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Volumn 71, Issue 3, 2008, Pages 1183-1196

New insights of membrane environment effects on MscL channel mechanics from theoretical approaches

Author keywords

Essential dynamics; Hydrophobic mismatch; Mechanosensitivity; Membrane protein; Model membrane; Molecular dynamics; Normal mode analysis

Indexed keywords

LIPID; MEMBRANE PROTEIN; MSCL PROTEIN; PROTEIN; SOLVENT; UNCLASSIFIED DRUG;

EID: 42449087270     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21810     Document Type: Article
Times cited : (17)

References (67)
  • 1
    • 14444277712 scopus 로고    scopus 로고
    • Release of thioredoxin via the mechanosensitive channel MscL during osmotic downshock of Escherichia coli cells
    • Ajouz B, Berrier C, Garrigues A, Besnard M, Ghazi A. Release of thioredoxin via the mechanosensitive channel MscL during osmotic downshock of Escherichia coli cells. J Biol Chem 1998;273:26670-26674.
    • (1998) J Biol Chem , vol.273 , pp. 26670-26674
    • Ajouz, B.1    Berrier, C.2    Garrigues, A.3    Besnard, M.4    Ghazi, A.5
  • 2
    • 27944484440 scopus 로고    scopus 로고
    • Osmotic shock: A mechanosensitive channel blocker can prevent release of cytoplasmic but not periplasmic proteins
    • Ewis HE, Lu CD. Osmotic shock: a mechanosensitive channel blocker can prevent release of cytoplasmic but not periplasmic proteins. FEMS Microbiol Lett 2005;253:295-301.
    • (2005) FEMS Microbiol Lett , vol.253 , pp. 295-301
    • Ewis, H.E.1    Lu, C.D.2
  • 3
    • 0031151230 scopus 로고    scopus 로고
    • A mechanosensitive channel protein and its gene in E. coli
    • Blount P, Sukharev S, Kung C. A mechanosensitive channel protein and its gene in E. coli. Gravit Space Biol Bull 1997;10:43-47.
    • (1997) Gravit Space Biol Bull , vol.10 , pp. 43-47
    • Blount, P.1    Sukharev, S.2    Kung, C.3
  • 4
    • 0029909197 scopus 로고    scopus 로고
    • Single residue substitutions that change the gating properties of a mechanosensitive channel in Escherichia coli
    • Blount P, Sukharev SI, Schroeder MJ, Nagle SK, Kung C. Single residue substitutions that change the gating properties of a mechanosensitive channel in Escherichia coli. Proc Natl Acad Sci USA 1996;93:11652-11657.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 11652-11657
    • Blount, P.1    Sukharev, S.I.2    Schroeder, M.J.3    Nagle, S.K.4    Kung, C.5
  • 5
    • 0031463940 scopus 로고    scopus 로고
    • Mutations in a bacterial mechanosensitive channel change the cellular response to osmotic stress
    • Blount P, Schroeder MJ, Kung C. Mutations in a bacterial mechanosensitive channel change the cellular response to osmotic stress. J Biol Chem 1997;272:32150-32157.
    • (1997) J Biol Chem , vol.272 , pp. 32150-32157
    • Blount, P.1    Schroeder, M.J.2    Kung, C.3
  • 6
    • 0030866749 scopus 로고    scopus 로고
    • Estimation of the pore size of the large-conductance mechanosensitive ion channel of Escherichia coli
    • Cruickshank CC, Minchin RF, Le Dain AC, Martinac B. Estimation of the pore size of the large-conductance mechanosensitive ion channel of Escherichia coli. Biophys J 1997;73:1925-1931.
    • (1997) Biophys J , vol.73 , pp. 1925-1931
    • Cruickshank, C.C.1    Minchin, R.F.2    Le Dain, A.C.3    Martinac, B.4
  • 7
    • 0030922654 scopus 로고    scopus 로고
    • Molecular dissection of the large mechanosensitive ion channel (MscL) of E. coli: Mutants with altered channel gating and pressure sensitivity
    • Hase CC, Le Dain AC, Martinac B. Molecular dissection of the large mechanosensitive ion channel (MscL) of E. coli: mutants with altered channel gating and pressure sensitivity. J Membr Biol 1997; 157:17-25.
