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Volumn 22, Issue 8, 2008, Pages 970-975

Small RNA guides for de novo DNA methylation in mammalian germ cells

Author keywords

DNA methylation; piRNA; Piwi; Retrotransposon; Spermatogenesis

Indexed keywords

DNA METHYLTRANSFERASE; DNA METHYLTRANSFERASE 3A; DNA METHYLTRANSFERASE 3L; PIWI INTERACTING RNA; RNA; UNCLASSIFIED DRUG;

EID: 42149171774     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.1669408     Document Type: Review
Times cited : (143)

References (44)
  • 3
    • 34248160438 scopus 로고    scopus 로고
    • Developmentally regulated piRNA clusters implicate MILI in transposon control
    • Aravin, A.A., Sachidanandam, R., Girard, A., Fejes-Toth, K., and Hannon, G.J. 2007a. Developmentally regulated piRNA clusters implicate MILI in transposon control. Science 316: 744-747.
    • (2007) Science , vol.316 , pp. 744-747
    • Aravin, A.A.1    Sachidanandam, R.2    Girard, A.3    Fejes-Toth, K.4    Hannon, G.J.5
  • 4
    • 36749037521 scopus 로고    scopus 로고
    • The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
    • Aravin, A.A., Hannon, G.J., and Brennecke, J. 2007b. The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science 318: 761-764.
    • (2007) Science , vol.318 , pp. 761-764
    • Aravin, A.A.1    Hannon, G.J.2    Brennecke, J.3
  • 5
    • 0027280881 scopus 로고
    • Methylation and imprinting: From host defense to gene regulation?
    • Barlow, D.P. 1993. Methylation and imprinting: From host defense to gene regulation? Science 260: 309-310.
    • (1993) Science , vol.260 , pp. 309-310
    • Barlow, D.P.1
  • 6
    • 4544223707 scopus 로고    scopus 로고
    • Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L
    • Bourc'his, D. and Bestor, T.H. 2004. Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L. Nature 431: 96-99.
    • (2004) Nature , vol.431 , pp. 96-99
    • Bourc'his, D.1    Bestor, T.H.2
  • 7
    • 0035930660 scopus 로고    scopus 로고
    • Dnmt3L and the establishment of maternal genomic imprints
    • Bourc'his, D., Xu, G.L., Lin, C.S., Bollman, B., and Bestor, T.H. 2001. Dnmt3L and the establishment of maternal genomic imprints. Science 294: 2536-2539.
    • (2001) Science , vol.294 , pp. 2536-2539
    • Bourc'his, D.1    Xu, G.L.2    Lin, C.S.3    Bollman, B.4    Bestor, T.H.5
  • 8
    • 33947273235 scopus 로고    scopus 로고
    • Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
    • Brennecke, J., Aravin, A.A., Stark, A., Dus, M., Kellis, M., Sachidanandam, R., and Hannon, G.J. 2007. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 128: 1089-1103.
    • (2007) Cell , vol.128 , pp. 1089-1103
    • Brennecke, J.1    Aravin, A.A.2    Stark, A.3    Dus, M.4    Kellis, M.5    Sachidanandam, R.6    Hannon, G.J.7
  • 10
    • 0037168587 scopus 로고    scopus 로고
    • The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a
    • Chedin, F., Lieber, M.R., and Hsieh, C.L. 2002. The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a. Proc. Natl. Acad. Sci. 99: 16916-16921.
    • (2002) Proc. Natl. Acad. Sci , vol.99 , pp. 16916-16921
    • Chedin, F.1    Lieber, M.R.2    Hsieh, C.L.3
  • 13
    • 33751523649 scopus 로고    scopus 로고
    • Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells
    • De La Fuente, R., Baumann, C., Fan, T., Schmidtmann, A., Dobrinski, I., and Muegge, K. 2006. Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells. Nat. Cell Biol. 8: 1448-1454.
