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Volumn 128, Issue 10, 2008, Pages

Classical and quantum mechanical/molecular mechanical molecular dynamics simulations of alanine dipeptide in water: Comparisons with IR and vibrational circular dichroism spectra

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER SIMULATION; DIPOLE MOMENT; MOLECULAR DYNAMICS; POLARIZATION; QUANTUM THEORY; SOLVATION; WATER;

EID: 40849105036     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.2837461     Document Type: Article
Times cited : (78)

References (63)
  • 16
    • 0037431356 scopus 로고    scopus 로고
    • JPCBFK 1089-5647 10.1021/jp026854i.
    • C. F. Weise and J. C. Weisshaar, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp026854i 107, 3265 (2003).
    • (2003) J. Phys. Chem. B , vol.107 , pp. 3265
    • Weise, C.F.1    Weisshaar, J.C.2
  • 20
    • 0034315712 scopus 로고    scopus 로고
    • JPCBFK 1089-5647 10.1021/jp001546a.
    • S. Woutersen and P. Hamm, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp001546a 104, 11316 (2000).
    • (2000) J. Phys. Chem. B , vol.104 , pp. 11316
    • Woutersen, S.1    Hamm, P.2
  • 21
    • 33847087323 scopus 로고
    • JACSAT 0002-7863 10.1021/ja00535a001.
    • V. Madison and K. D. Kopple, J. Am. Chem. Soc. JACSAT 0002-7863 10.1021/ja00535a001 102, 4855 (1980).
    • (1980) J. Am. Chem. Soc. , vol.102 , pp. 4855
    • Madison, V.1    Kopple, K.D.2
  • 23
    • 1842475402 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.1644100.
    • J.-H. Choi and M. Cho, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1644100 120, 4383 (2004).
    • (2004) J. Chem. Phys. , vol.120 , pp. 4383
    • Choi, J.-H.1    Cho, M.2
  • 24
    • 24644503134 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.1997151.
    • S. Hahn, S.-S. Kim, C. Lee, and M. Cho, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1997151 123, 084905 (2005).
    • (2005) J. Chem. Phys. , vol.123 , pp. 084905
    • Hahn, S.1    Kim, S.-S.2    Lee, C.3    Cho, M.4
  • 26
    • 33847696560 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.2428300.
    • A. W. Smith and A. Tokmakoff, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2428300 126, 045109 (2007).
    • (2007) J. Chem. Phys. , vol.126 , pp. 045109
    • Smith, A.W.1    Tokmakoff, A.2
  • 29
    • 33751216142 scopus 로고    scopus 로고
    • JPCBFK 1089-5647 10.1021/jp064795t.
    • T. L. Jansen and J. Knoester, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp064795t 110, 22910 (2006).
    • (2006) J. Phys. Chem. B , vol.110 , pp. 22910
    • Jansen, T.L.1    Knoester, J.2
  • 31
    • 24144440918 scopus 로고    scopus 로고
    • BIOJAU 0006-3495 10.1529/biophysj.104.054130.
    • V. M. Dadarlat, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.104.054130 89, 1433 (2005).
    • (2005) Biophys. J. , vol.89 , pp. 1433
    • Dadarlat, V.M.1
  • 32
    • 15944392908 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.1818046.
    • H. Freedman and T. N. Truong, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1818046 121, 12447 (2004).
    • (2004) J. Chem. Phys. , vol.121 , pp. 12447
    • Freedman, H.1    Truong, T.N.2
  • 34
    • 0001102309 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.479860.
    • P. E. Smith, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.479860 111, 5568 (1999).
    • (1999) J. Chem. Phys. , vol.111 , pp. 5568
    • Smith, P.E.1
  • 35
    • 33751287745 scopus 로고    scopus 로고
    • JPCBFK 1089-5647.
    • Y. K. Kang, J. Phys. Chem. B JPCBFK 1089-5647 110, 21338 (2006).
    • (2006) J. Phys. Chem. B , vol.110 , pp. 21338
    • Kang, Y.K.1
  • 37
    • 0037441479 scopus 로고    scopus 로고
    • 18PLAF 0887-3585 10.1002/prot.10279.