    • (1997) J Membr Biol , vol.157 , pp. 17-25
    • Hase, C.C.1    Le Dain, A.C.2    Martinac, B.3
  • 8
    • 0031587748 scopus 로고    scopus 로고
    • Cross-linking studies and membrane localization and assembly of radiolabelled large mechanosensitive ion channel (MscL) of Escherichia coli
    • Hase CC, Minchin RF, Kloda A, Martinac B. Cross-linking studies and membrane localization and assembly of radiolabelled large mechanosensitive ion channel (MscL) of Escherichia coli. Biochem Biophys Res Commun 1997;232:777-782.
    • (1997) Biochem Biophys Res Commun , vol.232 , pp. 777-782
    • Hase, C.C.1    Minchin, R.F.2    Kloda, A.3    Martinac, B.4
  • 9
    • 0032530833 scopus 로고    scopus 로고
    • One face of a transmembrane helix is crucial in mechanosensitive channel gating
    • Ou X, Blount P, Hoffman RJ, Kung C. One face of a transmembrane helix is crucial in mechanosensitive channel gating. Proc Natl Acad Sci USA 1998;95:11471-11475.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 11471-11475
    • Ou, X.1    Blount, P.2    Hoffman, R.J.3    Kung, C.4
  • 10
    • 0032935824 scopus 로고    scopus 로고
    • Energetic and spatial parameters for gating of the bacterial large conductance mechanosensitive channel, MscL
    • Sukharev SI, Sigurdson WJ, Kung C, Sachs F. Energetic and spatial parameters for gating of the bacterial large conductance mechanosensitive channel, MscL. J Gen Physiol 1999;113:525-540.
    • (1999) J Gen Physiol , vol.113 , pp. 525-540
    • Sukharev, S.I.1    Sigurdson, W.J.2    Kung, C.3    Sachs, F.4
  • 11
    • 0032826458 scopus 로고    scopus 로고
    • Hydrophilicity of a single residue within MscL correlates with increased channel mechanosensitivity
    • Yoshimura K, Batiza A, Schroeder M, Blount P, Kung C. Hydrophilicity of a single residue within MscL correlates with increased channel mechanosensitivity. Biophys J 1999;77:1960-1972.
    • (1999) Biophys J , vol.77 , pp. 1960-1972
    • Yoshimura, K.1    Batiza, A.2    Schroeder, M.3    Blount, P.4    Kung, C.5
  • 12
    • 0033957169 scopus 로고    scopus 로고
    • Contributions of the different extramembranous domains of the mechanosensitive ion channel MscL to its response to membrane tension
    • Ajouz B, Berrier C, Besnard M, Martinac B, Ghazi A. Contributions of the different extramembranous domains of the mechanosensitive ion channel MscL to its response to membrane tension. J Biol Chem 2000;275:1015-1022.
    • (2000) J Biol Chem , vol.275 , pp. 1015-1022
    • Ajouz, B.1    Berrier, C.2    Besnard, M.3    Martinac, B.4    Ghazi, A.5
  • 13
    • 0034884665 scopus 로고    scopus 로고
    • Site-directed spin-labeling analysis of reconstituted Mscl in the closed state
    • Perozo E, Kloda A, Cortes DM, Martinac B. Site-directed spin-labeling analysis of reconstituted Mscl in the closed state. J Gen Physiol 2001;118:193-206.
    • (2001) J Gen Physiol , vol.118 , pp. 193-206
    • Perozo, E.1    Kloda, A.2    Cortes, D.M.3    Martinac, B.4
  • 14
    • 0035035068 scopus 로고    scopus 로고
    • Chemically charging the pore constriction opens the mechanosensitive channel MscL
    • Yoshimura K, Batiza A, Kung C. Chemically charging the pore constriction opens the mechanosensitive channel MscL. Biophys J 2001; 80:2198-2206.
    • (2001) Biophys J , vol.80 , pp. 2198-2206
    • Yoshimura, K.1    Batiza, A.2    Kung, C.3
  • 15
    • 2142708147 scopus 로고    scopus 로고
    • Cysteine scanning of MscL transmembrane domains reveals residues critical for mechanosensitive channel gating
    • Levin G, Blount P. Cysteine scanning of MscL transmembrane domains reveals residues critical for mechanosensitive channel gating. Biophys J 2004;86:2862-2870.