    • (2006) Nat. Cell Biol , vol.8 , pp. 1448-1454
    • De La Fuente, R.1    Baumann, C.2    Fan, T.3    Schmidtmann, A.4    Dobrinski, I.5    Muegge, K.6
  • 14
    • 0035890090 scopus 로고    scopus 로고
    • Lsh, a member of the SNF2 family, is required for genome-wide methylation
    • Dennis, K., Fan, T., Geiman, T., Yan, Q., and Muegge, K. 2001. Lsh, a member of the SNF2 family, is required for genome-wide methylation. Genes & Dev. 15: 2940-2944.
    • (2001) Genes & Dev , vol.15 , pp. 2940-2944
    • Dennis, K.1    Fan, T.2    Geiman, T.3    Yan, Q.4    Muegge, K.5
  • 15
    • 35348970326 scopus 로고    scopus 로고
    • Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components
    • El-Shami, M., Pontier, D., Lahmy, S., Braun, L., Picart, C., Vega, D., Hakimi, M.A., Jacobsen, S.E., Cooke, R., and Lagrange, T. 2007. Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components. Genes & Dev. 21: 2539-2544.
    • (2007) Genes & Dev , vol.21 , pp. 2539-2544
    • El-Shami, M.1    Pontier, D.2    Lahmy, S.3    Braun, L.4    Picart, C.5    Vega, D.6    Hakimi, M.A.7    Jacobsen, S.E.8    Cooke, R.9    Lagrange, T.10
  • 16
    • 34548633129 scopus 로고    scopus 로고
    • Epigenetics: Perceptive enzymes
    • Ferguson-Smith, A.C. and Greally, J.M. 2007. Epigenetics: Perceptive enzymes. Nature 449: 148-149.
    • (2007) Nature , vol.449 , pp. 148-149
    • Ferguson-Smith, A.C.1    Greally, J.M.2
  • 17
    • 0034069652 scopus 로고    scopus 로고
    • Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation
    • Gibbons, R.J., McDowell, T.L., Raman, S., O'Rourke, D.M., Garrick, D., Ayyub, H., and Higgs, D.R. 2000. Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation. Nat. Genet. 24: 368-371.
    • (2000) Nat. Genet , vol.24 , pp. 368-371
    • Gibbons, R.J.1    McDowell, T.L.2    Raman, S.3    O'Rourke, D.M.4    Garrick, D.5    Ayyub, H.6    Higgs, D.R.7
  • 18
    • 33745336617 scopus 로고    scopus 로고
    • A germline-specific class of small RNAs binds mammalian Piwi proteins
    • Girard, A., Sachidanandam, R., Hannon, G.J., and Carmell, M.A. 2006. A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature 442: 199-202.
    • (2006) Nature , vol.442 , pp. 199-202
    • Girard, A.1    Sachidanandam, R.2    Hannon, G.J.3    Carmell, M.A.4
  • 19
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • Goll, M.G. and Bestor, T.H. 2005. Eukaryotic cytosine methyltransferases. Annu. Rev. Biochem. 74: 481-514.
    • (2005) Annu. Rev. Biochem , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 20
    • 0035933337 scopus 로고    scopus 로고
    • Enzymatic properties of recombinant Dnmt3a DNA methyltransferase from mouse: The enzyme modifies DNA in a non-processive manner and also methylates non-CpG sites
    • Gowher, H. and Jeltsch, A. 2001. Enzymatic properties of recombinant Dnmt3a DNA methyltransferase from mouse: The enzyme modifies DNA in a non-processive manner and also methylates non-CpG sites. J. Mol. Biol. 309: 1201-1208.
    • (2001) J. Mol. Biol , vol.309 , pp. 1201-1208
    • Gowher, H.1    Jeltsch, A.2
  • 23
    • 34548603504 scopus 로고    scopus 로고
    • Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation
    • Jia, D., Jurkowska, R.Z., Zhang, X., Jeltsch, A., and Cheng, X. 2007. Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation. Nature 449: 248-251.
