-
1
-
-
0029033855
-
Conservation of the sizes of 53 introns and over 100 intronic sequences for the binding of common transcription factors in the human and mouse genes for type II procollagen (COL2A1)
-
Ala-Kokko L., Kvist A.P., Metsaranta M., Kivirikko K.I., de Crombrugghe B., Prockop D.J., and Vuorio E. Conservation of the sizes of 53 introns and over 100 intronic sequences for the binding of common transcription factors in the human and mouse genes for type II procollagen (COL2A1). Biochem. J. 308 Pt 3 (1995) 923-929
-
(1995)
Biochem. J.
, vol.308
, Issue.PART 3
, pp. 923-929
-
-
Ala-Kokko, L.1
Kvist, A.P.2
Metsaranta, M.3
Kivirikko, K.I.4
de Crombrugghe, B.5
Prockop, D.J.6
Vuorio, E.7
-
2
-
-
0036178401
-
A novel gain-of-function mutation of the integrin alpha2 VWFA domain
-
Aquilina A., Korda M., Bergelson J.M., Humphries M.J., Farndale R.W., and Tuckwell D. A novel gain-of-function mutation of the integrin alpha2 VWFA domain. Eur. J. Biochem. 269 (2002) 1136-1144
-
(2002)
Eur. J. Biochem.
, vol.269
, pp. 1136-1144
-
-
Aquilina, A.1
Korda, M.2
Bergelson, J.M.3
Humphries, M.J.4
Farndale, R.W.5
Tuckwell, D.6
-
3
-
-
0029006870
-
The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm
-
Atkin A.L., Altamura N., Leeds P., and Culbertson M.R. The majority of yeast UPF1 co-localizes with polyribosomes in the cytoplasm. Mol. Biol. Cell 6 (1995) 611-625
-
(1995)
Mol. Biol. Cell
, vol.6
, pp. 611-625
-
-
Atkin, A.L.1
Altamura, N.2
Leeds, P.3
Culbertson, M.R.4
-
4
-
-
0004270170
-
-
Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl D. (Eds), John Wiley and Sons, Inc., New York
-
In: Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., and Struhl D. (Eds). Current Protocols in Molecular Biology (1991), John Wiley and Sons, Inc., New York
-
(1991)
Current Protocols in Molecular Biology
-
-
-
5
-
-
24644493193
-
Sequence conservation, relative isoform frequencies, and nonsense-mediated decay in evolutionarily conserved alternative splicing
-
Baek D., and Green P. Sequence conservation, relative isoform frequencies, and nonsense-mediated decay in evolutionarily conserved alternative splicing. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 12813-12818
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 12813-12818
-
-
Baek, D.1
Green, P.2
-
6
-
-
0036023947
-
Intranuclear degradation of nonsense codon-containing mRNA
-
Buhler M., Wilkinson M.F., and Muhlemann O. Intranuclear degradation of nonsense codon-containing mRNA. EMBO Rep. 3 (2002) 646-651
-
(2002)
EMBO Rep.
, vol.3
, pp. 646-651
-
-
Buhler, M.1
Wilkinson, M.F.2
Muhlemann, O.3
-
7
-
-
0001468848
-
Splicing of precursors to mRNAs by the spliceosomes
-
Cech T., et al. (Ed), Cold Spring Harbor Press, Cold Spring Harbor
-
Burge C.B., Tuschl T., and Sharp P.A. Splicing of precursors to mRNAs by the spliceosomes. In: Cech T., et al. (Ed). The RNA World (1999), Cold Spring Harbor Press, Cold Spring Harbor 525-560
-
(1999)
The RNA World
, pp. 525-560
-
-
Burge, C.B.1
Tuschl, T.2
Sharp, P.A.3
-
8
-
-
0042242582
-
ESEfinder: a web resource to identify exonic splicing enhancers
-
Cartegni L., Wang J., Zhu Z., Zhang M.Q., and Krainer A.R. ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res. 31 (2003) 3568-3571
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3568-3571
-
-
Cartegni, L.1
Wang, J.2
Zhu, Z.3
Zhang, M.Q.4
Krainer, A.R.5
-
9
-
-
0032837376
-
Nonsense-mediated mRNA decay in health and disease
-
Frischmeyer P.A., and Dietz H.C. Nonsense-mediated mRNA decay in health and disease. Hum. Mol. Genet. 8 (1999) 1893-1900
-
(1999)
Hum. Mol. Genet.