    • (2004) Biophys J , vol.86 , pp. 2862-2870
    • Levin, G.1    Blount, P.2
  • 16
    • 3242889840 scopus 로고    scopus 로고
    • Intragenic suppression of gain-of-function mutations in the Escherichia coli mechanosensitive channel, MscL
    • Li Y, Wray R, Blount P. Intragenic suppression of gain-of-function mutations in the Escherichia coli mechanosensitive channel, MscL. Mol Microbiol 2004;53:485-495.
    • (2004) Mol Microbiol , vol.53 , pp. 485-495
    • Li, Y.1    Wray, R.2    Blount, P.3
  • 17
    • 1942487703 scopus 로고    scopus 로고
    • Purification and functional reconstitution of N- and C-halves of the MscL channel
    • Park KH, Berrier C, Martinac B, Ghazi A. Purification and functional reconstitution of N- and C-halves of the MscL channel. Biophys J 2004;86:2129-2136.
    • (2004) Biophys J , vol.86 , pp. 2129-2136
    • Park, K.H.1    Berrier, C.2    Martinac, B.3    Ghazi, A.4
  • 18
    • 1942423623 scopus 로고    scopus 로고
    • Loss-of-function mutations at the rim of the funnel of mechanosensitive channel MscL
    • Yoshimura K, Nomura T, Sokabe M. Loss-of-function mutations at the rim of the funnel of mechanosensitive channel MscL. Biophys J 2004;86:2113-2120.
    • (2004) Biophys J , vol.86 , pp. 2113-2120
    • Yoshimura, K.1    Nomura, T.2    Sokabe, M.3
  • 19
    • 24944467312 scopus 로고    scopus 로고
    • Capping transmembrane helices of MscL with aromatic residues changes channel response to membrane stretch
    • Chiang CS, Shirinian L, Sukharev S. Capping transmembrane helices of MscL with aromatic residues changes channel response to membrane stretch. Biochemistry 2005;44:12589-12597.
    • (2005) Biochemistry , vol.44 , pp. 12589-12597
    • Chiang, C.S.1    Shirinian, L.2    Sukharev, S.3
  • 20
    • 28444478453 scopus 로고    scopus 로고
    • Conformational changes involved in MscL channel gating measured using FRET spectroscopy
    • Corry B, Rigby P, Liu ZW, Martinac B. Conformational changes involved in MscL channel gating measured using FRET spectroscopy. Biophys J 2005;89:L49-L51.
    • (2005) Biophys J , vol.89
    • Corry, B.1    Rigby, P.2    Liu, Z.W.3    Martinac, B.4
  • 21
    • 22844452064 scopus 로고    scopus 로고
    • The effects of parabens on the mechanosensitive channels of E. coli
    • Nguyen T, Clare B, Guo W, Martinac B. The effects of parabens on the mechanosensitive channels of E. coli. Eur Biophys J 2005;34: 389-395.
    • (2005) Eur Biophys J , vol.34 , pp. 389-395
    • Nguyen, T.1    Clare, B.2    Guo, W.3    Martinac, B.4
  • 22
  • 23
    • 33645962236 scopus 로고    scopus 로고
    • C-terminal charged cluster of MscL. RKKEE, functions as a pH sensor
    • Kloda A, Ghazi A, Martinac B. C-terminal charged cluster of MscL. RKKEE, functions as a pH sensor. Biophys J 2006;90:1992-1998.
    • (2006) Biophys J , vol.90 , pp. 1992-1998
    • Kloda, A.1    Ghazi, A.2    Martinac, B.3
  • 24
    • 33751217731 scopus 로고    scopus 로고
    • Mechanosensitive channel gating transitions resolved by functional changes upon pore modification
    • Bartlett JL, Li Y, Blount P. Mechanosensitive channel gating transitions resolved by functional changes upon pore modification. Biophys J 2006;91:3684-3691.
    • (2006) Biophys J , vol.91 , pp. 3684-3691
    • Bartlett, J.L.1    Li, Y.2    Blount, P.3
  • 25
    • 33846842312 scopus 로고    scopus 로고
    • Dual-color fluorescence-burst analysis to probe protein efflux through the mechanosensitive channel MscL
    • van den Bogaart G, Krasnikov V, Poolman B. Dual-color fluorescence-burst analysis to probe protein efflux through the mechanosensitive channel MscL. Biophys J 2007;92:1233-1240.
