메뉴 건너뛰기




Volumn 10, Issue 3, 2008, Pages 310-318

Expression profiling and validation of potential reference genes during Paralichthys olivaceus embryogenesis

Author keywords

Expression profiles; Paralichthys olivaceus; Quantitative real time PCR; Reference genes

Indexed keywords

EMBRYOGENESIS; EMBRYONIC DEVELOPMENT; PARALICHTHYS OLIVACEUS;

EID: 42149171231     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-007-9064-7     Document Type: Article
Times cited : (71)

References (31)
  • 1
    • 18044374087 scopus 로고    scopus 로고
    • Housekeeping gene expression during fetal brain development in the rat-validation by semi-quantitative RT-PCR
    • Al-Bader MD, Al-Sarraf HA (2005) Housekeeping gene expression during fetal brain development in the rat-validation by semi-quantitative RT-PCR. Brain Res Dev Brain Res 156:38-45
    • (2005) Brain Res Dev Brain Res , vol.156 , pp. 38-45
    • Al-Bader, M.D.1    Al-Sarraf, H.A.2
  • 2
    • 32944470943 scopus 로고    scopus 로고
    • Quantitative analysis of messenger RNA abundance for ribosomal protein L-15, cyclophilin-A, phosphoglycerokinase, beta-glucuronidase, glyceraldehyde 3-phosphate dehydrogenase, beta-actin, and histone H2A during bovine oocyte maturation and early embryogenesis in vitro
    • Bettegowda A, Patel OV, Ireland JJ, Smith GW (2006) Quantitative analysis of messenger RNA abundance for ribosomal protein L-15, cyclophilin-A, phosphoglycerokinase, beta-glucuronidase, glyceraldehyde 3-phosphate dehydrogenase, beta-actin, and histone H2A during bovine oocyte maturation and early embryogenesis in vitro. Mol Reprod Dev 73:267-278
    • (2006) Mol Reprod Dev , vol.73 , pp. 267-278
    • Bettegowda, A.1    Patel, O.V.2    Ireland, J.J.3    Smith, G.W.4
  • 3
    • 23944492862 scopus 로고    scopus 로고
    • Inductive expression and characterization analysis of Paralichthys olivaceus pigment epithelium-derived factor in a virally infected cell line
    • Chen YD, Zhang YB, Zhu R, Zhang FT, Jiang J, Shi Y, Zhang QY, Chen SL, Gui JF (2005) Inductive expression and characterization analysis of Paralichthys olivaceus pigment epithelium-derived factor in a virally infected cell line. Biochem Biophys Res Commun 335:799-809
    • (2005) Biochem Biophys Res Commun , vol.335 , pp. 799-809
    • Chen, Y.D.1    Zhang, Y.B.2    Zhu, R.3    Zhang, F.T.4    Jiang, J.5    Shi, Y.6    Zhang, Q.Y.7    Chen, S.L.8    Gui, J.F.9
  • 6
    • 0033778696 scopus 로고    scopus 로고
    • Modeling the interplay of generic and genetic mechanisms in cleavage, blastulation, and gastrulation
    • Drasdo D, Forgacs G (2000) Modeling the interplay of generic and genetic mechanisms in cleavage, blastulation, and gastrulation. Dev Dyn 219:182-191
    • (2000) Dev Dyn , vol.219 , pp. 182-191
    • Drasdo, D.1    Forgacs, G.2
  • 7
    • 0036729454 scopus 로고    scopus 로고
    • Beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels
    • Glare EM, Divjak M, Bailey MJ, Walters EH (2002) beta-Actin and GAPDH housekeeping gene expression in asthmatic airways is variable and not suitable for normalising mRNA levels. Thorax 57:765-770
    • (2002) Thorax , vol.57 , pp. 765-770
    • Glare, E.M.1    Divjak, M.2    Bailey, M.J.3    Walters, E.H.4
  • 8
    • 0035423813 scopus 로고    scopus 로고
    • Ribosomal 18S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations
    • Goidin D, Mamessier A, Staquet MJ, Schmitt D, Berthier-Vergnes O (2001) Ribosomal 18S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations. Anal Biochem 295:17-21
    • (2001) Anal Biochem , vol.295 , pp. 17-21
    • Goidin, D.1    Mamessier, A.2    Staquet, M.J.3    Schmitt, D.4    Berthier-Vergnes, O.5
  • 10
