메뉴 건너뛰기




Volumn 13, Issue 3, 2003, Pages 455-466

15,000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA;

EID: 0037332486     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.885403     Document Type: Article
Times cited : (130)

References (40)
  • 2
    • 0034928842 scopus 로고    scopus 로고
    • Photo-mediated gene activation using caged RNA/DNA in zebrafish embryos
    • Ando, H., Furuta, T., Tsien, R.Y., and Okamoto, H. 2001. Photo-mediated gene activation using caged RNA/DNA in zebrafish embryos. Nat. Genet. 28: 317-325.
    • (2001) Nat. Genet. , vol.28 , pp. 317-325
    • Ando, H.1    Furuta, T.2    Tsien, R.Y.3    Okamoto, H.4
  • 3
    • 0034081860 scopus 로고    scopus 로고
    • The zebrafish slow-muscle-omitted gene product is required for Hedgehog signal transduction and the development of slow muscle identity
    • Barresi, M.J.F., Stickney, H.L., and Devoto, S.H. 2000. The zebrafish slow-muscle-omitted gene product is required for Hedgehog signal transduction and the development of slow muscle identity. Development 127: 2189-2199.
    • (2000) Development , vol.127 , pp. 2189-2199
    • Barresi, M.J.F.1    Stickney, H.L.2    Devoto, S.H.3
  • 7
    • 1842271191 scopus 로고
    • Characterization of the cDNA encoding a protein binding to the major histocompatibility complex class II Y box
    • Didier, D.K., Schiffenbauer, J., Woulfe, S.L., Zacheis, M., and Schwartz, B.D. 1988. Characterization of the cDNA encoding a protein binding to the major histocompatibility complex class II Y box. Proc. Natl. Acad. Sci. 85: 7322-7326.
    • (1988) Proc. Natl. Acad. Sci. , vol.85 , pp. 7322-7326
    • Didier, D.K.1    Schiffenbauer, J.2    Woulfe, S.L.3    Zacheis, M.4    Schwartz, B.D.5
  • 8
    • 0034068307 scopus 로고    scopus 로고
    • Zebrafish: A model system for the study of human disease
    • Dooley, K. and Zon, L.I. 2000. Zebrafish: A model system for the study of human disease. Curr. Opin. Genet. Dev. 10: 252-256.
    • (2000) Curr. Opin. Genet. Dev. , vol.10 , pp. 252-256
    • Dooley, K.1    Zon, L.I.2
  • 10
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • Eisen, M., Spellman, P., Brown, P., and Botstein, D. 1998. Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci. 95: 14863-14868.
    • (1998) Proc. Natl. Acad. Sci. , vol.95 , pp. 14863-14868
    • Eisen, M.1    Spellman, P.2    Brown, P.3    Botstein, D.4
  • 11
    • 0035979735 scopus 로고    scopus 로고
    • Patterns of gene expression during Drosophila mesoderm development
    • Furlong, E.E.M., Anderson, E.C., Null, B., White, K.P., and Scott. M.P. 2001. Patterns of gene expression during Drosophila mesoderm development. Science 293: 1629-1633.
    • (2001) Science , vol.293 , pp. 1629-1633
    • Furlong, E.E.M.1    Anderson, E.C.2    Null, B.3    White, K.P.4    Scott, M.P.5
  • 12
    • 0026595077 scopus 로고
    • Unusual DNA binding characteristics of an in vitro translation product of the CCAAT binding protein mYB-1
    • Gai, X.X., Lipson, K.E., and Prystowsky, M.B. 1992. Unusual DNA binding characteristics of an in vitro translation product of the CCAAT binding protein mYB-1. Nucleic Acids Res. 20: 601-606.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 601-606
    • Gai, X.X.1    Lipson, K.E.2    Prystowsky, M.B.3
  • 15
    • 0027156870 scopus 로고
    • Cloning and characterization of the chicken YB-1: Regulation of expression in liver
    • Grant, C.E. and Deeley, R.G. 1993. Cloning and characterization of the chicken YB-1: Regulation of expression in liver. Mol. Cell. Biol. 13: 4186-4196.
    • (1993) Mol. Cell. Biol. , vol.13 , pp. 4186-4196
    • Grant, C.E.1    Deeley, R.G.2
  • 17
    • 0027423420 scopus 로고
    • Induction of muscle pioneers and floor plate is distinguished by the zebrafish no tail mutation
    • Halpern, M.E., Ho, R.K., Walker, C., and Kimmel, C.B. 1993. Induction of muscle pioneers and floor plate is distinguished by the zebrafish no tail mutation. Cell 75: 99-111.