    • (2007) Biophys J , vol.92 , pp. 1233-1240
    • van den Bogaart, G.1    Krasnikov, V.2    Poolman, B.3
  • 26
    • 0032545321 scopus 로고    scopus 로고
    • Structure of the MscL homolog from Mycobacterium tuberculosis: A gated mechanosensitive ion channel
    • Chang G, Spencer RH, Lee AT, Barclay MT, Rees DC. Structure of the MscL homolog from Mycobacterium tuberculosis: a gated mechanosensitive ion channel. Science 1998;282:2220-2226.
    • (1998) Science , vol.282 , pp. 2220-2226
    • Chang, G.1    Spencer, R.H.2    Lee, A.T.3    Barclay, M.T.4    Rees, D.C.5
  • 27
    • 34047126893 scopus 로고    scopus 로고
    • Structures of the prokaryotic mechanosensitive channels MscL and MscS
    • Steinbacher S, Bass R, Strop P, Rees DC. Structures of the prokaryotic mechanosensitive channels MscL and MscS. Curr Top Membr 2007;58:1-24.
    • (2007) Curr Top Membr , vol.58 , pp. 1-24
    • Steinbacher, S.1    Bass, R.2    Strop, P.3    Rees, D.C.4
  • 28
    • 0037194760 scopus 로고    scopus 로고
    • Open channel structure of MscL and the gating mechanism of mechanosensitive channels
    • Perozo E, Cortes DM, Sompornpisut P, Kloda A, Martinac B. Open channel structure of MscL and the gating mechanism of mechanosensitive channels. Nature 2002;418:942-948.
    • (2002) Nature , vol.418 , pp. 942-948
    • Perozo, E.1    Cortes, D.M.2    Sompornpisut, P.3    Kloda, A.4    Martinac, B.5
  • 29
    • 0034910316 scopus 로고    scopus 로고
    • Structural models of the MscL gating mechanism
    • Sukharev S, Durell SR, Guy HR. Structural models of the MscL gating mechanism. Biophys J 2001;81:917-936.
    • (2001) Biophys J , vol.81 , pp. 917-936
    • Sukharev, S.1    Durell, S.R.2    Guy, H.R.3
  • 30
    • 0035825634 scopus 로고    scopus 로고
    • The gating mechanism of the large mechanosensitive channel MscL
    • Sukharev S, Betanzos M, Chiang CS, Guy HR. The gating mechanism of the large mechanosensitive channel MscL. Nature 2001;409: 720-724.
    • (2001) Nature , vol.409 , pp. 720-724
    • Sukharev, S.1    Betanzos, M.2    Chiang, C.S.3    Guy, H.R.4
  • 32
    • 2942675244 scopus 로고    scopus 로고
    • Lipid bilayer pressure profiles and mechanosensitive channel gating
    • Gullingsrud J, Schulten K. Lipid bilayer pressure profiles and mechanosensitive channel gating. Biophys J 2004;86:3496-3509.
    • (2004) Biophys J , vol.86 , pp. 3496-3509
    • Gullingsrud, J.1    Schulten, K.2
  • 33
    • 0035039272 scopus 로고    scopus 로고
    • Structural determinants of MscL gating studied by molecular dynamics simulations
    • Gullingsrud J, Kosztin D, Schulten K. Structural determinants of MscL gating studied by molecular dynamics simulations. Biophys J 2001;80:2074-2081.
    • (2001) Biophys J , vol.80 , pp. 2074-2081
    • Gullingsrud, J.1    Kosztin, D.2    Schulten, K.3
  • 34
    • 0141754098 scopus 로고    scopus 로고
    • Gating of MscL studied by steered molecular dynamics
    • Gullingsrud J, Schulten K. Gating of MscL studied by steered molecular dynamics. Biophys J 2003;85:2087-2099.
    • (2003) Biophys J , vol.85 , pp. 2087-2099
    • Gullingsrud, J.1    Schulten, K.2
  • 35
    • 0037382083 scopus 로고    scopus 로고
    • Simulation of MscL gating in a bilayer under stress
    • Colombo G, Marrink SJ, Mark AE. Simulation of MscL gating in a bilayer under stress. Biophys J 2003;84:2331-2337.
