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Volumn 5, Issue , 2005, Pages

Selection of reference genes for quantitative real-time PCR in bovine preimplantation embryos

Author keywords

[No Author keywords available]

Indexed keywords

BETA ACTIN; GLYCERALDEHYDE 3 PHOSPHATE; RIBOSOME RNA; GENETIC MARKER;

EID: 29144510503     PISSN: 1471213X     EISSN: 1471213X     Source Type: Journal    
DOI: 10.1186/1471-213X-5-27     Document Type: Article
Times cited : (267)

References (40)
  • 1
    • 0033987647 scopus 로고    scopus 로고
    • Alterations of expression of developmentally important genes in preimplantation bovine embryos by in vitro culture conditions: Implications for subsequent development
    • Niemann H, Wrenzycki C: Alterations of expression of developmentally important genes in preimplantation bovine embryos by in vitro culture conditions: implications for subsequent development. Theriogenology 2000, 53:21-34.
    • (2000) Theriogenology , vol.53 , pp. 21-34
    • Niemann, H.1    Wrenzycki, C.2
  • 2
    • 0032704138 scopus 로고    scopus 로고
    • Analysis of gene expression in single oocytes and embryos by real-time rapid cycle fluorescence monitored RT-PCR
    • Steuerwald N, Cohen J, Herrera RJ, Brenner CA: Analysis of gene expression in single oocytes and embryos by real-time rapid cycle fluorescence monitored RT-PCR. Mol Hum Reprod 1999, 11:1034-1039.
    • (1999) Mol Hum Reprod , vol.11 , pp. 1034-1039
    • Steuerwald, N.1    Cohen, J.2    Herrera, R.J.3    Brenner, C.A.4
  • 3
    • 12144255953 scopus 로고    scopus 로고
    • Potential and limitations of bovine-specific arrays for the analysis of mRNA levels in early development: Premilimary analysis using a bovine embryonic array
    • Sirard MA, Dufort I, Vallée M, Massicotte L, Gravel C, Reghenas H, Watson AJ, King WA, Robert C: Potential and limitations of bovine-specific arrays for the analysis of mRNA levels in early development: premilimary analysis using a bovine embryonic array. Reprod Fertil Dev 2005, 17:47-57.
    • (2005) Reprod Fertil Dev , vol.17 , pp. 47-57
    • Sirard, M.A.1    Dufort, I.2    Vallée, M.3    Massicotte, L.4    Gravel, C.5    Reghenas, H.6    Watson, A.J.7    King, W.A.8    Robert, C.9
  • 4
    • 0028241440 scopus 로고
    • Expression of plasminogen activator genes and enzymatic activities in rat preimplantation embryos
    • Zhang X, Kidder GM, Zhang C, Khamsi F, Armstrong DT: Expression of plasminogen activator genes and enzymatic activities in rat preimplantation embryos. J Reprod Fertil 1994, 101:235-240.
    • (1994) J Reprod Fertil , vol.101 , pp. 235-240
    • Zhang, X.1    Kidder, G.M.2    Zhang, C.3    Khamsi, F.4    Armstrong, D.T.5
  • 6
    • 0031748157 scopus 로고    scopus 로고
    • Expression of RNA from developmentally important genes in preimplantation bovine embryos produced in TCM supplemented with BSA
    • Wrenzycki C, Hermann D, Carnwath JW, Niemann H: Expression of RNA from developmentally important genes in preimplantation bovine embryos produced in TCM supplemented with BSA. J Reprod Fertil 1998, 112:387-398.
    • (1998) J Reprod Fertil , vol.112 , pp. 387-398
    • Wrenzycki, C.1    Hermann, D.2    Carnwath, J.W.3    Niemann, H.4
  • 7
    • 0037499536 scopus 로고    scopus 로고
    • Timing of blastocyst expansion affects spatial messenger RNA expression patterns of genes in bovine blastocysts produced in vitro
    • Wrenzycki C, Herrmann D, Niemann H: Timing of blastocyst expansion affects spatial messenger RNA expression patterns of genes in bovine blastocysts produced in vitro. Biol Reprod 2003, 68:2073-2080.
    • (2003) Biol Reprod , vol.68 , pp. 2073-2080