, vol.8
, pp. 1893-1900
-
-
Frischmeyer, P.A.1
Dietz, H.C.2
-
10
-
-
0037012541
-
Chordin-like CR domains and the regulation of evolutionarily conserved extracellular signaling systems
-
Garcia Abreu J., Coffinier C., Larrain J., Oelgeschlager M., and De Robertis E.M. Chordin-like CR domains and the regulation of evolutionarily conserved extracellular signaling systems. Gene 287 (2002) 39-47
-
(2002)
Gene
, vol.287
, pp. 39-47
-
-
Garcia Abreu, J.1
Coffinier, C.2
Larrain, J.3
Oelgeschlager, M.4
De Robertis, E.M.5
-
11
-
-
0028075476
-
Modulation of extracellular matrix gene expression in bovine high density chondrocyte cultures by ascorbic acid and enzymatic resuspension
-
Hering T.M., Kollar J., Huynh T.D., Varelas J.B., and Sandell L.J. Modulation of extracellular matrix gene expression in bovine high density chondrocyte cultures by ascorbic acid and enzymatic resuspension. Arch. Biochem. Biophys. 314 (1994) 90-98
-
(1994)
Arch. Biochem. Biophys.
, vol.314
, pp. 90-98
-
-
Hering, T.M.1
Kollar, J.2
Huynh, T.D.3
Varelas, J.B.4
Sandell, L.J.5
-
12
-
-
4043147850
-
Characterization and chondrocyte differentiation stage-specific expression of KRAB zinc-finger protein gene ZNF470
-
Hering T.M., Kazmi N.H., Huynh T.D., Kollar J., Xu L., Hunyady A.B., and Johnstone B. Characterization and chondrocyte differentiation stage-specific expression of KRAB zinc-finger protein gene ZNF470. Exp. Cell Res. 299 (2004) 137-147
-
(2004)
Exp. Cell Res.
, vol.299
, pp. 137-147
-
-
Hering, T.M.1
Kazmi, N.H.2
Huynh, T.D.3
Kollar, J.4
Xu, L.5
Hunyady, A.B.6
Johnstone, B.7
-
13
-
-
33746556526
-
Polyamine-regulated unproductive splicing and translation of spermidine/spermine N1-acetyltransferase
-
Hyvonen M.T., Uimari A., Keinanen T.A., Heikkinen S., Pellinen R., Wahlfors T., Korhonen A., Narvanen A., Wahlfors J., Alhonen L., and Janne J. Polyamine-regulated unproductive splicing and translation of spermidine/spermine N1-acetyltransferase. RNA 12 (2006) 1569-1582
-
(2006)
RNA
, vol.12
, pp. 1569-1582
-
-
Hyvonen, M.T.1
Uimari, A.2
Keinanen, T.A.3
Heikkinen, S.4
Pellinen, R.5
Wahlfors, T.6
Korhonen, A.7
Narvanen, A.8
Wahlfors, J.9
Alhonen, L.10
Janne, J.11
-
14
-
-
0347287038
-
Proline to arginine mutations in FGF receptors 1 and 3 result in Pfeiffer and Muenke craniosynostosis syndromes through enhancement of FGF binding affinity
-
Ibrahimi O.A., Zhang F., Eliseenkova A.V., Linhardt R.J., and Mohammadi M. Proline to arginine mutations in FGF receptors 1 and 3 result in Pfeiffer and Muenke craniosynostosis syndromes through enhancement of FGF binding affinity. Hum. Mol. Genet. 13 (2004) 69-78
-
(2004)
Hum. Mol. Genet.
, vol.13
, pp. 69-78
-
-
Ibrahimi, O.A.1
Zhang, F.2
Eliseenkova, A.V.3
Linhardt, R.J.4
Mohammadi, M.5
-
15
-
-
0031817577
-
In vitro chondrogenesis of bone marrow-derived mesenchymal progenitor cells
-
Johnstone B., Hering T.M., Caplan A.I., Goldberg V.M., and Yoo J.U. In vitro chondrogenesis of bone marrow-derived mesenchymal progenitor cells. Exp. Cell Res. 238 (1998) 265-272
-
(1998)
Exp. Cell Res.