    • (2003) Biophys J , vol.84 , pp. 2331-2337
    • Colombo, G.1    Marrink, S.J.2    Mark, A.E.3
  • 36
    • 33748451900 scopus 로고    scopus 로고
    • Molecular dynamics study of MscL interactions with a curved lipid bilayer
    • Meyer GR, Gullingsrud J, Schulten K, Martinac B. Molecular dynamics study of MscL interactions with a curved lipid bilayer. Biophys J 2006;91:1630-1637.
    • (2006) Biophys J , vol.91 , pp. 1630-1637
    • Meyer, G.R.1    Gullingsrud, J.2    Schulten, K.3    Martinac, B.4
  • 37
    • 0041320859 scopus 로고    scopus 로고
    • Investigating lipid composition effects on the mechanosensitive channel of large conductance (MscL) using molecular dynamics simulations
    • Elmore DE, Dougherty DA. Investigating lipid composition effects on the mechanosensitive channel of large conductance (MscL) using molecular dynamics simulations. Biophys J 2003;85:1512-1524.
    • (2003) Biophys J , vol.85 , pp. 1512-1524
    • Elmore, D.E.1    Dougherty, D.A.2
  • 38
    • 0036725152 scopus 로고    scopus 로고
    • Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating
    • Perozo E, Kloda A, Cortes DM, Martinac B. Physical principles underlying the transduction of bilayer deformation forces during mechanosensitive channel gating. Nat Struct Biol 2002;9:696-703.
    • (2002) Nat Struct Biol , vol.9 , pp. 696-703
    • Perozo, E.1    Kloda, A.2    Cortes, D.M.3    Martinac, B.4
  • 39
    • 0034613258 scopus 로고    scopus 로고
    • Correlating a protein structure with function of a bacterial mechanosensitive channel
    • Moe PC, Levin G, Blount P. Correlating a protein structure with function of a bacterial mechanosensitive channel. J Biol Chem 2000;275:31121-31127.
    • (2000) J Biol Chem , vol.275 , pp. 31121-31127
    • Moe, P.C.1    Levin, G.2    Blount, P.3
  • 40
    • 0043238084 scopus 로고    scopus 로고
    • Dynamical properties of the MscL of Escherichia coli: A normal mode analysis
    • Valadie H, Lacapcre JJ, Sanejouand YH, Etchebest C. Dynamical properties of the MscL of Escherichia coli: a normal mode analysis. J Mol Biol 2003;332:657-674.
    • (2003) J Mol Biol , vol.332 , pp. 657-674
    • Valadie, H.1    Lacapcre, J.J.2    Sanejouand, Y.H.3    Etchebest, C.4
  • 41
    • 0035044995 scopus 로고    scopus 로고
    • Conformational change of proteins arising from normal mode calculations
    • Tama F, Sanejouand YH. Conformational change of proteins arising from normal mode calculations. Protein Eng 2001;14:1-6.
    • (2001) Protein Eng , vol.14 , pp. 1-6
    • Tama, F.1    Sanejouand, Y.H.2
  • 42
    • 0036721233 scopus 로고    scopus 로고
    • Normal mode analysis of macromolecular motions in a database framework: Developing mode concentration as a useful classifying statistic
    • Krebs WG, Alexandrov V, Wilson CA, Echols N, Yu H, Gerstein M. Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic. Proteins 2002;48:682-695.
    • (2002) Proteins , vol.48 , pp. 682-695
    • Krebs, W.G.1    Alexandrov, V.2    Wilson, C.A.3    Echols, N.4    Yu, H.5    Gerstein, M.6
  • 43
    • 0242268469 scopus 로고    scopus 로고
    • Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins
    • Miyashita O, Onuchic JN, Wolynes PG. Nonlinear elasticity, proteinquakes, and the energy landscapes of functional transitions in proteins. Proc Natl Acad Sci USA 2003;100:12570-12575.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 12570-12575
    • Miyashita, O.1    Onuchic, J.N.2    Wolynes, P.G.3
  • 44
    • 0034906622 scopus 로고    scopus 로고
    • Analysis of a 10-ns molecular dynamics simulation of mouse acetylcholinesterase
    • Tai K, Shen T, Borjesson U, Philippopoulos M, McCammon JA. Analysis of a 10-ns molecular dynamics simulation of mouse acetylcholinesterase. Biophys J 2001;81:715-724.