    • 21344471138 scopus 로고    scopus 로고
    • Real-time RT-PCR normalisation; Strategies and considerations
    • Huggett J, Dheda K, Bustin S, Zumla A (2005) Real-time RT-PCR normalisation; strategies and considerations. Genes Immun 6:279-284
    • (2005) Genes Immun , vol.6 , pp. 279-284
    • Huggett, J.1    Dheda, K.2    Bustin, S.3    Zumla, A.4
  • 11
    • 30344451080 scopus 로고    scopus 로고
    • Expression profiling and validation of reference gene candidates in immune relevant tissues and cells from Atlantic salmon (Salmo salar L)
    • Ingerslev HC, Pettersen EF, Jakobsen RA, Petersen CB, Wergeland HI (2006) Expression profiling and validation of reference gene candidates in immune relevant tissues and cells from Atlantic salmon (Salmo salar L). Mol Immunol 43:1194-1201
    • (2006) Mol Immunol , vol.43 , pp. 1194-1201
    • Ingerslev, H.C.1    Pettersen, E.F.2    Jakobsen, R.A.3    Petersen, C.B.4    Wergeland, H.I.5
  • 12
    • 20044391439 scopus 로고    scopus 로고
    • Optimization of real time RT-PCR methods for the analysis of gene expression in mouse eggs and preimplantation embryos
    • Jeong YJ, Choi HW, Shin HS, Cui XS, Kim NH, Gerton GL, Jun JH (2005) Optimization of real time RT-PCR methods for the analysis of gene expression in mouse eggs and preimplantation embryos. Mol Reprod Dev 71:284-289
    • (2005) Mol Reprod Dev , vol.71 , pp. 284-289
    • Jeong, Y.J.1    Choi, H.W.2    Shin, H.S.3    Cui, X.S.4    Kim, N.H.5    Gerton, G.L.6    Jun, J.H.7
  • 13
    • 33747132412 scopus 로고    scopus 로고
    • Validation of reference genes for real-time polymerase chain reaction studies in Atlantic salmon
    • Jorgensen SM, Kleveland EJ, Grimholt U, Gjoen T (2006) Validation of reference genes for real-time polymerase chain reaction studies in Atlantic salmon. Mar Biotechnol 8:398-408
    • (2006) Mar Biotechnol , vol.8 , pp. 398-408
    • Jorgensen, S.M.1    Kleveland, E.J.2    Grimholt, U.3    Gjoen, T.4
  • 14
    • 0027386243 scopus 로고
    • The zebrafish midblastula transition
    • Kane DA, Kimmel CB (1993) The zebrafish midblastula transition. Development 119:447-456
    • (1993) Development , vol.119 , pp. 447-456
    • Kane, D.A.1    Kimmel, C.B.2
  • 15
    • 0024513250 scopus 로고
    • The mRNA encoding elongation factor 1-alpha (EF-1 alpha) is a major transcript at the midblastula transition in Xenopus
    • Krieg PA, Varnum SM, Wormington WM, Melton DA (1989) The mRNA encoding elongation factor 1-alpha (EF-1 alpha) is a major transcript at the midblastula transition in Xenopus. Dev Biol 133:93-100
    • (1989) Dev Biol , vol.133 , pp. 93-100
    • Krieg, P.A.1    Varnum, S.M.2    Wormington, W.M.3    Melton, D.A.4
  • 17
    • 28344455318 scopus 로고    scopus 로고
    • Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon
    • Olsvik PA, Lie KK, Jordal AE, Nilsen TO, Hordvik I (2005) Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon. BMC Mol Biol 6:21
    • (2005) BMC Mol Biol , vol.6 , pp. 21
    • Olsvik, P.A.1    Lie, K.K.2    Jordal, A.E.3    Nilsen, T.O.4    Hordvik, I.5
  • 18
    • 0242642856 scopus 로고    scopus 로고
    • Maternal factors in zebrafish development
    • Pelegri F (2003) Maternal factors in zebrafish development. Dev Dyn 228:535-554
    • (2003) Dev Dyn , vol.228 , pp. 535-554
    • Pelegri, F.1
  • 20
    • 0036265158 scopus 로고    scopus 로고
    • Quantitative assessment of gene expression in highly purified hematopoietic cells using real-time reverse transcriptase polymerase chain reaction
    • Raaijmakers MH, van Emst L, de Witte T, Mensink E, Raymakers RA (2002) Quantitative assessment of gene expression in highly purified hematopoietic cells using real-time reverse transcriptase polymerase chain reaction. Exp Hematol 30:481-487