    • H. Hu, M. Elstner, and J. Hermans, Proteins 18PLAF 0887-3585 10.1002/prot.10279 50, 451 (2003).
    • (2003) Proteins , vol.50 , pp. 451
    • Hu, H.1    Elstner, M.2    Hermans, J.3
  • 38
    • 0037162186 scopus 로고    scopus 로고
    • JPCBFK 1089-5647 10.1021/jp013977e.
    • Y. Mu and G. Stock, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp013977e 106, 5294 (2002).
    • (2002) J. Phys. Chem. B , vol.106 , pp. 5294
    • Mu, Y.1    Stock, G.2
  • 39
    • 0038241788 scopus 로고    scopus 로고
    • JPCBFK 1089-5647 10.1021/jp022445a.
    • Y. G. Mu, D. S. Kosov, and G. Stock, J. Phys. Chem. B JPCBFK 1089-5647 10.1021/jp022445a 107, 5064 (2003).
    • (2003) J. Phys. Chem. B , vol.107 , pp. 5064
    • Mu, Y.G.1    Kosov, D.S.2    Stock, G.3
  • 41
    • 84988129057 scopus 로고
    • JCCHDD 0192-8651 10.1002/jcc.540100208.
    • J. J. P. Stewart, J. Comput. Chem. JCCHDD 0192-8651 10.1002/jcc.540100208 10, 209 (1989).
    • (1989) J. Comput. Chem. , vol.10 , pp. 209
    • Stewart, J.J.P.1
  • 42
    • 84988073214 scopus 로고
    • JCCHDD 0192-8651 10.1002/jcc.540100209.
    • J. J. P. Stewart, J. Comput. Chem. JCCHDD 0192-8651 10.1002/jcc.540100209 10, 221 (1989).
    • (1989) J. Comput. Chem. , vol.10 , pp. 221
    • Stewart, J.J.P.1
  • 45
    • 84906391926 scopus 로고
    • MOPHAM 0026-8976 10.1080/00268978500103111.
    • W. L. Jorgensen and J. D. Madura, Mol. Phys. MOPHAM 0026-8976 10.1080/00268978500103111 56, 1381 (1985).
    • (1985) Mol. Phys. , vol.56 , pp. 1381
    • Jorgensen, W.L.1    Madura, J.D.2
  • 46
    • 0000020246 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.481505.
    • M. W. Mahoney and W. L. Jorgensen, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.481505 112, 8910 (2000).
    • (2000) J. Chem. Phys. , vol.112 , pp. 8910
    • Mahoney, M.W.1    Jorgensen, W.L.2
  • 52
    • 33646228036 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.2038889.
    • S. Yang and M. Cho, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.2038889 123, 134503 (2005).
    • (2005) J. Chem. Phys. , vol.123 , pp. 134503
    • Yang, S.1    Cho, M.2
  • 53
    • 33846823909 scopus 로고
    • JCPSA6 0021-9606 10.1063/1.464397.
    • T. Darden, D. York, and L. Pedersen, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.464397 98, 10089 (1993).
    • (1993) J. Chem. Phys. , vol.98 , pp. 10089
    • Darden, T.1    York, D.2    Pedersen, L.3
  • 56
    • 40849092014 scopus 로고
    • Statistical Mechanics (Harper & Row, New York).
    • D. McQuarrie, Statistical Mechanics (Harper & Row, New York, 1976).
    • (1976)
    • McQuarrie, D.1
  • 57
    • 11644266970 scopus 로고
    • JCPSA6 0021-9606 10.1063/1.1740588.
    • R. S. Mulliken, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1740588 23, 1833 (1955).
    • (1955) J. Chem. Phys. , vol.23 , pp. 1833
    • Mulliken, R.S.1
  • 58
    • 40849142792 scopus 로고
    • Principles of Nonlinear Optical Spectroscopy (Oxford University Press, Oxford).
    • S. Mukamel, Principles of Nonlinear Optical Spectroscopy (Oxford University Press, Oxford, 1995).
    • (1995)
    • Mukamel, S.1
  • 61
    • 1142267520 scopus 로고    scopus 로고
    • JCPSA6 0021-9606 10.1063/1.1633549.
    • K. Kwac, H. Lee, and M. Cho, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1633549 120, 1477 (2004).
    • (2004) J. Chem. Phys. , vol.120 , pp. 1477
    • Kwac, K.1    Lee, H.2    Cho, M.3
  • 62
    • 18444412606 scopus 로고    scopus 로고
    • JRSPAF 0377-0486 10.1002/jrs.1303.
    • K. Kwac and M. Cho, J. Raman Spectrosc. JRSPAF 0377-0486 10.1002/jrs.1303 36, 326 (2005).
    • (2005) J. Raman Spectrosc. , vol.36 , pp. 326
    • Kwac, K.1    Cho, M.2


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