.1182/blood-2004-11-4541
    • Weber, G.J., Choe, S.E., Dooley, K.A., Paffett-Lugassy, N.N., Zhou, Y., and Zon, L.I. 2005. Mutant-specific gene programs in the zebrafish. Blood, 106: 521-530. doi:10.1182/blood-2004-11-4541. PMID:15827125.
    • (2005) Blood , vol.106 , pp. 521-530
    • Weber, G.J.1    Choe, S.E.2    Dooley, K.A.3    Paffett-Lugassy, N.N.4    Zhou, Y.5    Zon, L.I.6
  • 65
    • 11244291308 scopus 로고    scopus 로고
    • Genome-wide identification of female-enriched genes in zebrafish
    • PMID:15580633, doi:10.1002/dvdy.20210
    • Wen, C., Zhang, Z., Ma, W., Xu, M., Wen, Z., and Peng, J. 2005. Genome-wide identification of female-enriched genes in zebrafish. Dev. Dyn. 232: 171-179. doi:10.1002/dvdy.20210. PMID:15580633.
    • (2005) Dev. Dyn , vol.232 , pp. 171-179
    • Wen, C.1    Zhang, Z.2    Ma, W.3    Xu, M.4    Wen, Z.5    Peng, J.6
  • 67
    • 16644396292 scopus 로고    scopus 로고
    • Target-selected gene inactivation in zebrafish
    • PMID:15602906
    • Wienholds, E., and Plasterk, R.H. 2004. Target-selected gene inactivation in zebrafish. Methods Cell Biol. 77: 69-90. PMID:15602906.
    • (2004) Methods Cell Biol , vol.77 , pp. 69-90
    • Wienholds, E.1    Plasterk, R.H.2
  • 68
    • 0023917935 scopus 로고
    • Lens crystallins: The evolution and expression of proteins for a highly specialized tissue
    • PMID:3052280, doi:10.1146/annurev.bi.57. 070188.002403
    • Wistow, G.J., and Piatigorsky, J. 1988. Lens crystallins: the evolution and expression of proteins for a highly specialized tissue. Annu. Rev. Biochem. 57: 479-504. doi:10.1146/annurev.bi.57. 070188.002403. PMID:3052280.
    • (1988) Annu. Rev. Biochem , vol.57 , pp. 479-504
    • Wistow, G.J.1    Piatigorsky, J.2
  • 69
    • 1042269463 scopus 로고    scopus 로고
    • Shared relationship analysis: Ranking set cohesion and commonalities within a literature-derived relationship network
    • PMID:14734310, doi:10.1093/bioinformatics/btg390
    • Wren, J.D., and Garner, H.R. 2004. Shared relationship analysis: ranking set cohesion and commonalities within a literature-derived relationship network. Bioinformatics, 20: 191-198. doi:10.1093/bioinformatics/btg390. PMID:14734310.
    • (2004) Bioinformatics , vol.20 , pp. 191-198
    • Wren, J.D.1    Garner, H.R.2
  • 70
    • 1342330525 scopus 로고    scopus 로고
    • Knowledge discovery by automated identification and ranking of implicit relationships
    • PMID:14960466, doi:10.1093/ bioinformatics/btg421
    • Wren, J.D., Bekeredjian, R., Stewart, J.A., Shohet, R.V., and Garner, H.R. 2004. Knowledge discovery by automated identification and ranking of implicit relationships. Bioinformatics, 20: 389-398. doi:10.1093/ bioinformatics/btg421. PMID:14960466.
    • (2004) Bioinformatics , vol.20 , pp. 389-398
    • Wren, J.D.1    Bekeredjian, R.2    Stewart, J.A.3    Shohet, R.V.4    Garner, H.R.5
  • 71
    • 27644470293 scopus 로고    scopus 로고
    • A microarray study of MPP+-treated PC12 cells: Mechanisms of toxicity (MOT) analysis using bioinformatics tools
    • PMID:16026605, doi:10.1186/1471-2105-6-S2-S8
    • Xu, Z., Patterson, T.A., Wren, J.D., Han, T., Shi, L., Duhart, H., et al. 2005. A microarray study of MPP+-treated PC12 cells: mechanisms of toxicity (MOT) analysis using bioinformatics tools. BMC Bioinformatics, 6(Suppl. 2): S8. doi:10.1186/1471-2105-6-S2-S8. PMID:16026605.
    • (2005) BMC Bioinformatics , vol.6 , Issue.SUPPL. 2
    • Xu, Z.1    Patterson, T.A.2    Wren, J.D.3    Han, T.4    Shi, L.5    Duhart, H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.