    • (2007) Nature , vol.449 , pp. 248-251
    • Jia, D.1    Jurkowska, R.Z.2    Zhang, X.3    Jeltsch, A.4    Cheng, X.5
  • 24
    • 3042584653 scopus 로고    scopus 로고
    • Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting
    • Kaneda, M., Okano, M., Hata, K., Sado, T., Tsujimoto, N., Li, E., and Sasaki, H. 2004. Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting. Nature 429: 900-903.
    • (2004) Nature , vol.429 , pp. 900-903
    • Kaneda, M.1    Okano, M.2    Hata, K.3    Sado, T.4    Tsujimoto, N.5    Li, E.6    Sasaki, H.7
  • 25
    • 33748740832 scopus 로고    scopus 로고
    • Reconstitution and mechanism of the stimulation of de novo methylation by human DNMT3L
    • Kareta, M.S., Botello, Z.M., Ennis, J.J., Chou, C., and Chédin, F. 2006. Reconstitution and mechanism of the stimulation of de novo methylation by human DNMT3L. J. Biol. Chem. 281: 25893-25902.
    • (2006) J. Biol. Chem , vol.281 , pp. 25893-25902
    • Kareta, M.S.1    Botello, Z.M.2    Ennis, J.J.3    Chou, C.4    Chédin, F.5
  • 26
    • 34548705374 scopus 로고    scopus 로고
    • Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse
    • Kato, Y., Kaneda, M., Hata, K., Kumaki, K., Hisano, M., Kohara, Y., Okano, M., Li, E., Nozaki, M., and Sasaki, H. 2007. Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse. Hum. Mol. Genet. 16: 2272-2280.
    • (2007) Hum. Mol. Genet , vol.16 , pp. 2272-2280
    • Kato, Y.1    Kaneda, M.2    Hata, K.3    Kumaki, K.4    Hisano, M.5    Kohara, Y.6    Okano, M.7    Li, E.8    Nozaki, M.9    Sasaki, H.10
  • 27
    • 33746636025 scopus 로고    scopus 로고
    • Small RNAs just got bigger: Piwi-interacting RNAs (piRNAs) in mammalian testes
    • Kim, V.N. 2006. Small RNAs just got bigger: Piwi-interacting RNAs (piRNAs) in mammalian testes. Genes & Dev. 20: 1993-1997.
    • (2006) Genes & Dev , vol.20 , pp. 1993-1997
    • Kim, V.N.1
  • 30
    • 34249716352 scopus 로고    scopus 로고
    • Coordinate regulation of DNA methyltransferase expression during oogenesis
    • doi: 10.1186/1471-213X-7- 36
    • Lucifero, D., La Salle, S., Bourc'his, D., Martel, J., Bestor, T.H., and Trasler, J.M. 2007. Coordinate regulation of DNA methyltransferase expression during oogenesis. BMC Dev. Biol. 7: 36. doi: 10.1186/1471-213X-7- 36.
    • (2007) BMC Dev. Biol , vol.7 , pp. 36
    • Lucifero, D.1    La Salle, S.2    Bourc'his, D.3    Martel, J.4    Bestor, T.H.5    Trasler, J.M.6
  • 31
    • 33645757337 scopus 로고    scopus 로고
    • Retroviral elements and their hosts: Insertional mutagenesis in the mouse germ line
    • doi: 10.1371/journal.pgen.0020002
    • Maksakova, I.A., Romanish, M.T., Gagnier, L., Dunn, C.A., van de Lagemaat, L.N., and Mager, D.L. 2006. Retroviral elements and their hosts: Insertional mutagenesis in the mouse germ line. PLoS Genet. 2: e2. doi: 10.1371/journal.pgen.0020002.
    • (2006) PLoS Genet , vol.2
    • Maksakova, I.A.1    Romanish, M.T.2    Gagnier, L.3    Dunn, C.A.4    van de Lagemaat, L.N.5    Mager, D.L.6
  • 32
    • 0141682318 scopus 로고    scopus 로고
    • Primordial germ cells in the mouse
    • McLaren, A. 2003. Primordial germ cells in the mouse. Dev. Biol. 262: 1-15.
    • (2003) Dev. Biol , vol.262 , pp. 1-15
    • McLaren, A.1
  • 33
    • 10644221797 scopus 로고    scopus 로고
    • RITS acts in cis to promote RNA interference- mediated transcriptional and posttranscriptional silencing