    • (1993) Cell , vol.75 , pp. 99-111
    • Halpern, M.E.1    Ho, R.K.2    Walker, C.3    Kimmel, C.B.4
  • 18
    • 0004129673 scopus 로고    scopus 로고
    • Tissue in situ hybridization: Methods in animal development
    • John Wiley & Sons, New York. NY
    • Jowett, T. 1997. Tissue in situ hybridization: Methods in animal development. John Wiley & Sons, New York. NY.
    • (1997)
    • Jowett, T.1
  • 19
    • 0033558211 scopus 로고    scopus 로고
    • Comparative synteny cloning of zebfafish You-too: Mutations in the hedgehog target gli2 affect ventral forebrain patterning
    • Karlstrom, R.O.,Talbot, W.S., and Schier, A.F. 1999. Comparative synteny cloning of zebfafish You-too: Mutations in the hedgehog target gli2 affect ventral forebrain patterning. Genes & Dev. 13: 388-393.
    • (1999) Genes & Dev. , vol.13 , pp. 388-393
    • Karlstrom, R.O.1    Talbot, W.S.2    Schier, A.F.3
  • 22
    • 0025158595 scopus 로고
    • An "equalized cDNA library" by the reassociation of short double stranded cDNAs
    • Ko, M.S.H. 1990. An "equalized cDNA library" by the reassociation of short double stranded cDNAs. Nucleic Acids Res. 18: 5705-5711.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 5705-5711
    • Ko, M.S.H.1
  • 23
    • 0036500168 scopus 로고    scopus 로고
    • Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition
    • Lee, S.C., Cheng, H., King, K.E., Wang, W., He, Y., Hussian, A., Lo, J., Harberd, N.P., and Peng, J.R. 2002. Gibberellin regulates Arabidopsis seed germination via RGL2, a GAI/RGA-like gene whose expression is up-regulated following imbibition. Genes & Dev. 16: 646-658.
    • (2002) Genes & Dev. , vol.16 , pp. 646-658
    • Lee, S.C.1    Cheng, H.2    King, K.E.3    Wang, W.4    He, Y.5    Hussian, A.6    Lo, J.7    Harberd, N.P.8    Peng, J.R.9
  • 24
    • 0034650510 scopus 로고    scopus 로고
    • Double-strandred RNA injection produces null phenotype in zebrafish
    • Li, Y-X., Farrell, M.J., Liu, R-P., Mohanty, N., and Kirby M.L. 2000. Double-strandred RNA injection produces null phenotype in zebrafish. Dev. Biol. 217: 394-405.
    • (2000) Dev. Biol. , vol.217 , pp. 394-405
    • Li, Y.-X.1    Farrell, M.J.2    Liu, R.-P.3    Mohanty, N.4    Kirby, M.L.5
  • 25
    • 0034926078 scopus 로고    scopus 로고
    • Large-scale cDNA analysis of the maternal genetic information in the egg of Halocynthia roretzi for a gene expression catalog of ascidian development
    • Makabe, K.W., Kawashima, T., Kawashima, S., Minokawa,T., Adachi, A., Kawamura, H., Ishikawa, H., Yasuda, R., Yamamoto, H., Kondoh, K., et al. 2001. Large-scale cDNA analysis of the maternal genetic information in the egg of Halocynthia roretzi for a gene expression catalog of ascidian development. Development 128: 2555-2567.
    • (2001) Development , vol.128 , pp. 2555-2567
    • Makabe, K.W.1    Kawashima, T.2    Kawashima, S.3    Minokawa, T.4    Adachi, A.5    Kawamura, H.6    Ishikawa, H.7    Yasuda, R.8    Yamamoto, H.9    Kondoh, K.10
  • 26
    • 0035977158 scopus 로고    scopus 로고
    • Microarray analysis and organization of circadian gene expression in Drosophila
    • McDonald, M.J. and Rosbash, M. 2001. Microarray analysis and organization of circadian gene expression in Drosophila. Cell 107: 567-578.
    • (2001) Cell , vol.107 , pp. 567-578
    • McDonald, M.J.1    Rosbash, M.2
  • 27
    • 0033780376 scopus 로고    scopus 로고
    • Effective targeted gene "knockdown" in zebrafish
    • Nasevicius, A. and Ekker, S.C. 2000. Effective targeted gene "knockdown" in zebrafish. Nat. Genet. 26: 216-220.
    • (2000) Nat. Genet. , vol.26 , pp. 216-220
    • Nasevicius, A.1    Ekker, S.C.2
  • 28
    • 0026063987 scopus 로고
    • Construction of a uniform abundance (normalized) cDNA library
    • Patanjali, S.R., Parimoo, S., and Weissman, S.M. 1991. Construction of a uniform abundance (normalized) cDNA library. Proc. Natl. Acad. Sci. 88: 1943-1947.
