A 7 μm mini-beam improves diffraction data from small or imperfect crystals of macromolecules

Acta Crystallographica Section D: Biological Crystallography

Volumn 64, Issue 4, 2008, Pages 425-435

  Sanishvili, Ruslan ^a   Nagarajan, Venugopalan ^a   Yoder, Derek ^a   Becker, Michael ^a   Xu, Shenglan ^a   Corcoran, Stephen ^a   Akey, David L ^b   Smith, Janet L ^b   Fischetti, Robert F ^a  

^a ARGONNE NATIONAL LABORATORY   (United States)

^b UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

Author keywords

Beam divergence; Crystal segment; High mosaicity; Inhomogeneous crystal; Microbeam; Microcrystals; Microdiffraction; Mini beam; Signal to noise; Streaky spots

Indexed keywords

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; CRYSTALLIZATION; INFORMATION PROCESSING; INSTRUMENTATION; MACROMOLECULE; STATISTICAL ANALYSIS; X RAY DIFFRACTION;

CRYSTALLIZATION; DATA COLLECTION; DATA INTERPRETATION, STATISTICAL; MACROMOLECULAR SUBSTANCES; MODELS, MOLECULAR; X-RAY DIFFRACTION;

EID: 41949138317     PISSN: 09074449     EISSN: 13990047     Source Type: Journal    
DOI: 10.1107/S0907444908001741     Document Type: Article

References (39)

1. Akey, D. L., Kittendorf, J. D., Giraldes, J. W., Fecik, R. A., Sherman, D. H. & Smith, J. L. (2006). Nature Chem. Biol. 2, 537-542.
2. Bilderback, D. H., Hoffman, S. A. & Thiel, D. J. (1994). Science, 263, 201-203.
3. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
4. Burmeister, W. P. (2000). Acta Cryst. D56, 326-341.
5. Cherezov, V. & Caffrey, M. (2006). J. Appl. Cryst. 39, 604-606.
6. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
7. Coulibaly, F., Chiu, E., Ikeda, K., Gutmann, S., Haebel, P. W., Schulze-Briese, C., Mori, H. & Metcalf, P. (2007). Nature (London), 446, 97-101.
8. Cusack, S., Belrhali, H., Bram, A., Burghammer, M., Perrakis, A. & Riekel, C. (1998). Nature Struct. Biol. 5, Suppl., 634-637.
9. Dimasi, N., Flot, D., Dupeux, F. & Márquez, J. A. (2007). Acta Cryst. F63, 204-208.
10. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
11. Engstrom, P., Fiedler, S. & Riekel, C. (1997). Rev. Sci. Instrum. 66, 1348-1350.
12. Fischetti, R. F., Yoder, D. W., Xu, S., Stepanov, S., Makarov, O., Benn, R., Corcoran, S., Diete, W., Schwoerer-Boehing, M., Signorato, R., Schroeder, L., Berman, L., Viccaro, P. J. & Smith. J. L. (2007). Synchrotron Radiation Instrumentation: Ninth International Conference on Synchrotron Radiation Instrumentation, edited by J.-Y. Choi & S. Rah, pp. 754-757. New York: American Institute of Physics.
13. Fotinou, C., Emsley, P., Black, I., Ando, H., Ishida, H., Kiso, M., Sinha, K. A., Fairweather, N. F. & Isaacs, N. W. (2001). J. Biol. Chem. 276, 32274-32281.
14. Glaeser, R., Facciotti, M., Walian, P., Rouhani, S., Holton, J., MacDowell, A., Celestre, R., Cambie, D. & Padmore, H. (2000). Biophys. J. 78, 3178-3185.
15. Huang, R. & Bilderback, D. H. (2006). J. Synchrotron Rad. 13, 74-84.
16. Jark, W., Pérennès, F. & Matteucci, M. (2006). J. Synchrotron Rad. 13, 239-252.
17. Jones, T. A., Zou, J.-Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
18. Lagomarsino, S., Bukreeva, I., Mocella, V., Surpi, A., Bigault, T. & Cedola, A. (2006). J. Synchrotron Rad. 13, 85-87.
19. Landau, E. M. & Rosenbusch, J. P. (1996). Proc. Natl Acad. Sci. USA, 93, 14532-14535.
20. Li, J., Edwards, P. C., Burghammer, M., Villa, C. & Schertler, G. F. (2004). J. Mol. Biol. 343, 1409-1438.
21. McPhillips, T. M., McPhillips, S. E., Chiu, H.-J., Cohen, A. E., Deacon, A. M., Ellis, P. J., Garman, E., Gonzalez, A., Sauter, N. K., Phizackerley, R. P., Soltis, S. M. & Kuhn, P. (2002). J. Synchrotron Rad. 9, 401-406.
22. Misquitta, L. V., Misquitta, Y., Cherezov, V., Slattery, O., Mohan, J. M., Hart, D., Zhalnina, M., Cramer, W. A. & Caffrey, M. (2004). Structure, 12, 2113-2124.
23. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
24. Nelson, R., Sawaya, M. R., Balbirnie, M., Madsen, A. O., Riekel, C., Grothe, R. & Eisenberg, D. (2005). Nature (London), 435, 773-778.
25. Ng, J. D., Stevens, R. C. & Kuhn, P. (2008). In the press.
26. Norrman, M., Hubalek, F. & Schluckebier, G. (2007). Eur. J. Pharm. Sci. 30, 414-423.
27. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
28. Pebay-Peyroula, E., Rummel, G., Rosenbusch, J. P. & Landau, E. M. (1997). Science, 277, 1676-1681.
29. Perrakis, A., Cipriani, F., Castagna, J.-C., Claustre, L., Burghammer, M., Riekel, C. & Cusack, S. (1999). Acta Cryst. D55, 1765-1770.
30. Rasmussen, S. G., Choi, H. J., Rosenbaum, D. M., Kobilka, T. S., Thian, F. S., Edwards, P. C., Burghammer, M., Ratnala, V. R., Sanishvili, R., Fischetti, R. F., Schertler, G. F., Weis, W. I. & Kobilka, B. K. (2007). Nature (London), 450, 383-387.
31. Renault, L., Hanzal-Bayer, M. & Hillig, R. C. (2001). Acta Cryst. D57, 1167-1170.
32. Riekel, C. (2004). J. Synchrotron Rad. 11, 4-6.
33. Sliz, P., Harrison, S. C. & Rosenbaum, G. (2003). Structure, 11, 13-19.
34. Snigirev, A., Bjeoumikhov, A., Erko, A., Snigireva, I., Grigoriev, M., Yunkin, V., Erko, M. & Bjeoumikhova, S. (2007a). J. Synchrotron Rad. 14, 227-228.
35. Snigirev, A., Bjeoumikhov, A., Erko, A., Snigireva, I., Grigoriev, M., Yunkin, V., Erko, M. & Bjeoumikhova, S. (2007b). J. Synchrotron Rad. 14, 326-330.
36. Teng, T. & Moffat, K. (2000). J. Synchrotron Rad. 7, 313-317.
37. Teng, T.-Y. & Moffat, K. (2002). J. Synchrotron Rad. 9, 198-201.
38. Weichenrieder, O., Wild, K., Strub, K. & Cusack, S. (2000). Nature (London), 408, 167-173.
39. Xiao, B., Spencer, J., Clements, A., Ali-Khan, N., Mittnacht, S., Broceno, C., Burghammer, M., Perrakis, A., Marmorstein, R. & Gamblin, S. J. (2003). Proc. Natl Acad. Sci. USA, 100, 2363-2368.