, vol.238
, pp. 265-272
-
-
Johnstone, B.1
Hering, T.M.2
Caplan, A.I.3
Goldberg, V.M.4
Yoo, J.U.5
-
16
-
-
0035830918
-
The nonsense-mediated decay pathway and mutually exclusive expression of alternatively spliced FGFR2IIIb and -IIIc mRNAs
-
Jones R.B., Wang F., Luo Y., Yu C., Jin C., Suzuki T., Kan M., and McKeehan W.L. The nonsense-mediated decay pathway and mutually exclusive expression of alternatively spliced FGFR2IIIb and -IIIc mRNAs. J. Biol. Chem. 276 (2001) 4158-4167
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 4158-4167
-
-
Jones, R.B.1
Wang, F.2
Luo, Y.3
Yu, C.4
Jin, C.5
Suzuki, T.6
Kan, M.7
McKeehan, W.L.8
-
17
-
-
0037439397
-
Nonsense mediated decay downregulates conserved alternatively spliced ABCC4 transcripts bearing nonsense codons
-
Lamba J.K., Adachi M., Sun D., Tammur J., Schuetz E.G., Allikmets R., and Schuetz J.D. Nonsense mediated decay downregulates conserved alternatively spliced ABCC4 transcripts bearing nonsense codons. Hum. Mol. Genet. 12 (2003) 99-109
-
(2003)
Hum. Mol. Genet.
, vol.12
, pp. 99-109
-
-
Lamba, J.K.1
Adachi, M.2
Sun, D.3
Tammur, J.4
Schuetz, E.G.5
Allikmets, R.6
Schuetz, J.D.7
-
19
-
-
0034010982
-
BMP-binding modules in chordin: a model for signalling regulation in the extracellular space
-
Larrain J., Bachiller D., Lu B., Agius E., Piccolo S., and De Robertis E.M. BMP-binding modules in chordin: a model for signalling regulation in the extracellular space. Development 127 (2000) 821-830
-
(2000)
Development
, vol.127
, pp. 821-830
-
-
Larrain, J.1
Bachiller, D.2
Lu, B.3
Agius, E.4
Piccolo, S.5
De Robertis, E.M.6
-
20
-
-
0037855703
-
TIA-1 or TIAR is required for DT40 cell viability
-
Le Guiner C., Gesnel M.C., and Breathnach R. TIA-1 or TIAR is required for DT40 cell viability. J. Biol. Chem. 278 (2003) 10465-10476
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 10465-10476
-
-
Le Guiner, C.1
Gesnel, M.C.2
Breathnach, R.3
-
21
-
-
19344366251
-
Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells
-
Lejeune F., and Maquat L.E. Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells. Curr. Opin. Cell Biol. 17 (2005) 309-315
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 309-315
-
-
Lejeune, F.1
Maquat, L.E.2
-
22
-
-
0037422575
-
Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
-
Lewis B.P., Green R.E., and Brenner S.E. Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 189-192
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 189-192
-
-
Lewis, B.P.1
Green, R.E.2
Brenner, S.E.3
-
23
-
-
0029078901
-
Tissue-specific and differential expression of alternatively spliced alpha 1(II) collagen mRNAs in early human embryos
-
Lui V.C., Ng L.J., Nicholls J., Tam P.P., and Cheah K.S. Tissue-specific and differential expression of alternatively spliced alpha 1(II) collagen mRNAs in early human embryos. Dev. Dyn. 203 (1995) 198-211
-
(1995)
Dev. Dyn.
, vol.203
, pp. 198-211
-
-
Lui, V.C.1
Ng, L.J.2
Nicholls, J.3
Tam, P.P.4
Cheah, K.S.5
-
24
-
-
25444449878
-
Alternative splicing of type II procollagen exon 2 is regulated by the combination of a weak 5′ splice site and an adjacent intronic stem-loop cis element
-
McAlinden A., Havlioglu N., Liang L., Davies S.R., and Sandell L.J. Alternative splicing of type II procollagen exon 2 is regulated by the combination of a weak 5′ splice site and an adjacent intronic stem-loop cis element. J. Biol. Chem. 280 (2005) 32700-32711
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 32700-32711
-
-
McAlinden, A.1
Havlioglu, N.2
Liang, L.3
Davies, S.R.4
Sandell, L.J.5
-
25
-
-
0036337915
-
A genomic view of alternative splicing
-
Modrek B., and Lee C. A genomic view of alternative splicing. Nat. Genet. 30 (2002) 13-19
-
(2002)
Nat. Genet.