    • (2001) Biophys J , vol.81 , pp. 715-724
    • Tai, K.1    Shen, T.2    Borjesson, U.3    Philippopoulos, M.4    McCammon, J.A.5
  • 45
    • 33947431555 scopus 로고    scopus 로고
    • Essential dynamics sampling study of adenylate kinase: Comparison to citrate synthase and implication for the hinge and shear mechanisms of domain motions
    • Snow C, Qi G, Hayward S. Essential dynamics sampling study of adenylate kinase: comparison to citrate synthase and implication for the hinge and shear mechanisms of domain motions. Proteins 2007;67:325-337.
    • (2007) Proteins , vol.67 , pp. 325-337
    • Snow, C.1    Qi, G.2    Hayward, S.3
  • 46
    • 34147097967 scopus 로고    scopus 로고
    • Spiwok V, Lipovova P, Kralova B. Metadynamics in essential coordinates: free energy simulation of conformational changes. J Phys Chem B 2007;111:3073-3076.
    • Spiwok V, Lipovova P, Kralova B. Metadynamics in essential coordinates: free energy simulation of conformational changes. J Phys Chem B 2007;111:3073-3076.
  • 47
    • 0029975929 scopus 로고    scopus 로고
    • Wild-type Escherichia coli cells regulate the membrane lipid composition in a "window" between gel and non-lamellar structures
    • Morein S, Andersson A, Rilfors L, Lindblom G. Wild-type Escherichia coli cells regulate the membrane lipid composition in a "window" between gel and non-lamellar structures. J Biol Chem 1996; 271:6801-6809.
    • (1996) J Biol Chem , vol.271 , pp. 6801-6809
    • Morein, S.1    Andersson, A.2    Rilfors, L.3    Lindblom, G.4
  • 48
    • 0031860932 scopus 로고    scopus 로고
    • A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer
    • Tieleman DP, Berendsen HJ. A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer. Biophys J 1998;74:2786-2801.
    • (1998) Biophys J , vol.74 , pp. 2786-2801
    • Tieleman, D.P.1    Berendsen, H.J.2
  • 49
    • 0030477115 scopus 로고    scopus 로고
    • Towards an understanding of the structural and functional properties of MscL, a mechanosensitive channel in bacteria
    • Blount P, Sukharev SI, Moe PC, Nagle SK, Kung C. Towards an understanding of the structural and functional properties of MscL, a mechanosensitive channel in bacteria. Biol Cell 1996;87:1-8.
    • (1996) Biol Cell , vol.87 , pp. 1-8
    • Blount, P.1    Sukharev, S.I.2    Moe, P.C.3    Nagle, S.K.4    Kung, C.5
  • 50
    • 0035828364 scopus 로고    scopus 로고
    • Molecular dynamics simulation of NMR relaxation rates and slow dynamics in lipid bilayer
    • Lindahl E, Edholm O. Molecular dynamics simulation of NMR relaxation rates and slow dynamics in lipid bilayer. J Chem Phys 2001;115:4938-4950.
    • (2001) J Chem Phys , vol.115 , pp. 4938-4950
    • Lindahl, E.1    Edholm, O.2
  • 51
    • 0029633168 scopus 로고
    • GROMACS: A message-passing parallel molecular dynamics implementation
    • Berendsen HJ, van der Spoel D, van Drunen R. GROMACS: a message-passing parallel molecular dynamics implementation. Comput Phys Commun 1995;91:43-56.
    • (1995) Comput Phys Commun , vol.91 , pp. 43-56
    • Berendsen, H.J.1    van der Spoel, D.2    van Drunen, R.3
  • 52
    • 0030999097 scopus 로고    scopus 로고
    • Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature
    • Berger O, Edholm O, Jahnig F. Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. Biophys J 1997;72: 2002-2013.
    • (1997) Biophys J , vol.72 , pp. 2002-2013
    • Berger, O.1    Edholm, O.2    Jahnig, F.3
  • 56
    • 0029878720 scopus 로고    scopus 로고
    • VMD: Visual molecular dynamics. J Mol Graph
    • Humphrey W, Dalke A, Schulten K. VMD: visual molecular dynamics. J Mol Graph 1996;14:33-38, 27-38.
    • (1996) , vol.14
    • Humphrey, W.1    Dalke, A.2    Schulten, K.3
  • 57
    • 41349089279 scopus 로고    scopus 로고
    • Convergence of sampling in protein simulations
    • Hess B. Convergence of sampling in protein simulations. Phys Rev E Stat Nonlin Soft Matter Phys 2002;65(3, Part 1):031910.