    • Wrenzycki, C.1    Herrmann, D.2    Niemann, H.3
  • 8
    • 20044391439 scopus 로고    scopus 로고
    • Optimization of real-time RT-PCR methods for the analysis of gene expression in mouse eggs and preimplantation embryos
    • Jeong YJ, Choi HW, Shin HS, Cui XS, Kim NH, Gerton GL, Jun JH: Optimization of real-time RT-PCR methods for the analysis of gene expression in mouse eggs and preimplantation embryos. Mol Reprod Dev 2005, 71:284-289.
    • (2005) Mol Reprod Dev , vol.71 , pp. 284-289
    • Jeong, Y.J.1    Choi, H.W.2    Shin, H.S.3    Cui, X.S.4    Kim, N.H.5    Gerton, G.L.6    Jun, J.H.7
  • 9
    • 0033775615 scopus 로고    scopus 로고
    • Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays
    • Bustin SA: Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. J Mol Endocrinol 2000, 25:169-193.
    • (2000) J Mol Endocrinol , vol.25 , pp. 169-193
    • Bustin, S.A.1
  • 10
    • 0036668567 scopus 로고    scopus 로고
    • Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): Trends and problems
    • Bustin SA: Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. J Mol Endocrinol 2002, 29:23-39.
    • (2002) J Mol Endocrinol , vol.29 , pp. 23-39
    • Bustin, S.A.1
  • 12
    • 0036534582 scopus 로고    scopus 로고
    • Elimination of primer-dimer artifacts and genomic coamplification using a two-step SYBR Green I Real-Time RT-PCR
    • Vandesompele J, De Paepe A, Speleman F: Elimination of primer-dimer artifacts and genomic coamplification using a two-step SYBR Green I Real-Time RT-PCR. Anal Biochem 2002, 303:95-98.
    • (2002) Anal Biochem , vol.303 , pp. 95-98
    • Vandesompele, J.1    De Paepe, A.2    Speleman, F.3
  • 13
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • Andersen CL, Jensen JL, Ørntoft TF: Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 2004, 64:5245-5250.
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Ørntoft, T.F.3
  • 14
    • 22844433444 scopus 로고    scopus 로고
    • Real-time reverse transcription-PCR quantification of substance P receptor (NK-1R) mRNA
    • Lai JP, Douglas SD, Wang YJ, Ho WZ: Real-time reverse transcription-PCR quantification of substance P receptor (NK-1R) mRNA. Clin Diagn Lab Immunol 2005, 12:537-541.
    • (2005) Clin Diagn Lab Immunol , vol.12 , pp. 537-541
    • Lai, J.P.1    Douglas, S.D.2    Wang, Y.J.3    Ho, W.Z.4
  • 15
    • 14044265394 scopus 로고    scopus 로고
    • Pitfalls of quantitative real-time reverse-transcription Polymerase Chain Reaction
    • Bustin SA, Nolan T: Pitfalls of quantitative real-time reverse-transcription Polymerase Chain Reaction. J Biomol Tech 2004, 15:155-166.
    • (2004) J Biomol Tech , vol.15 , pp. 155-166
    • Bustin, S.A.1    Nolan, T.2
  • 16
    • 9744244248 scopus 로고    scopus 로고
    • Isolation of genes associated with developmentally competent bovine oocytes and quantitation of their expression levels during development
    • Donnison M, Pfeffer PL: Isolation of genes associated with developmentally competent bovine oocytes and quantitation of their expression levels during development. Biol Reprod 2004, 71:1813-1321.
    • (2004) Biol Reprod , vol.71 , pp. 1813-11321
    • Donnison, M.1    Pfeffer, P.L.2
  • 19
    • 0036839114 scopus 로고    scopus 로고
    • Quantification of housekeeping transcript levels during the development of bovine preimplantation embryos
    • Robert C, McGraw S, Massicotte L, Pravetoni M, Gandolfi F, Sirard MA: Quantification of housekeeping transcript levels during the development of bovine preimplantation embryos. Biol Reprod 2002, 67:1465-1472.
    • (2002) Biol Reprod , vol.67 , pp. 1465-1472