, vol.30
, pp. 13-19
-
-
Modrek, B.1
Lee, C.2
-
26
-
-
0030931561
-
smg mutants affect the expression of alternatively spliced SR protein mRNAs in Caenorhabditis elegans
-
Morrison M., Harris K.S., and Roth M.B. smg mutants affect the expression of alternatively spliced SR protein mRNAs in Caenorhabditis elegans. Proc. Natl. Acad. Sci. U. S. A. 94 (1997) 9782-9785
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 9782-9785
-
-
Morrison, M.1
Harris, K.S.2
Roth, M.B.3
-
27
-
-
0027420497
-
Preferential expression of alternatively spliced mRNAs encoding type II procollagen with a cysteine-rich amino-propeptide in differentiating cartilage and nonchondrogenic tissues during early mouse development
-
Ng L.J., Tam P.P., and Cheah K.S. Preferential expression of alternatively spliced mRNAs encoding type II procollagen with a cysteine-rich amino-propeptide in differentiating cartilage and nonchondrogenic tissues during early mouse development. Dev. Biol. 159 (1993) 403-417
-
(1993)
Dev. Biol.
, vol.159
, pp. 403-417
-
-
Ng, L.J.1
Tam, P.P.2
Cheah, K.S.3
-
28
-
-
0030660633
-
Type IIA procollagen amino propeptide is localized in human embryonic tissues
-
Oganesian A., Zhu Y., and Sandell L.J. Type IIA procollagen amino propeptide is localized in human embryonic tissues. J. Histochem. Cytochem. 45 (1997) 1469-1480
-
(1997)
J. Histochem. Cytochem.
, vol.45
, pp. 1469-1480
-
-
Oganesian, A.1
Zhu, Y.2
Sandell, L.J.3
-
29
-
-
30944449484
-
Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression
-
Pan Q., Saltzman A.L., Kim Y.K., Misquitta C., Shai O., Maquat L.E., Frey B.J., and Blencowe B.J. Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression. Genes Dev. 20 (2006) 153-158
-
(2006)
Genes Dev.
, vol.20
, pp. 153-158
-
-
Pan, Q.1
Saltzman, A.L.2
Kim, Y.K.3
Misquitta, C.4
Shai, O.5
Maquat, L.E.6
Frey, B.J.7
Blencowe, B.J.8
-
30
-
-
0025346774
-
Differential expression of a cysteine-rich domain in the amino-terminal propeptide of type II (cartilage) procollagen by alternative splicing of mRNA
-
Ryan M.C., and Sandell L.J. Differential expression of a cysteine-rich domain in the amino-terminal propeptide of type II (cartilage) procollagen by alternative splicing of mRNA. J. Biol. Chem. 265 (1990) 10334-10339
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 10334-10339
-
-
Ryan, M.C.1
Sandell, L.J.2
-
31
-
-
0028343784
-
Alternative splice form of type II procollagen mRNA (IIA) is predominant in skeletal precursors and non-cartilaginous tissues during early mouse development
-
Sandell L.J., Nalin A.M., and Reife R.A. Alternative splice form of type II procollagen mRNA (IIA) is predominant in skeletal precursors and non-cartilaginous tissues during early mouse development. Dev. Dyn. 199 (1994) 129-140
-
(1994)
Dev. Dyn.
, vol.199
, pp. 129-140
-
-
Sandell, L.J.1
Nalin, A.M.2
Reife, R.A.3
-
32
-
-
0028126035
-
Secondary structure within PCR target sequences may facilitate heteroduplex production
-
Separovic E., and Nadin-Davis S.A. Secondary structure within PCR target sequences may facilitate heteroduplex production. PCR Methods Appl. 3 (1994) 248-251
-
(1994)
PCR Methods Appl.
, vol.3
, pp. 248-251
-
-
Separovic, E.1
Nadin-Davis, S.A.2
-
33
-
-
0036927671
-
Defects in pre-mRNA processing as causes of and predisposition to diseases
-
Stoilov P., Meshorer E., Gencheva M., Glick D., Soreq H., and Stamm S. Defects in pre-mRNA processing as causes of and predisposition to diseases. DNA Cell Biol. 21 (2002) 803-818
-
(2002)
DNA Cell Biol.
, vol.21
, pp. 803-818
-
-
Stoilov, P.1
Meshorer, E.2
Gencheva, M.3
Glick, D.4
Soreq, H.5
Stamm, S.6
-
34
-
-
0024331684
-
Nucleotide sequence of the full length cDNA encoding for human type II procollagen
-
Su M.W., Lee B., Ramirez F., Machado M., and Horton W. Nucleotide sequence of the full length cDNA encoding for human type II procollagen. Nucleic Acids Res. 17 22 (1989) 9473
-
(1989)
Nucleic Acids Res.