    • (1991) Proc. Natl. Acad. Sci. , vol.88 , pp. 1943-1947
    • Patanjali, S.R.1    Parimoo, S.2    Weissman, S.M.3
  • 30
    • 0035876150 scopus 로고    scopus 로고
    • The u-boot mutation identifies a Hedgehog-regulated myogenic switch for fiber-type diversification in the zebrafish embryo
    • Roy, S., Wolff, C., and Ingham, P.W. 2001. The u-boot mutation identifies a Hedgehog-regulated myogenic switch for fiber-type diversification in the zebrafish embryo. Genes & Dev. 15: 1563-1576.
    • (2001) Genes & Dev. , vol.15 , pp. 1563-1576
    • Roy, S.1    Wolff, C.2    Ingham, P.W.3
  • 33
    • 0019452034 scopus 로고
    • Production of clones of homozygous diploid zebrafish (Brachydanio rerio)
    • Streisinger, G., Walker, C., Dower, N., Knauber, D., and Singer, F. 1981. Production of clones of homozygous diploid zebrafish (Brachydanio rerio). Nature 291: 293-296.
    • (1981) Nature , vol.291 , pp. 293-296
    • Streisinger, G.1    Walker, C.2    Dower, N.3    Knauber, D.4    Singer, F.5
  • 34
    • 0022666826 scopus 로고
    • Segregation analyses and gene-centromere distances in zebrafish
    • Streisinger, G., Singer, F., Walker, C., Knauber, D., and Dower, N. 1986. Segregation analyses and gene-centromere distances in zebrafish. Genetics 112: 311-319.
    • (1986) Genetics , vol.112 , pp. 311-319
    • Streisinger, G.1    Singer, F.2    Walker, C.3    Knauber, D.4    Dower, N.5
  • 35
    • 0034175544 scopus 로고    scopus 로고
    • Zebrafish mutations and functional analysis of the vertebrate genome
    • Talbot, W.S. and Hopkins, N. 2000. Zebrafish mutations and functional analysis of the vertebrate genome. Genes & Dev. 14: 755-762.
    • (2000) Genes & Dev. , vol.14 , pp. 755-762
    • Talbot, W.S.1    Hopkins, N.2
  • 37
    • 0031443541 scopus 로고    scopus 로고
    • A ribozyme-mediated, gene "knock-down" strategy for the identification of gene function in zebrafish
    • Xie, Y.F., Chen, X., and Wagner, T.E. 1997. A ribozyme-mediated, gene "knock-down" strategy for the identification of gene function in zebrafish. Proc. Natl. Acad. Sci. 94: 13777-13781.
    • (1997) Proc. Natl. Acad. Sci. , vol.94 , pp. 13777-13781
    • Xie, Y.F.1    Chen, X.2    Wagner, T.E.3
  • 38
    • 0033774310 scopus 로고    scopus 로고
    • Asynchronous activation of 10 muscle-specific protein (MSP) genes during zebrafish somitogenesis
    • Xu, Y-F., He, J-Y,, Wang, X-K., Lim, T-M., and Gong, Z-Y. 2000. Asynchronous activation of 10 muscle-specific protein (MSP) genes during zebrafish somitogenesis. Dev. Dyn. 219: 201-215.
    • (2000) Dev. Dyn. , vol.219 , pp. 201-215
    • Xu, Y.-F.1    He, J.-Y.2    Wang, X.-K.3    Lim, T.-M.4    Gong, Z.-Y.5
  • 39
    • 0034869983 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data
    • SPIE. BiOS 2001, San Jose, CA
    • Yang, Y.H., Dudoit, S., Luu, P., and Speed, T.P. 2001. Normalization for cDNA microarray data. SPIE BiOS 2001, San Jose, CA. http://www.stat.berkeley.edu/users/terry/zarray/Html/papersindex.html
    • (2001)
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Speed, T.P.4
  • 40
    • 0032559307 scopus 로고    scopus 로고
    • Positional cloning identifies zebrafish one-eyed pinhead as a permissive EGF-related ligand required during gastrulation
    • Zhang, J., Talbot, W.S., and Schier, A.F. 1998. Positional cloning identifies zebrafish one-eyed pinhead as a permissive EGF-related ligand required during gastrulation. Cell 92: 241-251.
    • (1998) Cell , vol.92 , pp. 241-251
    • Zhang, J.1    Talbot, W.S.2    Schier, A.F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.