    • (2002) Phys Rev E Stat Nonlin Soft Matter Phys , vol.65 , Issue.3 and PART 1 , pp. 031910
    • Hess, B.1
  • 58
    • 0029560322 scopus 로고
    • Hinge-bending motion in citrate synthase arising from normal mode calculations
    • Marques O, Sanejouand YH. Hinge-bending motion in citrate synthase arising from normal mode calculations. Proteins 1995;23:557-560.
    • (1995) Proteins , vol.23 , pp. 557-560
    • Marques, O.1    Sanejouand, Y.H.2
  • 59
    • 0000216012 scopus 로고
    • Collective protein dynamics and nuclear spin relaxation
    • Bruschweiler R. Collective protein dynamics and nuclear spin relaxation. J Chem Phys 1995;102:3396-3403.
    • (1995) J Chem Phys , vol.102 , pp. 3396-3403
    • Bruschweiler, R.1
  • 60
    • 12844253733 scopus 로고    scopus 로고
    • Deposition and aggregation of aspirin molecules on a phospholipid bilayer pattern
    • Mao G, Chen D, Handa H, Dong W, Kurth DG, Mohwald H. Deposition and aggregation of aspirin molecules on a phospholipid bilayer pattern. Langmuir 2005;21:578-585.
    • (2005) Langmuir , vol.21 , pp. 578-585
    • Mao, G.1    Chen, D.2    Handa, H.3    Dong, W.4    Kurth, D.G.5    Mohwald, H.6
  • 61
    • 0026320893 scopus 로고
    • Phases of phosphatidyl ethanolamine monolayers studied by synchrotron X-ray scattering
    • Helm CA, Tippmann-Krayer P, Mohwald H, Als-Nielsen J, Kjaer K. Phases of phosphatidyl ethanolamine monolayers studied by synchrotron X-ray scattering. Biophys J 1991;60:1457-1476.
    • (1991) Biophys J , vol.60 , pp. 1457-1476
    • Helm, C.A.1    Tippmann-Krayer, P.2    Mohwald, H.3    Als-Nielsen, J.4    Kjaer, K.5
  • 62
    • 0024378918 scopus 로고
    • Hydratation forces between phospholipid bilayers
    • Rand RP, Parsegian VA. Hydratation forces between phospholipid bilayers. Biochem Biophys Acta 1989;988:351-376.
    • (1989) Biochem Biophys Acta , vol.988 , pp. 351-376
    • Rand, R.P.1    Parsegian, V.A.2
  • 63
    • 0034859342 scopus 로고    scopus 로고
    • Molecular dynamics simulations of wild-type and mutant forms of the Mycobacterium tuberculosis MscL channel
    • Elmore DE, Dougherty DA. Molecular dynamics simulations of wild-type and mutant forms of the Mycobacterium tuberculosis MscL channel. Biophys J 2001;81:1345-1359.
    • (2001) Biophys J , vol.81 , pp. 1345-1359
    • Elmore, D.E.1    Dougherty, D.A.2
  • 65
    • 13544256698 scopus 로고    scopus 로고
    • Molecular dynamics study of gating in the mechanosensitive channel of small conductance MscS
    • Sotomayor M, Schulten K. Molecular dynamics study of gating in the mechanosensitive channel of small conductance MscS. Biophys J 2004;87:3050-3065.
    • (2004) Biophys J , vol.87 , pp. 3050-3065
    • Sotomayor, M.1    Schulten, K.2
  • 66
    • 20444366208 scopus 로고    scopus 로고
    • Tilt angle of a trans-membrane helix is determined by hydrophobic mismatch
    • Park SH, Opella SJ. Tilt angle of a trans-membrane helix is determined by hydrophobic mismatch. J Mol Biol 2005;350:310-318.
    • (2005) J Mol Biol , vol.350 , pp. 310-318
    • Park, S.H.1    Opella, S.J.2
  • 67
    • 0000197372 scopus 로고    scopus 로고
    • Large amplitude elastic motions in proteins from a single-parameter, atomic analysis
    • Tirion M. Large amplitude elastic motions in proteins from a single-parameter, atomic analysis. Phys Rev Lett 1996;77:1905-1908.
    • (1996) Phys Rev Lett , vol.77 , pp. 1905-1908
    • Tirion, M.1


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