    • (2002) Exp Hematol , vol.30 , pp. 481-487
    • Raaijmakers, M.H.1    Van Emst, L.2    De Witte, T.3    Mensink, E.4    Raymakers, R.A.5
  • 22
    • 0034694128 scopus 로고    scopus 로고
    • Effect of experimental treatment on housekeeping gene expression: Validation by real-time, quantitative RT-PCR
    • Schmittgen TD, Zakrajsek BA (2000) Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 46:69-81
    • (2000) J Biochem Biophys Methods , vol.46 , pp. 69-81
    • Schmittgen, T.D.1    Zakrajsek, B.A.2
  • 23
    • 33644891305 scopus 로고    scopus 로고
    • Developmental expression profiles of Xenopus laevis reference genes
    • Sindelka R, Ferjentsik Z, Jonak J (2006) Developmental expression profiles of Xenopus laevis reference genes. Dev Dyn 235:754-758
    • (2006) Dev Dyn , vol.235 , pp. 754-758
    • Sindelka, R.1    Ferjentsik, Z.2    Jonak, J.3
  • 24
    • 0035161457 scopus 로고    scopus 로고
    • Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors
    • Solanas M, Moral R, Escrich E (2001) Unsuitability of using ribosomal RNA as loading control for Northern blot analyses related to the imbalance between messenger and ribosomal RNA content in rat mammary tumors. Anal Biochem 288:99-102
    • (2001) Anal Biochem , vol.288 , pp. 99-102
    • Solanas, M.1    Moral, R.2    Escrich, E.3
  • 26
    • 34548255226 scopus 로고    scopus 로고
    • Molecular cloning and characterization of Toll-like receptor 9 in Japanese flounder, Paralichthys olivaceus
    • Takano T, Kondo H, Hirono I, Endo M, Saito-Taki T, Aoki T (2007) Molecular cloning and characterization of Toll-like receptor 9 in Japanese flounder, Paralichthys olivaceus. Mol Immunol 44:1845-1853
    • (2007) Mol Immunol , vol.44 , pp. 1845-1853
    • Takano, T.1    Kondo, H.2    Hirono, I.3    Endo, M.4    Saito-Taki, T.5    Aoki, T.6
  • 27
    • 34249023638 scopus 로고    scopus 로고
    • Validation of zebrafish (Danio rerio) reference genes for quantitative real-time RT-PCR normalization
    • Tang R, Dodd A, Lai D, McNabb WC, Love DR (2007) Validation of zebrafish (Danio rerio) reference genes for quantitative real-time RT-PCR normalization. Acta Biochim Biophys Sin (Shanghai) 39:384-390
    • (2007) Acta Biochim Biophys Sin (Shanghai) , vol.39 , pp. 384-390
    • Tang, R.1    Dodd, A.2    Lai, D.3    McNabb, W.C.4    Love, D.R.5
  • 29
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • RESEARCH0034
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3:RESEARCH0034
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 30
    • 33646482764 scopus 로고    scopus 로고
    • Characterization of muscle-regulatory gene, MyoD, from flounder (Paralichthys olivaceus) and analysis of its expression patterns during embryogenesis
    • Zhang Y, Tan X, Zhang PJ, Xu Y (2006) Characterization of muscle-regulatory gene, MyoD, from flounder (Paralichthys olivaceus) and analysis of its expression patterns during embryogenesis. Mar Biotechnol 8:139-148
    • (2006) Mar Biotechnol , vol.8 , pp. 139-148
    • Zhang, Y.1    Tan, X.2    Zhang, P.J.3    Xu, Y.4
  • 31
    • 33846556363 scopus 로고    scopus 로고
    • Development and validation of endogenous reference genes for expression profiling of medaka (Oryzias latipes) exposed to endocrine disrupting chemicals by quantitative real-time RT-PCR
    • Zhang Z, Hu J (2007) Development and validation of endogenous reference genes for expression profiling of medaka (Oryzias latipes) exposed to endocrine disrupting chemicals by quantitative real-time RT-PCR. Toxicol Sci 95:356-368
    • (2007) Toxicol Sci , vol.95 , pp. 356-368
    • Zhang, Z.1    Hu, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.