    • Robert, C.1    McGraw, S.2    Massicotte, L.3    Pravetoni, M.4    Gandolfi, F.5    Sirard, M.A.6
  • 20
    • 26444617222 scopus 로고    scopus 로고
    • Selection of reference genes for gene expression studies in human neutrophils by real-time PCR
    • Zhang X, Ding L, Sandford AJ: Selection of reference genes for gene expression studies in human neutrophils by real-time PCR. BMC Mol Biol 2005, 6:4.
    • (2005) BMC Mol Biol , vol.6 , pp. 4
    • Zhang, X.1    Ding, L.2    Sandford, A.J.3
  • 21
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of Real-Time quantitative RT-PCR by geometric averaging of multiple internal control genes
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F: Accurate normalization of Real-Time quantitative RT-PCR by geometric averaging of multiple internal control genes. Genome Biol 2002, 3:34 [http://medgen.ugent.be/∼jvdesomp/genorm/].
    • (2002) Genome Biol , vol.3 , pp. 34
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 22
    • 0348161301 scopus 로고    scopus 로고
    • Assessment of mammalian embryo quality: What can we learn from embryo morphology?
    • Van Soom A, Mateusen B, Leroy J, De Kruif A: Assessment of mammalian embryo quality: what can we learn from embryo morphology? Reprod Biomed Online 2003, 7:664-670.
    • (2003) Reprod Biomed Online , vol.7 , pp. 664-670
    • Van Soom, A.1    Mateusen, B.2    Leroy, J.3    De Kruif, A.4
  • 23
    • 0037134017 scopus 로고    scopus 로고
    • Tech Sight. A technique whose time has come
    • Walker NJ: Tech Sight. A technique whose time has come. Science 2002, 296:557-559.
    • (2002) Science , vol.296 , pp. 557-559
    • Walker, N.J.1
  • 25
    • 12144282758 scopus 로고    scopus 로고
    • Messenger RNA expression patterns in bovine embryos derived from in vitro procedures and their implications for development
    • Wrenzycki C, Herrmann D, Lucas-Hahn A, Korsawe K, Lemme E, Niemann H: Messenger RNA expression patterns in bovine embryos derived from in vitro procedures and their implications for development. Reprod Fertil Dev 2005, 17:23-35.
    • (2005) Reprod Fertil Dev , vol.17 , pp. 23-35
    • Wrenzycki, C.1    Herrmann, D.2    Lucas-Hahn, A.3    Korsawe, K.4    Lemme, E.5    Niemann, H.6
  • 26
    • 1842829051 scopus 로고    scopus 로고
    • Real-time RT-PCR: Considerations for efficient and sensitive assay design
    • Peters IR, Helps CR, Hall EJ, Day MJ: Real-time RT-PCR: considerations for efficient and sensitive assay design. J Immunol Methods 2004, 286:203-217.
    • (2004) J Immunol Methods , vol.286 , pp. 203-217
    • Peters, I.R.1    Helps, C.R.2    Hall, E.J.3    Day, M.J.4
  • 27
    • 0347989469 scopus 로고    scopus 로고
    • Analysis of differential maternal mRNA expression in developmentally competent and incompetent bovine two-cell embryos
    • Fair T, Murphy M, Rizos D, Moss C, Martin F, Boland MP, Lonergan P: Analysis of differential maternal mRNA expression in developmentally competent and incompetent bovine two-cell embryos. Mol Reprod Dev 2004, 67:136-144.
    • (2004) Mol Reprod Dev , vol.67 , pp. 136-144
    • Fair, T.1    Murphy, M.2    Rizos, D.3    Moss, C.4    Martin, F.5    Boland, M.P.6    Lonergan, P.7
  • 28
    • 9744244248 scopus 로고    scopus 로고
    • Isolation of genes associated with developmentally competent bovine oocytes and quantitation of their levels during development
    • Donnison M, Pfeffer PL: Isolation of genes associated with developmentally competent bovine oocytes and quantitation of their levels during development. Biol Reprod 2004, 71:1813-1821.
    • (2004) Biol Reprod , vol.71 , pp. 1813-1821
    • Donnison, M.1    Pfeffer, P.L.2
  • 29
    • 15844423514 scopus 로고    scopus 로고