, vol.17
, Issue.22
, pp. 9473
-
-
Su, M.W.1
Lee, B.2
Ramirez, F.3
Machado, M.4
Horton, W.5
-
35
-
-
0035794679
-
SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs
-
Sureau A., Gattoni R., Dooghe Y., Stevenin J., and Soret J. SC35 autoregulates its expression by promoting splicing events that destabilize its mRNAs. EMBO J. 20 (2001) 1785-1796
-
(2001)
EMBO J.
, vol.20
, pp. 1785-1796
-
-
Sureau, A.1
Gattoni, R.2
Dooghe, Y.3
Stevenin, J.4
Soret, J.5
-
36
-
-
0041511925
-
Determination of the complete cDNA sequence of rat type II collagen and evaluation of distinct expression patterns of types IIA and IIB procollagen mRNAs during fracture repair in rats
-
Urabe K., Kim H.J., Sarkar G., Bronk J.T., and Bolander M.E. Determination of the complete cDNA sequence of rat type II collagen and evaluation of distinct expression patterns of types IIA and IIB procollagen mRNAs during fracture repair in rats. J. Orthop. Sci. 8 (2003) 585-590
-
(2003)
J. Orthop. Sci.
, vol.8
, pp. 585-590
-
-
Urabe, K.1
Kim, H.J.2
Sarkar, G.3
Bronk, J.T.4
Bolander, M.E.5
-
37
-
-
0033012032
-
Regulation of AUF1 expression via conserved alternatively spliced elements in the 3′ untranslated region
-
Wilson G.M., Sun Y., Sellers J., Lu H., Penkar N., Dillard G., and Brewer G. Regulation of AUF1 expression via conserved alternatively spliced elements in the 3′ untranslated region. Mol. Cell. Biol. 19 (1999) 4056-4064
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 4056-4064
-
-
Wilson, G.M.1
Sun, Y.2
Sellers, J.3
Lu, H.4
Penkar, N.5
Dillard, G.6
Brewer, G.7
-
38
-
-
0346124413
-
Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay
-
Wollerton M.C., Gooding C., Wagner E.J., Garcia-Blanco M.A., and Smith C.W. Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay. Mol. Cell 13 (2004) 91-100
-
(2004)
Mol. Cell
, vol.13
, pp. 91-100
-
-
Wollerton, M.C.1
Gooding, C.2
Wagner, E.J.3
Garcia-Blanco, M.A.4
Smith, C.W.5
-
39
-
-
0032425950
-
The chondrogenic potential of human bone-marrow-derived mesenchymal progenitor cells
-
Yoo J.U., Barthel T.S., Nishimura K., Solchaga L., Caplan A.I., Goldberg V.M., and Johnstone B. The chondrogenic potential of human bone-marrow-derived mesenchymal progenitor cells. J. Bone Jt. Surg., Am. 80 (1998) 1745-1757
-
(1998)
J. Bone Jt. Surg., Am.
, vol.80
, pp. 1745-1757
-
-
Yoo, J.U.1
Barthel, T.S.2
Nishimura, K.3
Solchaga, L.4
Caplan, A.I.5
Goldberg, V.M.6
Johnstone, B.7
-
40
-
-
34249698652
-
Impact of aging on rat bone marrow-derived stem cell chondrogenesis
-
Zheng H., Martin J.A., Duwayri Y., Falcon G., and Buckwalter J.A. Impact of aging on rat bone marrow-derived stem cell chondrogenesis. J. Gerontol., Ser. A, Biol. Sci. Med. Sci. 62 (2007) 136-148
-
(2007)
J. Gerontol., Ser. A, Biol. Sci. Med. Sci.
, vol.62
, pp. 136-148
-
-
Zheng, H.1
Martin, J.A.2
Duwayri, Y.3
Falcon, G.4
Buckwalter, J.A.5
-
41
-
-
0033535331
-
Type IIA procollagen containing the cysteine-rich amino propeptide is deposited in the extracellular matrix of prechondrogenic tissue and binds to TGF-beta1 and BMP-2
-
Zhu Y., Oganesian A., Keene D.R., and Sandell L.J. Type IIA procollagen containing the cysteine-rich amino propeptide is deposited in the extracellular matrix of prechondrogenic tissue and binds to TGF-beta1 and BMP-2. J. Cell Biol. 144 (1999) 1069-1080
-
(1999)
J. Cell Biol.
, vol.144
, pp. 1069-1080
-
-
Zhu, Y.1
Oganesian, A.2
Keene, D.R.3
Sandell, L.J.4
|