    • Noma, K., Sugiyama, T., Cam, H., Verdel, A., Zofall, M., Jia, S., Moazed, D., and Grewal, S.I. 2004. RITS acts in cis to promote RNA interference- mediated transcriptional and posttranscriptional silencing. Nat. Genet. 36: 1174-1180.
    • (2004) Nat. Genet , vol.36 , pp. 1174-1180
    • Noma, K.1    Sugiyama, T.2    Cam, H.3    Verdel, A.4    Zofall, M.5    Jia, S.6    Moazed, D.7    Grewal, S.I.8
  • 36
    • 0023503627 scopus 로고
    • Differences in DNA methylation during oogenesis and spermatogenesis and their persistence during early embryogenesis in the mouse
    • Sanford, J.P., Clark, H.J., Chapman, V.M., and Rossant, J. 1987. Differences in DNA methylation during oogenesis and spermatogenesis and their persistence during early embryogenesis in the mouse. Genes & Dev. 1: 1039-1046.
    • (1987) Genes & Dev , vol.1 , pp. 1039-1046
    • Sanford, J.P.1    Clark, H.J.2    Chapman, V.M.3    Rossant, J.4
  • 37
    • 4444302947 scopus 로고    scopus 로고
    • Crystal structure of Argonaute and its implications for RISC slicer activity
    • Song, J.J., Smith, S.K., Hannon, G.J., and Joshua-Tor, L. 2004. Crystal structure of Argonaute and its implications for RISC slicer activity. Science 305: 1434-1437.
    • (2004) Science , vol.305 , pp. 1434-1437
    • Song, J.J.1    Smith, S.K.2    Hannon, G.J.3    Joshua-Tor, L.4
  • 38
    • 29244433734 scopus 로고    scopus 로고
    • Gamete imprinting: Setting epigenetic patterns for the next generation
    • Trasler, J.M. 2006. Gamete imprinting: Setting epigenetic patterns for the next generation. Reprod. Fertil. Dev. 18: 63-69.
    • (2006) Reprod. Fertil. Dev , vol.18 , pp. 63-69
    • Trasler, J.M.1
  • 39
    • 33746502166 scopus 로고    scopus 로고
    • A distinct small RNA pathway silences selfish genetic elements in the germline
    • Vagin, V.V., Sigova, A., Li, C., Seitz, H., Gvozdev, V., and Zamore, P.D. 2006. A distinct small RNA pathway silences selfish genetic elements in the germline. Science 313: 320-324.
    • (2006) Science , vol.313 , pp. 320-324
    • Vagin, V.V.1    Sigova, A.2    Li, C.3    Seitz, H.4    Gvozdev, V.5    Zamore, P.D.6
  • 41
    • 0030840954 scopus 로고    scopus 로고
    • Cytosine methylation and the ecology of intragenomic parasites
    • Yoder, J.A., Walsh, C.P., and Bestor, T.H. 1997. Cytosine methylation and the ecology of intragenomic parasites. Trends Genet. 13: 335-340.
    • (1997) Trends Genet , vol.13 , pp. 335-340
    • Yoder, J.A.1    Walsh, C.P.2    Bestor, T.H.3
  • 42
    • 33645452014 scopus 로고    scopus 로고
    • Evolution of the vertebrate DNMT3 gene family: A possible link between existence of DNMT3L and genomic imprinting
    • Yokomine, T., Hata, K., Tsudzuki, M., and Sasaki, H. 2006. Evolution of the vertebrate DNMT3 gene family: A possible link between existence of DNMT3L and genomic imprinting. Cytogenet. Genome Res. 113: 75-80.
    • (2006) Cytogenet. Genome Res , vol.113 , pp. 75-80
    • Yokomine, T.1    Hata, K.2    Tsudzuki, M.3    Sasaki, H.4
  • 44
    • 34249317118 scopus 로고    scopus 로고
    • RNAi-mediated heterochromatin assembly in fission yeast
    • Zofall, M. and Grewal, S.I. 2006. RNAi-mediated heterochromatin assembly in fission yeast. Cold Spring Harb. Symp. Quant. Biol. 71: 487-496.
    • (2006) Cold Spring Harb. Symp. Quant. Biol , vol.71 , pp. 487-496
    • Zofall, M.1    Grewal, S.I.2


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