    • Ex vivo embryo development and effects on gene expression and imprinting
    • Gardner DK, Lane M: Ex vivo embryo development and effects on gene expression and imprinting. Reprod Fertil Dev 2005, 17:361-370.
    • (2005) Reprod Fertil Dev , vol.17 , pp. 361-370
    • Gardner, D.K.1    Lane, M.2
  • 31
    • 2942514471 scopus 로고    scopus 로고
    • A global view of gene expression in the preimplantation mouse embryo: Morula versus blastocyst
    • Tanaka TS, Ko MS: A global view of gene expression in the preimplantation mouse embryo: morula versus blastocyst. Eur J Obstet Gynecol Reprod Biol 2004, 115:85-91.
    • (2004) Eur J Obstet Gynecol Reprod Biol , vol.115 , pp. 85-91
    • Tanaka, T.S.1    Ko, M.S.2
  • 32
    • 0030911139 scopus 로고    scopus 로고
    • Changes in the relative abundance of various housekeeping gene transcripts in in vitro-produced early bovine embryos
    • Bilodeau-Goeseels S, Schultz GA: Changes in the relative abundance of various housekeeping gene transcripts in in vitro-produced early bovine embryos. Mol Reprod Dev 1997, 47:413-420.
    • (1997) Mol Reprod Dev , vol.47 , pp. 413-420
    • Bilodeau-Goeseels, S.1    Schultz, G.A.2
  • 33
    • 0021922976 scopus 로고
    • Actin mRNA content in normal and delayed implanting mouse embryos
    • Giebelhaus DH, Weitlauf HM, Schultz GA: Actin mRNA content in normal and delayed implanting mouse embryos. Dev Biol 1985, 107:407-413.
    • (1985) Dev Biol , vol.107 , pp. 407-413
    • Giebelhaus, D.H.1    Weitlauf, H.M.2    Schultz, G.A.3
  • 34
    • 0030933236 scopus 로고    scopus 로고
    • Changes in ribosomal nucleic acid content within in vitro-produced bovine embryos
    • Bilodeau-Goeseels S, Schultz GA: Changes in ribosomal nucleic acid content within in vitro-produced bovine embryos. Biol Reprod 1997, 56:1323-1329.
    • (1997) Biol Reprod , vol.56 , pp. 1323-1329
    • Bilodeau-Goeseels, S.1    Schultz, G.A.2
  • 35
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP: Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper - Excel-based tool using pair-wise correlations. Biotechnol Lett 2004, 26:509-515.
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 36
    • 15544374615 scopus 로고    scopus 로고
    • Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, Yellow fever virus, Human Herpesvirus-6 and Cytomegalovirus infections
    • Radonic A, Thulke S, Bae HG, Müller MA, Siegert W, Nitsche A: Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, Yellow fever virus, Human Herpesvirus-6 and Cytomegalovirus infections. Virol J 2005, 2:7.
    • (2005) Virol J , vol.2 , pp. 7
    • Radonic, A.1    Thulke, S.2    Bae, H.G.3    Müller, M.A.4    Siegert, W.5    Nitsche, A.6
  • 38
    • 2642549853 scopus 로고    scopus 로고
    • Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition
    • Vigneault C, McGraw S, Massicotte L, Sirard MA: Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition. Biol Reprod 2004, 70:1701-1709.
    • (2004) Biol Reprod , vol.70 , pp. 1701-1709
    • Vigneault, C.1    McGraw, S.2    Massicotte, L.3    Sirard, M.A.4
  • 39
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H: Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 2000, 132:365-86 [http://frodo.wi.mit. edu/cgi-bin/primer3/primer3_www.cgi].
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 40
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M: Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 2003, 31:3406-3415 [http://www.bioinfo.rpi.edu/ applications/mfold/old/dna/form1.cgi].
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


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